| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX576639 |
Definition |
Mycobacterium phage DudeLittle, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus. |
DB of origin |
NUCCORE |
Length |
52917 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
94 |
%GC |
63.47 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AOQ28206.1 | KX576639_p88 | hypothetical protein | phrog_1946 | unknown function | unknown function | -1 | 49416 | 49616 |
| AOQ28161.1 | KX576639_p43 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 29557 | 31344 |
| AOQ28205.1 | KX576639_p87 | hypothetical protein | phrog_519 | unknown function | unknown function | -1 | 49252 | 49419 |
| AOQ28211.1 | KX576639_p93 | hypothetical protein | phrog_1445 | unknown function | unknown function | -1 | 51299 | 51376 |
| AOQ28148.1 | KX576639_p30 | minor tail protein | phrog_404 | minor tail protein | tail | 1 | 22559 | 22846 |
| AOQ28138.1 | KX576639_p20 | head-to-tail connector protein | phrog_320 | head closure Hc1 | connector | 1 | 14035 | 14403 |
| AOQ28179.1 | KX576639_p61 | endonuclease VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 39420 | 39893 |
| AOQ28208.1 | KX576639_p90 | hypothetical protein | phrog_3207 | unknown function | unknown function | -1 | 49912 | 50199 |
| AOQ28140.1 | KX576639_p22 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 14735 | 15154 |
| AOQ28142.1 | KX576639_p24 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 15868 | 16700 |
| AOQ28202.1 | KX576639_p84 | hypothetical protein | phrog_3718 | unknown function | unknown function | -1 | 48260 | 48523 |
| AOQ28173.1 | KX576639_p55 | metallophosphoesterase | phrog_221 | metallo-phosphoesterase | other | -1 | 37056 | 37826 |
| AOQ28170.1 | KX576639_p52 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 36056 | 36235 |
| AOQ28143.1 | KX576639_p25 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 15868 | 16275 |
| AOQ28153.1 | KX576639_p35 | hypothetical protein | phrog_549 | unknown function | unknown function | 1 | 27298 | 27681 |
| AOQ28160.1 | KX576639_p42 | hypothetical protein | phrog_896 | unknown function | unknown function | -1 | 29307 | 29525 |
| AOQ28174.1 | KX576639_p56 | hypothetical protein | phrog_474 | phosphofructokinase | other | -1 | 37823 | 38146 |
| AOQ28203.1 | KX576639_p85 | hypothetical protein | phrog_2223 | unknown function | unknown function | -1 | 48588 | 48872 |
| AOQ28129.1 | KX576639_p11 | lysin B | phrog_102 | endolysin | lysis | 1 | 6524 | 7516 |
| AOQ28187.1 | KX576639_p69 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 42713 | 42991 |
| AOQ28201.1 | KX576639_p83 | hypothetical protein | phrog_855 | unknown function | unknown function | -1 | 48120 | 48254 |
| AOQ28209.1 | KX576639_p91 | hypothetical protein | phrog_1617 | unknown function | unknown function | -1 | 50220 | 51101 |
| AOQ28178.1 | KX576639_p60 | hypothetical protein | phrog_1370 | unknown function | unknown function | -1 | 39257 | 39394 |
| AOQ28137.1 | KX576639_p19 | head-to-tail connector protein | phrog_830 | head-tail connector protein | connector | 1 | 13844 | 14038 |
| AOQ28146.1 | KX576639_p28 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 20267 | 22039 |
| AOQ28128.1 | KX576639_p10 | holin | phrog_526 | holin | lysis | 1 | 6087 | 6527 |
| AOQ28164.1 | KX576639_p46 | helix-turn-helix DNA binding domain protein | phrog_517 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 31828 | 32250 |
| AOQ28134.1 | KX576639_p16 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 12259 | 13215 |
| AOQ28189.1 | KX576639_p71 | hypothetical protein | phrog_642 | unknown function | unknown function | -1 | 43172 | 43396 |
| AOQ28130.1 | KX576639_p12 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 7538 | 9325 |
| AOQ28154.1 | KX576639_p36 | excise | phrog_66 | excisionase and transcriptional regulator | integration and excision | -1 | 27789 | 27959 |
| AOQ28162.1 | KX576639_p44 | hypothetical protein | phrog_4326 | unknown function | unknown function | -1 | 31353 | 31643 |
| AOQ28158.1 | KX576639_p40 | hypothetical protein | phrog_3771 | unknown function | unknown function | -1 | 28796 | 29080 |
| AOQ28157.1 | KX576639_p39 | hypothetical protein | phrog_2099 | unknown function | unknown function | -1 | 28533 | 28799 |
| AOQ28149.1 | KX576639_p31 | minor tail protein | phrog_737 | minor tail protein | tail | 1 | 22847 | 25045 |
| AOQ28200.1 | KX576639_p82 | hypothetical protein | phrog_421 | unknown function | unknown function | -1 | 47362 | 48120 |
| AOQ28168.1 | KX576639_p50 | ribonucleotide reductase | phrog_367 | ribonucleotide reductase | DNA, RNA and nucleotide metabolism | -1 | 33796 | 35856 |
| AOQ28197.1 | KX576639_p79 | hypothetical protein | phrog_3351 | unknown function | unknown function | -1 | 46699 | 46932 |
| AOQ28150.1 | KX576639_p32 | hypothetical protein | phrog_2570 | unknown function | unknown function | 1 | 25122 | 25316 |
