Genomic map of Mycobacterium phage Pomar16 (KX574455)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX574455
Definition
Mycobacterium phage Pomar16, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
52833
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
93
%GC
63.42
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AOQ27848.1 KX574455_p11 portal protein phrog_104 portal protein head and packaging 1 9200 10657
AOQ27877.1 KX574455_p40 hypothetical protein phrog_896 unknown function unknown function -1 29014 29220
AOQ27927.1 KX574455_p90 hypothetical protein phrog_519 unknown function unknown function -1 50297 50461
AOQ27863.1 KX574455_p26 minor tail protein phrog_110 minor tail protein tail 1 20090 21880
AOQ27869.1 KX574455_p32 integrase phrog_1 integrase integration and excision -1 25391 26461
AOQ27865.1 KX574455_p28 minor tail protein phrog_404 minor tail protein tail 1 22337 22603
AOQ27878.1 KX574455_p41 hypothetical protein phrog_1545 unknown function unknown function -1 29220 29360
AOQ27858.1 KX574455_p21 major tail subunit phrog_117 major tail protein tail 1 15026 15622
AOQ27909.1 KX574455_p72 hypothetical protein phrog_1562 unknown function unknown function -1 44898 45317
AOQ27886.1 KX574455_p49 hypothetical protein phrog_2046 unknown function unknown function -1 35602 35799
AOQ27884.1 KX574455_p47 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 32931 33509
AOQ27880.1 KX574455_p43 hypothetical protein phrog_2094 unknown function unknown function -1 31202 31537
AOQ27923.1 KX574455_p86 hypothetical protein phrog_15034 unknown function unknown function -1 49599 49730
AOQ27908.1 KX574455_p71 RecB-like nuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 44092 44901
AOQ27903.1 KX574455_p67 phosphoesterase phrog_547 phosphoesterase other -1 42795 43394
AOQ27862.1 KX574455_p25 minor tail protein phrog_106 minor tail protein tail 1 19083 20093
AOQ27873.1 KX574455_p36 hypothetical protein phrog_542 unknown function unknown function -1 28024 28176
AOQ27841.1 KX574455_p4 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2345 2641
AOQ27861.1 KX574455_p24 tape measure protein phrog_305 tail length tape measure protein tail 1 16549 19062
AOQ27894.1 KX574455_p58 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39155 39652
AOQ27851.1 KX574455_p14 major capsid protein phrog_10 major head protein head and packaging 1 12128 13084
AOQ27904.1 KX574455_p68 hypothetical protein phrog_2731 unknown function unknown function -1 43391 43531
AOQ27843.1 KX574455_p6 minor tail protein phrog_1260 minor tail protein tail 1 3231 4199
AOQ27929.1 KX574455_p92 hypothetical protein phrog_1445 unknown function unknown function -1 51219 51296
AOQ27921.1 KX574455_p84 hypothetical protein phrog_3256 unknown function unknown function -1 48833 49195
AOQ27883.1 KX574455_p46 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 32156 32863
AOQ27890.1 KX574455_p53 phosphoesterase phrog_221 metallo-phosphoesterase other -1 36825 37592
AOQ27913.1 KX574455_p76 hypothetical protein phrog_1875 unknown function unknown function -1 46628 46861
AOQ27867.1 KX574455_p30 hypothetical protein phrog_356 minor tail protein tail 1 24453 25124
AOQ27920.1 KX574455_p83 hypothetical protein phrog_2223 unknown function unknown function -1 48533 48799
AOQ27881.1 KX574455_p44 HTH DNA binding protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 31537 31947
AOQ27896.1 KX574455_p60 hydrolase phrog_789 esterase/lipase other -1 39743 40579
AOQ27855.1 KX574455_p18 head-tail connector phrog_320 head closure Hc1 connector 1 13878 14246
AOQ27870.1 KX574455_p33 hypothetical protein phrog_733 excisionase integration and excision 1 26906 27343
AOQ27838.1 KX574455_p1 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 392 1204
AOQ27895.1 KX574455_p59 hypothetical protein phrog_2187 unknown function unknown function -1 39603 39746
AOQ27850.1 KX574455_p13 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 11530 12087
AOQ27857.1 KX574455_p20 head-to-tail connector phrog_123 tail terminator connector 1 14591 15010
AOQ27868.1 KX574455_p31 hypothetical protein phrog_2269 unknown function unknown function 1 25133 25336
AOQ27893.1 KX574455_p56 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38309 38941
AOQ27860.1 KX574455_p22 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 15736 16559
AOQ27914.1 KX574455_p77 hypothetical protein phrog_1477 unknown function unknown function -1 46858 46998
AOQ27849.1 KX574455_p12 capsid maturation protease phrog_193 head maturation protease head and packaging 1 10687 11514
AOQ27872.1 KX574455_p35 cytidine deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 27638 28024
AOQ27887.1 KX574455_p50 hypothetical protein phrog_499 unknown function unknown function -1 35796 35981
