| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX534341 |
Definition |
Escherichia phage Pride, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dhillonvirus; unclassified Dhillonvirus. |
DB of origin |
NUCCORE |
Length |
44899 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
63 |
%GC |
54.46 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ANY30009.1 | KX534341_p4 | hypothetical protein | phrog_1965 | unknown function | unknown function | -1 | 714 | 1478 |
| ANY30063.1 | KX534341_p58 | hypothetical protein | phrog_11068 | unknown function | unknown function | 1 | 38580 | 38741 |
| ANY30036.1 | KX534341_p31 | hypothetical protein | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 22365 | 22688 |
| ANY30060.1 | KX534341_p55 | hypothetical protein | phrog_2359 | holin | lysis | 1 | 37553 | 37843 |
| ANY30014.1 | KX534341_p9 | hypothetical protein | phrog_161 | head closure Hc1 | connector | 1 | 4194 | 4547 |
| ANY30026.1 | KX534341_p21 | hypothetical protein | phrog_557 | outer membrane protein | other | 1 | 16347 | 16649 |
| ANY30064.1 | KX534341_p59 | hypothetical protein | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | 1 | 38837 | 39979 |
| ANY30012.1 | KX534341_p7 | hypothetical protein | phrog_477 | head-tail adaptor Ad1 | connector | 1 | 3589 | 4089 |
| ANY30029.1 | KX534341_p24 | tail fibers protein | phrog_1980 | tail fiber protein | tail | 1 | 17642 | 19420 |
| ANY30038.1 | KX534341_p33 | DNA helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 23377 | 24801 |
| ANY30042.1 | KX534341_p37 | hypothetical protein | phrog_1035 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 25557 | 26159 |
| ANY30035.1 | KX534341_p30 | hypothetical protein | phrog_10530 | DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 21819 | 22283 |
| ANY30033.1 | KX534341_p28 | hypothetical protein | phrog_10685 | unknown function | unknown function | -1 | 21142 | 21366 |
| ANY30039.1 | KX534341_p34 | hypothetical protein | phrog_9291 | unknown function | unknown function | -1 | 24806 | 25024 |
| ANY30053.1 | KX534341_p48 | hypothetical protein | phrog_23498 | unknown function | unknown function | 1 | 35697 | 35810 |
| ANY30055.1 | KX534341_p50 | hypothetical protein | phrog_12533 | unknown function | unknown function | 1 | 36122 | 36391 |
| ANY30020.1 | KX534341_p15 | tail length tape-measure protein 1 | phrog_24 | tail length tape measure protein | tail | 1 | 7482 | 10124 |
| ANY30041.1 | KX534341_p36 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 25282 | 25560 |
| ANY30025.1 | KX534341_p20 | tail fiber protein | phrog_31 | central tail fiber J | tail | 1 | 12891 | 16310 |
| ANY30065.1 | KX534341_p60 | hypothetical protein | phrog_3064 | terminase | head and packaging | 1 | 40109 | 40660 |
| ANY30040.1 | KX534341_p35 | hypothetical protein | phrog_5558 | Lar-like restriction alleviation protein | moron, auxiliary metabolic gene and host takeover | -1 | 25068 | 25241 |
| ANY30058.1 | KX534341_p53 | hypothetical protein | phrog_13628 | unknown function | unknown function | 1 | 37088 | 37228 |
| ANY30024.1 | KX534341_p19 | tail assembly protein | phrog_32 | tail assembly protein | tail | 1 | 12277 | 12894 |
| ANY30046.1 | KX534341_p41 | hypothetical protein | phrog_11211 | unknown function | unknown function | -1 | 29616 | 29858 |
| ANY30037.1 | KX534341_p32 | hypothetical protein | phrog_757 | DNA methyltransferase | other | -1 | 22685 | 23380 |
| ANY30051.1 | KX534341_p46 | hypothetical protein | phrog_9366 | transposase | integration and excision | 1 | 32669 | 32998 |
| ANY30047.1 | KX534341_p42 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 29851 | 31281 |
| ANY30007.1 | KX534341_p2 | hypothetical protein | phrog_2536 | Rz-like spanin | lysis | 1 | 228 | 566 |
| ANY30028.1 | KX534341_p23 | super-infection exclusion protein | phrog_1119 | Cor superinfection exclusion protein | moron, auxiliary metabolic gene and host takeover | -1 | 17343 | 17561 |
| ANY30017.1 | KX534341_p12 | major tail protein | phrog_584 | major tail protein | tail | 1 | 5625 | 6350 |
