Genomic map of Mycobacterium phage PacerPaul (KX574454)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX574454
Definition
Mycobacterium phage PacerPaul, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
52732
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
93
%GC
63.57
Number of singletons
4
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AOQ27816.1 KX574454_p79 hypothetical protein phrog_1809 unknown function unknown function -1 47357 47761
AOQ27757.1 KX574454_p14 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 11310 11822
AOQ27802.1 KX574454_p63 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 41452 42273
AOQ27766.1 KX574454_p22 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 15831 16630
AOQ27820.1 KX574454_p84 hypothetical protein phrog_1155 unknown function unknown function -1 49330 49518
AOQ27748.1 KX574454_p5 tail protein phrog_1197 tail protein tail 1 2519 3607
AOQ27754.1 KX574454_p11 terminase phrog_9 terminase large subunit head and packaging 1 7247 8935
AOQ27779.1 KX574454_p37 hypothetical protein phrog_411 unknown function unknown function 1 28973 29269
AOQ27777.1 KX574454_p34 hypothetical protein phrog_1560 unknown function unknown function 1 28072 28263
AOQ27817.1 KX574454_p80 repressor phrog_357 transcriptional repressor transcription regulation -1 47794 48480
AOQ27761.1 KX574454_p18 head-tail connector phrog_320 head closure Hc1 connector 1 13597 13959
AOQ27824.1 KX574454_p88 hypothetical protein phrog_4631 unknown function unknown function -1 49977 50294
AOQ27829.1 KX574454_p93 hypothetical protein phrog_828 unknown function unknown function -1 52158 52361
AOQ27803.1 KX574454_p64 hypothetical protein phrog_2507 unknown function unknown function -1 42273 42449
AOQ27818.1 KX574454_p81 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 48568 48867
AOQ27772.1 KX574454_p29 hypothetical protein phrog_981 minor tail protein tail 1 23656 24003
AOQ27809.1 KX574454_p70 DNA binding domain protein phrog_4285 transposase integration and excision -1 44502 45212
AOQ27813.1 KX574454_p76 hypothetical protein phrog_20207 unknown function unknown function -1 46533 46682
AOQ27828.1 KX574454_p92 hypothetical protein phrog_5419 unknown function unknown function -1 51771 52112
AOQ27812.1 KX574454_p75 hypothetical protein phrog_21752 unknown function unknown function -1 46285 46536
AOQ27756.1 KX574454_p13 capsid maturation protease phrog_193 head maturation protease head and packaging 1 10371 11252
AOQ27763.1 KX574454_p20 head-tail connector phrog_123 tail terminator connector 1 14358 14804
AOQ27780.1 KX574454_p38 integrase phrog_95 integrase integration and excision 1 29421 30920
AOQ27793.1 KX574454_p53 hypothetical protein phrog_474 phosphofructokinase other -1 38596 38994
AOQ27774.1 KX574454_p31 minor tail subunit phrog_346 minor tail protein tail 1 24325 26178
AOQ27769.1 KX574454_p26 hypothetical protein phrog_1543 minor tail protein tail 1 21191 21373
AOQ27759.1 KX574454_p16 head-tail connector phrog_1857 head-tail connector protein connector 1 12921 13148
AOQ27796.1 KX574454_p57 hypothetical protein phrog_13342 unknown function unknown function -1 40016 40153
AOQ27770.1 KX574454_p27 minor tail subunit phrog_110 minor tail protein tail 1 21373 23175
AOQ27790.1 KX574454_p50 hypothetical protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 36560 36700
AOQ27831.1 KX574454_p36 hypothetical protein singleton unknown function unknown function 1 28529 28852
AOQ27795.1 KX574454_p56 hypothetical protein phrog_1783 unknown function unknown function -1 39852 40016
AOQ27773.1 KX574454_p30 hypothetical protein phrog_1397 unknown function unknown function 1 24000 24299
AOQ27747.1 KX574454_p4 hypothetical protein phrog_20136 unknown function unknown function 1 1896 2147
AOQ27814.1 KX574454_p77 hypothetical protein phrog_1584 unknown function unknown function -1 46744 47049
AOQ27807.1 KX574454_p68 DNA methylase phrog_111 DNA methyltransferase other -1 43089 43616
AOQ27771.1 KX574454_p28 minor tail subunit phrog_352 minor tail protein tail 1 23213 23659
AOQ27822.1 KX574454_p86 hypothetical protein phrog_2093 unknown function unknown function -1 49682 49834
AOQ27781.1 KX574454_p39 hypothetical protein phrog_1966 unknown function unknown function -1 31041 31313
AOQ27762.1 KX574454_p19 head-tail connector phrog_321 tail completion or Neck1 protein connector 1 13959 14354
AOQ27821.1 KX574454_p85 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 49518 49685
AOQ27791.1 KX574454_p51 phosphoesterase phrog_221 metallo-phosphoesterase other -1 36705 38423
AOQ27776.1 KX574454_p33 hypothetical protein phrog_644 unknown function unknown function 1 27736 28062
AOQ27787.1 KX574454_p47 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 35115 35606
AOQ27746.1 KX574454_p3 hypothetical protein phrog_226 minor tail protein tail 1 1166 1606
