| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX557288 |
Definition |
Rhodococcus phage ChewyVIII, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
69165 |
Host Name |
Rhodococcus erythropolis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
95 |
%GC |
61.8 |
Number of singletons |
43 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AON97482.1 | KX557288_p60 | minor tail protein | phrog_2689 | minor tail protein | tail | 1 | 41681 | 43558 |
| AON97468.1 | KX557288_p46 | head-to-tail connector protein | phrog_12740 | head closure Hc1 | connector | 1 | 27590 | 27994 |
| AON97424.1 | KX557288_p1 | terminase small subunit | phrog_226 | minor tail protein | tail | 1 | 141 | 653 |
| AON97431.1 | KX557288_p8 | hypothetical protein | singleton | unknown function | unknown function | -1 | 2745 | 3257 |
| AON97505.1 | KX557288_p84 | hypothetical protein | phrog_10718 | unknown function | unknown function | -1 | 61891 | 62052 |
| AON97447.1 | KX557288_p25 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13134 | 13346 |
| AON97483.1 | KX557288_p61 | hypothetical protein | phrog_22486 | unknown function | unknown function | 1 | 43555 | 43758 |
| AON97473.1 | KX557288_p51 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31131 | 31463 |
| AON97457.1 | KX557288_p35 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18345 | 19235 |
| AON97495.1 | KX557288_p74 | hypothetical protein | singleton | unknown function | unknown function | -1 | 53582 | 53821 |
| AON97456.1 | KX557288_p34 | tail protein | phrog_819 | tail protein | tail | 1 | 16789 | 18348 |
| AON97435.1 | KX557288_p12 | hypothetical protein | singleton | unknown function | unknown function | -1 | 4412 | 4534 |
| AON97432.1 | KX557288_p9 | hypothetical protein | singleton | unknown function | unknown function | -1 | 3257 | 3613 |
| AON97510.1 | KX557288_p90 | hypothetical protein | singleton | unknown function | unknown function | 1 | 66310 | 66567 |
| AON97496.1 | KX557288_p75 | DNA methylase | phrog_116 | DNA methyltransferase | other | -1 | 53818 | 55068 |
| AON97450.1 | KX557288_p28 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13833 | 14231 |
| AON97486.1 | KX557288_p64 | DNA primase/polymerase | phrog_1156 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 45207 | 47777 |
| AON97441.1 | KX557288_p18 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8612 | 9607 |
| AON97492.1 | KX557288_p71 | hypothetical protein | singleton | unknown function | unknown function | -1 | 52261 | 52455 |
| AON97451.1 | KX557288_p29 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14228 | 14500 |
| AON97484.1 | KX557288_p62 | lysin A | phrog_2998 | endolysin | lysis | 1 | 43758 | 44864 |
| AON97478.1 | KX557288_p56 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 38189 | 39760 |
| AON97452.1 | KX557288_p30 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14493 | 14882 |
| AON97509.1 | KX557288_p88 | hypothetical protein | singleton | unknown function | unknown function | 1 | 65431 | 66030 |
| AON97430.1 | KX557288_p7 | hypothetical protein | singleton | unknown function | unknown function | -1 | 2161 | 2760 |
| AON97518.1 | KX557288_p65 | hypothetical protein | singleton | unknown function | unknown function | -1 | 47785 | 47979 |
| AON97433.1 | KX557288_p10 | hypothetical protein | singleton | unknown function | unknown function | -1 | 3616 | 4167 |
| AON97487.1 | KX557288_p66 | hypothetical protein | phrog_13050 | unknown function | unknown function | -1 | 47989 | 48357 |
| AON97470.1 | KX557288_p48 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 28353 | 28778 |
| AON97485.1 | KX557288_p63 | holin | phrog_6116 | holin | lysis | 1 | 44877 | 45083 |
| AON97448.1 | KX557288_p26 | hypothetical protein | phrog_12539 | unknown function | unknown function | 1 | 13343 | 13582 |