AOQ27879.1 KX574455_p42 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 29371 31194
AOQ27907.1 KX574455_p70 hypothetical protein phrog_642 unknown function unknown function -1 43802 44044
AOQ27916.1 KX574455_p79 hypothetical protein phrog_421 unknown function unknown function -1 47270 48043
AOQ27839.1 KX574455_p2 hypothetical protein phrog_8314 unknown function unknown function 1 1318 2097
AOQ27925.1 KX574455_p88 hypothetical protein phrog_1946 unknown function unknown function -1 49819 50013
AOQ27876.1 KX574455_p39 hypothetical protein phrog_10511 unknown function unknown function -1 28814 29014
AOQ27856.1 KX574455_p19 head-to-tail connector phrog_321 tail completion or Neck1 protein connector 1 14246 14581
AOQ27842.1 KX574455_p5 hypothetical protein phrog_226 minor tail protein tail 1 2677 3144
AOQ27853.1 KX574455_p16 head-tail connector phrog_137 head-tail adaptor Ad1 connector 1 13313 13687
AOQ27901.1 KX574455_p65 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 41922 42668
AOQ27891.1 KX574455_p54 hypothetical protein phrog_474 phosphofructokinase other -1 37585 38040
AOQ27919.1 KX574455_p82 hypothetical protein phrog_21270 unknown function unknown function -1 48408 48536
AOQ27918.1 KX574455_p81 hypothetical protein phrog_828 unknown function unknown function -1 48194 48397
AOQ27845.1 KX574455_p8 holin phrog_526 holin lysis 1 6216 6641
AOQ27846.1 KX574455_p9 lysin B phrog_102 endolysin lysis 1 6638 7402
AOQ27924.1 KX574455_p87 hypothetical protein phrog_2001 unknown function unknown function -1 49727 49840
AOQ27910.2 KX574455_p73 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 45372 45917
AOQ27928.1 KX574455_p91 hypothetical protein phrog_1392 unknown function unknown function -1 50469 51191
AOQ27892.1 KX574455_p55 glutaredoxin-like protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 38037 38309
AOQ27898.1 KX574455_p62 hypothetical protein phrog_3369 unknown function unknown function -1 40953 41108
AOQ27885.1 KX574455_p48 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 33521 35602
AOQ27859.1 KX574455_p23 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 15736 16140
AOQ27844.1 KX574455_p7 lysin A phrog_317 endolysin lysis 1 4738 6219
AOQ27840.1 KX574455_p3 hypothetical protein phrog_8551 unknown function unknown function 1 2097 2348
AOQ27875.1 KX574455_p38 hypothetical protein phrog_2099 unknown function unknown function -1 28546 28830
AOQ27926.1 KX574455_p89 hypothetical protein phrog_3207 unknown function unknown function -1 50028 50294
AOQ27911.1 KX574455_p74 hypothetical protein phrog_4294 unknown function unknown function -1 46204 46362
AOQ27871.1 KX574455_p34 Xis phrog_66 excisionase and transcriptional regulator integration and excision -1 27467 27637
AOQ27930.1 KX574455_p93 hypothetical protein phrog_1676 unknown function unknown function -1 51327 51638
AOQ27912.1 KX574455_p75 hypothetical protein phrog_1178 unknown function unknown function -1 46359 46631
AOQ27897.1 KX574455_p61 hypothetical protein phrog_289 GTP-binding domain other -1 40576 40953
AOQ27888.1 KX574455_p51 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 35965 36672
AOQ27852.1 KX574455_p15 hypothetical protein phrog_748 head-tail connector protein connector 1 13154 13309
AOQ27847.1 KX574455_p10 terminase phrog_9 terminase large subunit head and packaging 1 7416 9203
AOQ27874.1 KX574455_p37 hypothetical protein phrog_383 unknown function unknown function -1 28173 28559
AOQ27889.1 KX574455_p52 hypothetical protein phrog_2436 unknown function unknown function -1 36669 36821
AOQ27905.1 KX574455_p69 hypothetical protein phrog_520 unknown function unknown function -1 43528 43761
AOQ27866.1 KX574455_p29 minor tail protein phrog_737 minor tail protein tail 1 22600 24453
AOQ27915.1 KX574455_p78 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 46992 47270
AOQ27899.1 KX574455_p63 hypothetical protein phrog_397 unknown function unknown function -1 41105 41341
AOS48098.1 KX574455_p57 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38769 39158
AOQ27902.1 KX574455_p66 hypothetical protein phrog_17366 unknown function unknown function -1 42652 42798
AOQ27917.1 KX574455_p80 hypothetical protein phrog_855 unknown function unknown function -1 48046 48174
AOQ27854.1 KX574455_p17 head-tail connector phrog_830 head-tail connector protein connector 1 13684 13878
AOQ27900.1 KX574455_p64 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision -1 41504 41890
AOQ27922.1 KX574455_p85 hypothetical protein phrog_586 unknown function unknown function -1 49222 49602
AOQ27864.1 KX574455_p27 minor tail protein phrog_352 minor tail protein tail 1 21897 22340
AOQ27882.1 KX574455_p45 hypothetical protein phrog_690 unknown function unknown function -1 31947 32153