AOQ27765.1 KX574454_p23 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 15831 16208
AOQ27801.1 KX574454_p62 hypothetical protein phrog_1941 unknown function unknown function -1 41123 41455
AOQ27785.1 KX574454_p45 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 32991 34817
AOQ27806.1 KX574454_p67 DNA binding domain protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 42862 43044
AOQ27823.1 KX574454_p87 hypothetical protein phrog_932 unknown function unknown function -1 49831 49980
AOQ27800.1 KX574454_p61 NrdH phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 40827 41105
AOQ27808.1 KX574454_p69 RecB-like nuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 43693 44505
AOQ27752.1 KX574454_p9 lysin A phrog_317 endolysin lysis 1 4857 6269
AOQ27810.1 KX574454_p73 hypothetical protein phrog_4604 unknown function unknown function -1 45554 46015
AOQ27805.1 KX574454_p66 hypothetical protein phrog_520 unknown function unknown function -1 42565 42858
AOQ27786.1 KX574454_p46 hypothetical protein phrog_1781 unknown function unknown function -1 34854 35084
AOQ27749.1 KX574454_p6 hypothetical protein phrog_553 minor tail protein tail 1 3617 4318
AOQ27792.1 KX574454_p52 hypothetical protein phrog_1503 unknown function unknown function -1 38420 38599
AOQ27778.1 KX574454_p35 hypothetical protein phrog_20812 unknown function unknown function 1 28260 28559
AOQ27789.1 KX574454_p49 RNA polymerase sigma factor phrog_354 sigma-K factor transcription regulation -1 35782 36567
AOQ27753.1 KX574454_p10 lysin B phrog_102 endolysin lysis 1 6259 7227
AOQ27755.1 KX574454_p12 portal protein phrog_104 portal protein head and packaging 1 8932 10374
AOQ27784.1 KX574454_p44 hypothetical protein phrog_383 unknown function unknown function -1 32608 32994
AOQ27836.1 KX574454_p40 hypothetical protein phrog_28124 unknown function unknown function -1 31310 32056
AOQ27782.1 KX574454_p42 hypothetical protein phrog_1860 unknown function unknown function -1 32223 32318
AOQ27834.1 KX574454_p71 hypothetical protein singleton unknown function unknown function -1 45205 45372
AOQ27830.1 KX574454_p2 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 835 1131
AOQ27832.1 KX574454_p41 hypothetical protein phrog_15070 unknown function unknown function -1 32056 32154
AOQ27783.1 KX574454_p43 hypothetical protein phrog_9480 unknown function unknown function -1 32315 32611
AOQ27758.1 KX574454_p15 major capsid protein phrog_10 major head protein head and packaging 1 11832 12842
AOQ27797.1 KX574454_p58 hypothetical protein phrog_397 unknown function unknown function -1 40150 40284
AOQ27794.1 KX574454_p54 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38991 39512
AOQ27804.1 KX574454_p65 hypothetical protein phrog_1705 unknown function unknown function -1 42446 42568
AOQ27751.1 KX574454_p8 hypothetical protein phrog_747 unknown function unknown function 1 4600 4857
AOQ27750.1 KX574454_p7 hypothetical protein phrog_1718 tail protein tail 1 4332 4592
AOQ27798.1 KX574454_p59 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 40281 40757
AOQ27825.1 KX574454_p89 DNA methylase phrog_363 DNA methyltransferase other -1 50597 51271
AOQ27768.1 KX574454_p25 minor tail subunit phrog_106 minor tail protein tail 1 19137 21194
AOQ27819.1 KX574454_p83 hypothetical protein phrog_1387 unknown function unknown function -1 49130 49333
AOQ27837.1 KX574454_p82 hypothetical protein phrog_1720 unknown function unknown function -1 48864 49133
AOQ27799.1 KX574454_p60 hypothetical protein phrog_1019 unknown function unknown function -1 40744 40830
AOQ27826.1 KX574454_p90 hypothetical protein singleton unknown function unknown function -1 51338 51568
AOQ27833.1 KX574454_p55 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 39358 39873
AOQ27775.1 KX574454_p32 D-ala-D-ala carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 26171 27649
AOQ27815.1 KX574454_p78 hypothetical protein phrog_3851 unknown function unknown function -1 47070 47360
AOQ27835.1 KX574454_p72 hypothetical protein singleton unknown function unknown function -1 45395 45514
AOQ27745.1 KX574454_p1 hypothetical protein phrog_13643 helicase DNA, RNA and nucleotide metabolism 1 536 838
AOQ27811.1 KX574454_p74 hypothetical protein phrog_21484 unknown function unknown function -1 46034 46288
AOQ27764.1 KX574454_p21 major tail subunit phrog_117 major tail protein tail 1 14813 15661
AOQ27760.1 KX574454_p17 head-tail connector phrog_137 head-tail adaptor Ad1 connector 1 13148 13597
AOQ27767.1 KX574454_p24 tape measure phrog_305 tail length tape measure protein tail 1 16642 19113
AOQ27827.1 KX574454_p91 hypothetical protein phrog_2212 unknown function unknown function -1 51596 51694
AOQ27788.1 KX574454_p48 hypothetical protein phrog_499 unknown function unknown function -1 35603 35785