| AON97458.1 | KX557288_p36 | hypothetical protein | phrog_13218 | unknown function | unknown function | 1 | 19244 | 19411 |
| AON97491.1 | KX557288_p70 | DNA polymerase III alpha subunit | phrog_11165 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 49815 | 52283 |
| AON97463.1 | KX557288_p41 | scaffolding protein | phrog_12880 | head scaffolding protein | head and packaging | 1 | 24435 | 25100 |
| AON97429.1 | KX557288_p6 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1590 | 1712 |
| AON97449.1 | KX557288_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13618 | 13836 |
| AON97466.1 | KX557288_p44 | head-to-tail connector protein | phrog_6587 | head-tail connector protein | connector | 1 | 26668 | 27093 |
| AON97426.1 | KX557288_p3 | hypothetical protein | singleton | unknown function | unknown function | 1 | 796 | 1077 |
| AON97493.1 | KX557288_p72 | DNA polymerase III alpha subunit | phrog_7513 | unknown function | unknown function | -1 | 52446 | 53378 |
| AON97477.1 | KX557288_p55 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 37234 | 38175 |
| AON97502.1 | KX557288_p81 | hypothetical protein | singleton | unknown function | unknown function | -1 | 59178 | 59411 |
| AON97443.1 | KX557288_p21 | ribonucleotide-diphosphate reductase | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | 1 | 10098 | 11186 |
| AON97497.1 | KX557288_p76 | hypothetical protein | singleton | unknown function | unknown function | -1 | 55171 | 55998 |
| AON97476.1 | KX557288_p54 | tape measure protein | phrog_6090 | tail length tape measure protein | tail | 1 | 32390 | 37234 |
| AON97462.1 | KX557288_p40 | capsid maturation protease | phrog_1522 | head maturation protease | head and packaging | 1 | 23137 | 24423 |
| AON97439.1 | KX557288_p16 | HTH DNA binding protein | singleton | unknown function | unknown function | 1 | 7993 | 8196 |
| AON97460.1 | KX557288_p38 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 19903 | 21543 |
| AON97488.1 | KX557288_p67 | hypothetical protein | phrog_478 | site-specific recombination directionality factor RDF | integration and excision | -1 | 48354 | 48737 |
| AON97464.1 | KX557288_p42 | capsid decoration protein | phrog_3583 | head decoration | head and packaging | 1 | 25136 | 25552 |
| AON97508.1 | KX557288_p87 | hypothetical protein | phrog_35561 | unknown function | unknown function | 1 | 64557 | 65429 |
| AON97440.1 | KX557288_p17 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8193 | 8612 |
| AON97513.1 | KX557288_p93 | hypothetical protein | phrog_1915 | unknown function | unknown function | 1 | 67567 | 68139 |
| AON97479.1 | KX557288_p57 | minor tail protein | phrog_4120 | minor tail protein | tail | 1 | 39792 | 40907 |
| AON97425.1 | KX557288_p2 | hypothetical protein | singleton | unknown function | unknown function | 1 | 650 | 799 |
| AON97515.1 | KX557288_p95 | hypothetical protein | singleton | unknown function | unknown function | 1 | 68741 | 68905 |
| AON97434.1 | KX557288_p11 | hypothetical protein | singleton | unknown function | unknown function | -1 | 4164 | 4412 |
| AON97437.1 | KX557288_p14 | HTH DNA binding protein | singleton | unknown function | unknown function | -1 | 5250 | 6023 |
| AON97489.1 | KX557288_p68 | HTH DNA binding protein | phrog_1729 | unknown function | unknown function | -1 | 48734 | 49114 |
| AON97501.1 | KX557288_p80 | endonuclease | phrog_1218 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 57982 | 59181 |
| AON97453.1 | KX557288_p31 | thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 14882 | 15733 |
| AON97481.1 | KX557288_p59 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41350 | 41691 |
| AON97503.1 | KX557288_p82 | hypothetical protein | singleton | unknown function | unknown function | -1 | 59408 | 59608 |
| AON97444.1 | KX557288_p22 | hypothetical protein | singleton | unknown function | unknown function | 1 | 11186 | 11500 |