| ANY30048.1 | KX534341_p43 | hypothetical protein | phrog_9934 | unknown function | unknown function | -1 | 31281 | 31460 |
| ANY30059.1 | KX534341_p54 | hypothetical protein | phrog_2531 | unknown function | unknown function | 1 | 37213 | 37500 |
| ANY30049.1 | KX534341_p44 | hypothetical protein | phrog_4965 | unknown function | unknown function | -1 | 31460 | 31711 |
| ANY30034.1 | KX534341_p29 | DNA methylase | phrog_111 | DNA methyltransferase | other | -1 | 21347 | 21745 |
| ANY30022.1 | KX534341_p17 | minor tail protein | phrog_18 | minor tail protein | tail | 1 | 10755 | 11543 |
| ANY30056.1 | KX534341_p51 | hypothetical protein | phrog_15977 | unknown function | unknown function | 1 | 36388 | 36540 |
| ANY30023.1 | KX534341_p18 | tail assembly protein | phrog_30 | minor tail protein | tail | 1 | 11546 | 12286 |
| ANY30008.1 | KX534341_p3 | hypothetical protein | phrog_5672 | Rz-like spanin | lysis | 1 | 541 | 699 |
| ANY30052.1 | KX534341_p47 | DNA primase/helicase | phrog_3228 | replicative helicase-primase | DNA, RNA and nucleotide metabolism | 1 | 33009 | 35273 |
| ANY30057.1 | KX534341_p52 | hypothetical protein | phrog_10243 | unknown function | unknown function | 1 | 36537 | 37091 |
| ANY30050.1 | KX534341_p45 | hypothetical protein | phrog_3127 | unknown function | unknown function | -1 | 31760 | 32266 |
| ANY30027.1 | KX534341_p22 | hypothetical protein | phrog_425 | membrane associated protein | moron, auxiliary metabolic gene and host takeover | 1 | 16649 | 17323 |
| ANY30016.1 | KX534341_p11 | hypothetical protein | phrog_179 | tail terminator | connector | 1 | 5142 | 5564 |
| ANY30054.1 | KX534341_p49 | hypothetical protein | phrog_9839 | unknown function | unknown function | 1 | 35807 | 36112 |
| ANY30031.1 | KX534341_p26 | hypothetical protein | phrog_9871 | unknown function | unknown function | -1 | 20062 | 20616 |
| ANY30006.1 | KX534341_p1 | capsid and scaffold protein | singleton | unknown function | unknown function | 1 | 152 | 265 |
| ANY30032.1 | KX534341_p27 | hypothetical protein | phrog_415 | polynucleotide kinase | other | -1 | 20630 | 21145 |
| ANY30030.1 | KX534341_p25 | hypothetical protein | phrog_10558 | unknown function | unknown function | -1 | 19444 | 20019 |
| ANY30021.1 | KX534341_p16 | minor tail protein | phrog_9922 | minor tail protein | tail | 1 | 10102 | 10758 |
| ANY30067.1 | KX534341_p62 | minor tail protein | phrog_145 | portal protein | head and packaging | 1 | 42056 | 43576 |
| ANY30044.1 | KX534341_p39 | hypothetical protein | phrog_10102 | unknown function | unknown function | -1 | 28514 | 28684 |
| ANY30062.1 | KX534341_p57 | lysin | phrog_7 | endolysin | lysis | 1 | 38129 | 38563 |
| ANY30061.1 | KX534341_p56 | hypothetical protein | phrog_2508 | holin | lysis | 1 | 37840 | 38085 |
| ANY30068.1 | KX534341_p63 | capsid and scaffold protein | phrog_241 | head morphogenesis | head and packaging | 1 | 43596 | 44663 |
| ANY30066.1 | KX534341_p61 | terminase | phrog_2 | terminase large subunit | head and packaging | 1 | 40660 | 42045 |
| ANY30015.1 | KX534341_p10 | hypothetical protein | phrog_169 | tail completion or Neck1 protein | connector | 1 | 4549 | 5142 |
| ANY30019.1 | KX534341_p14 | hypothetical protein | phrog_14875 | unknown function | unknown function | 1 | 6980 | 7099 |
| ANY30043.1 | KX534341_p38 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 26226 | 28517 |
| ANY30013.1 | KX534341_p8 | hypothetical protein | phrog_11158 | unknown function | unknown function | 1 | 4073 | 4207 |
| ANY30045.1 | KX534341_p40 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 28743 | 29525 |
| ANY30011.1 | KX534341_p6 | hypothetical protein | phrog_247 | major head protein | head and packaging | 1 | 2430 | 3530 |
| ANY30018.1 | KX534341_p13 | hypothetical protein | phrog_569 | tail length tape measure protein | tail | 1 | 6420 | 6782 |
| ANY30010.1 | KX534341_p5 | hypothetical protein | phrog_206 | head scaffolding protein | head and packaging | 1 | 1628 | 2332 |