Genomic map of Streptococcus phage SpGS-1 (KX550065)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX550065
Definition
Streptococcus phage SpGS-1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
37631
Host Name
Streptococcus pneumoniae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
53
%GC
38.27
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AOQ27432.1 KX550065_p33 minor capsid protein phrog_533 portal protein head and packaging 1 17265 18833
AOQ27441.1 KX550065_p42 minor capsid protein 3 phrog_913 minor head protein head and packaging 1 23172 23579
AOQ27404.1 KX550065_p5 Cro repressor phrog_3 transcriptional repressor transcription regulation 1 2858 3052
AOQ27433.1 KX550065_p34 hypothetical protein phrog_3755 unknown function unknown function 1 18820 18993
AOQ27419.1 KX550065_p20 hypothetical protein phrog_834 unknown function unknown function 1 10215 10529
AOQ27450.1 KX550065_p51 holin 1 phrog_199 holin lysis 1 35797 36213
AOQ27444.1 KX550065_p45 hypothetical protein phrog_706 unknown function unknown function 1 24591 25160
AOQ27401.1 KX550065_p2 hypothetical protein phrog_9859 unknown function unknown function -1 1445 1819
AOQ27439.1 KX550065_p40 minor capsid protein 1 phrog_793 head-tail adaptor connector 1 22457 22828
AOQ27438.1 KX550065_p39 hypothetical protein phrog_541 head-tail adaptor connector 1 22075 22467
AOQ27413.1 KX550065_p14 C5 cytosine methyltransferase phrog_116 DNA methyltransferase other 1 7729 8862
AOQ27412.1 KX550065_p13 ssDNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 7128 7703
AOQ27422.1 KX550065_p23 hypothetical protein phrog_884 unknown function unknown function 1 11204 11464
AOQ27417.1 KX550065_p18 crossover junction endodeoxyribonuclease RusA-like protein phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 9556 9957
AOQ27445.1 KX550065_p46 tail-length tape measure protein phrog_1686 tail length tape measure protein tail 1 25153 28434
AOQ27451.1 KX550065_p52 holin 2 phrog_608 holin lysis 1 36217 36549
AOQ27429.1 KX550065_p30 hypothetical protein phrog_5057 unknown function unknown function 1 14547 15293
AOQ27420.1 KX550065_p21 hypothetical protein phrog_121 unknown function unknown function 1 10531 11046
AOQ27408.1 KX550065_p9 hypothetical protein phrog_2715 unknown function unknown function 1 4786 5238
AOQ27405.1 KX550065_p6 antirepressor phrog_63 anti-repressor Ant transcription regulation 1 3054 3752
AOQ27440.1 KX550065_p41 minor capsid protein 2 phrog_556 minor head protein head and packaging 1 22828 23172
AOQ27414.1 KX550065_p15 hypothetical protein phrog_3947 unknown function unknown function 1 8906 9109
AOQ27416.1 KX550065_p17 hypothetical protein phrog_774 unknown function unknown function 1 9333 9545
AOQ27452.1 KX550065_p53 autolysin LytA-like protein phrog_1110 endolysin lysis 1 36553 37509
AOQ27436.1 KX550065_p37 major capsid protein phrog_840 major head protein head and packaging 1 20907 21788
AOQ27425.1 KX550065_p26 hypothetical protein phrog_3476 unknown function unknown function 1 12329 12700
AOQ27449.1 KX550065_p50 hypothetical protein phrog_2566 unknown function unknown function 1 35524 35787
AOQ27400.1 KX550065_p1 integrase phrog_1 integrase integration and excision -1 184 1326
AOQ27446.1 KX550065_p47 tail protein phrog_202 distal tail protein Dit tail 1 28431 29945
AOQ27409.1 KX550065_p10 ssDNA-binding protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 5244 5945
AOQ27403.1 KX550065_p4 C1 repressor phrog_8 transcriptional regulator transcription regulation -1 2235 2591
AOQ27442.1 KX550065_p43 major tail shaft protein phrog_820 major tail protein tail 1 23576 24025
AOQ27418.1 KX550065_p19 hypothetical protein phrog_4706 unknown function unknown function 1 9959 10165
AOQ27410.1 KX550065_p11 hypothetical protein phrog_674 unknown function unknown function 1 5948 6940
AOQ27421.1 KX550065_p22 hypothetical protein phrog_4252 unknown function unknown function 1 11046 11207
AOQ27423.1 KX550065_p24 hypothetical protein phrog_2131 unknown function unknown function 1 11461 11883
AOQ27428.1 KX550065_p29 ParB-like nuclease domain protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 13472 14566
AOQ27406.1 KX550065_p7 DNA-binding protein phrog_1456 DNA binding protein DNA, RNA and nucleotide metabolism 1 3938 4279
AOQ27415.1 KX550065_p16 hypothetical protein phrog_16580 unknown function unknown function 1 9119 9316
AOQ27407.1 KX550065_p8 hypothetical protein phrog_2273 unknown function unknown function 1 4436 4702
AOQ27443.1 KX550065_p44 hypothetical protein phrog_1061 unknown function unknown function 1 24090 24578
AOQ27427.1 KX550065_p28 hypothetical protein phrog_3511 unknown function unknown function 1 13014 13406
AOQ27435.1 KX550065_p36 scaffolding protein phrog_194 head scaffolding protein head and packaging 1 20326 20889
AOQ27448.1 KX550065_p49 structural protein phrog_372 tail protein tail 1 33416 35464
AOQ27434.1 KX550065_p35 minor capsid protein phrog_581 minor head protein head and packaging 1 19036 20187
AOQ27411.1 KX550065_p12 hypothetical protein phrog_4139 unknown function unknown function 1 6962 7138
AOQ27402.1 KX550065_p3 hypothetical protein phrog_87 metallo-protease other -1 1833 2213
AOQ27431.1 KX550065_p32 terminase large subunit phrog_2 terminase large subunit head and packaging 1 15942 17252
AOQ27424.1 KX550065_p25 hypothetical protein phrog_98 unknown function unknown function 1 11895 12332
AOQ27447.1 KX550065_p48 tail protein phrog_588 tail fiber protein and host specificity tail 1 29947 33405
AOQ27426.1 KX550065_p27 hypothetical protein phrog_2003 unknown function unknown function 1 12721 13014
AOQ27437.1 KX550065_p38 hypothetical protein phrog_2910 unknown function unknown function 1 21799 22032
AOQ27430.1 KX550065_p31 hypothetical protein phrog_2412 unknown function unknown function 1 15497 15952