| AON97427.1 | KX557288_p4 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1074 | 1211 |
| AON97467.1 | KX557288_p45 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 27135 | 27593 |
| AON97506.1 | KX557288_p85 | hypothetical protein | phrog_12059 | unknown function | unknown function | -1 | 62099 | 63301 |
| AON97461.1 | KX557288_p39 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 21579 | 23150 |
| AON97446.1 | KX557288_p24 | hypothetical protein | singleton | unknown function | unknown function | 1 | 12118 | 13134 |
| AON97455.1 | KX557288_p33 | hypothetical protein | phrog_6439 | unknown function | unknown function | 1 | 16531 | 16761 |
| AON97517.1 | KX557288_p89 | hypothetical protein | singleton | unknown function | unknown function | 1 | 66027 | 66230 |
| AON97469.1 | KX557288_p47 | head-to-tail connector protein | phrog_12236 | head-tail connector protein | connector | 1 | 27994 | 28353 |
| AON97465.1 | KX557288_p43 | major capsid protein | phrog_29 | major head protein | head and packaging | 1 | 25603 | 26664 |
| AON97459.1 | KX557288_p37 | HNH endonuclease | phrog_7785 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 19408 | 19836 |
| AON97442.1 | KX557288_p19 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9607 | 9786 |
| AON97428.1 | KX557288_p5 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1225 | 1590 |
| AON97504.1 | KX557288_p83 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 59662 | 61890 |
| AON97471.1 | KX557288_p49 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 28800 | 29486 |
| AON97494.1 | KX557288_p73 | hypothetical protein | singleton | unknown function | unknown function | -1 | 53379 | 53585 |
| AON97454.1 | KX557288_p32 | nucleoside triphosphate pyrophosphohydrolase | phrog_3301 | pyrophosphatase | other | 1 | 15730 | 16494 |
| AON97514.1 | KX557288_p94 | hypothetical protein | singleton | unknown function | unknown function | 1 | 68153 | 68359 |
| AON97498.1 | KX557288_p77 | AAA-ATPase | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 56066 | 56830 |
| AON97511.1 | KX557288_p91 | hypothetical protein | singleton | unknown function | unknown function | 1 | 66644 | 67192 |
| AON97472.1 | KX557288_p50 | hydrolase | phrog_15641 | tail fiber protein | tail | 1 | 29604 | 30992 |
| AON97490.1 | KX557288_p69 | resolvase | phrog_1981 | unknown function | unknown function | -1 | 49147 | 49815 |
| AON97436.1 | KX557288_p13 | hypothetical protein | singleton | unknown function | unknown function | -1 | 4534 | 5253 |
| AON97516.1 | KX557288_p20 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9788 | 9988 |
| AON97445.1 | KX557288_p23 | hypothetical protein | phrog_14498 | unknown function | unknown function | 1 | 11558 | 12118 |
| AON97512.1 | KX557288_p92 | hypothetical protein | singleton | unknown function | unknown function | 1 | 67194 | 67565 |
| AON97507.1 | KX557288_p86 | hypothetical protein | phrog_4239 | unknown function | unknown function | 1 | 63930 | 64469 |
| AON97438.1 | KX557288_p15 | hypothetical protein | phrog_5931 | unknown function | unknown function | 1 | 6891 | 7907 |
| AON97475.1 | KX557288_p52 | tail assembly chaperone | phrog_2624 | tail assembly chaperone | tail | 1 | 31497 | 32314 |
| AON97500.1 | KX557288_p79 | phosphoadenosine phosphosulfate reductase | phrog_424 | phosphoadenosine phosphosulfate reductase | moron, auxiliary metabolic gene and host takeover | -1 | 57056 | 57985 |
| AON97480.1 | KX557288_p58 | hypothetical protein | phrog_8672 | unknown function | unknown function | 1 | 40904 | 41350 |
| AON97499.1 | KX557288_p78 | hypothetical protein | singleton | unknown function | unknown function | -1 | 56832 | 57059 |
| AON97474.1 | KX557288_p53 | tail assembly chaperone | phrog_8963 | tail assembly chaperone | tail | 1 | 31497 | 31826 |