| AOQ28176.1 | KX576639_p58 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38415 | 39047 |
| AOQ28152.1 | KX576639_p34 | hypothetical protein | phrog_733 | excisionase | integration and excision | 1 | 26868 | 27251 |
| AOQ28163.1 | KX576639_p45 | hypothetical protein | phrog_3812 | unknown function | unknown function | -1 | 31643 | 31828 |
| AOQ28165.1 | KX576639_p47 | hypothetical protein | phrog_690 | unknown function | unknown function | -1 | 32247 | 32456 |
| AOQ28193.1 | KX576639_p75 | hypothetical protein | phrog_1173 | unknown function | unknown function | -1 | 45564 | 45728 |
| AOQ28192.1 | KX576639_p74 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 44743 | 45321 |
| AOQ28166.1 | KX576639_p48 | thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 32458 | 33183 |
| AOQ28180.1 | KX576639_p62 | hypothetical protein | phrog_2187 | unknown function | unknown function | -1 | 39859 | 39978 |
| AOQ28136.1 | KX576639_p18 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 13470 | 13847 |
| AOQ28131.1 | KX576639_p13 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 9322 | 10785 |
| AOQ28190.1 | KX576639_p72 | exonuclease/helicase | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 43444 | 44262 |
| AOQ28122.1 | KX576639_p4 | hypothetical protein | phrog_3585 | immunity protein | other | 1 | 2357 | 2674 |
| AOQ28177.1 | KX576639_p59 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38875 | 39279 |
| AOQ28126.1 | KX576639_p8 | hypothetical protein | phrog_1087 | unknown function | unknown function | 1 | 4640 | 4798 |
| AOQ28151.1 | KX576639_p33 | integrase | phrog_1 | integrase | integration and excision | -1 | 25302 | 26423 |
| AOQ28175.1 | KX576639_p57 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 38143 | 38415 |
| AOQ28159.1 | KX576639_p41 | hypothetical protein | phrog_3283 | unknown function | unknown function | -1 | 29080 | 29307 |
| AOQ28156.1 | KX576639_p38 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 28153 | 28536 |
| AOQ28196.1 | KX576639_p78 | hypothetical protein | phrog_1875 | unknown function | unknown function | -1 | 46430 | 46702 |
| AOQ28121.1 | KX576639_p3 | hypothetical protein | phrog_5234 | unknown function | unknown function | 1 | 1545 | 2357 |
| AOQ28120.1 | KX576639_p2 | hypothetical protein | phrog_940 | nuclease | DNA, RNA and nucleotide metabolism | 1 | 664 | 1497 |
| AOQ28135.1 | KX576639_p17 | head-to-tail connector protein | phrog_748 | head-tail connector protein | connector | 1 | 13285 | 13467 |
| AOQ28198.1 | KX576639_p80 | hypothetical protein | phrog_1477 | unknown function | unknown function | -1 | 46932 | 47060 |
| AOQ28186.1 | KX576639_p68 | hypothetical protein | phrog_2731 | unknown function | unknown function | -1 | 42579 | 42716 |
| AOQ28155.1 | KX576639_p37 | hypothetical protein | phrog_9463 | unknown function | unknown function | -1 | 27959 | 28156 |
| AOQ28199.1 | KX576639_p81 | hypothetical protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 47060 | 47365 |
| AOQ28125.1 | KX576639_p7 | hypothetical protein | phrog_1260 | minor tail protein | tail | 1 | 3561 | 4526 |
| AOQ28183.1 | KX576639_p65 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 41068 | 41298 |
| AOQ28132.1 | KX576639_p14 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 10782 | 11666 |
| AOQ28144.1 | KX576639_p26 | tape measure protein | phrog_305 | tail length tape measure protein | tail | 1 | 16690 | 19233 |
| AOQ28119.1 | KX576639_p1 | hypothetical protein | phrog_7736 | unknown function | unknown function | 1 | 332 | 448 |
| AOQ28207.1 | KX576639_p89 | hypothetical protein | phrog_1556 | unknown function | unknown function | -1 | 49619 | 49915 |
| AOQ28124.1 | KX576639_p6 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 3006 | 3476 |
| AOQ28171.1 | KX576639_p53 | helix-turn-helix DNA binding domain protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 36235 | 36906 |
| AOQ28141.1 | KX576639_p23 | major tail protein | phrog_117 | major tail protein | tail | 1 | 15173 | 15757 |
| AOQ28195.1 | KX576639_p77 | hypothetical protein | phrog_1178 | unknown function | unknown function | -1 | 46131 | 46433 |
| AOQ28147.1 | KX576639_p29 | minor tail protein | phrog_352 | minor tail protein | tail | 1 | 22116 | 22562 |
| AOQ28204.1 | KX576639_p86 | hypothetical protein | phrog_586 | unknown function | unknown function | -1 | 48902 | 49255 |
| AOQ28184.1 | KX576639_p66 | hypothetical protein | phrog_5101 | unknown function | unknown function | -1 | 41433 | 41732 |
| AOQ28127.1 | KX576639_p9 | lysin A | phrog_317 | endolysin | lysis | 1 | 4798 | 6090 |
| AOQ28139.1 | KX576639_p21 | head-to-tail connector protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 14403 | 14738 |
| AOQ28182.1 | KX576639_p64 | helix-turn-helix DNA binding domain protein | phrog_1123 | unknown function | unknown function | -1 | 40811 | 41068 |
| AOQ28172.1 | KX576639_p54 | hypothetical protein | phrog_2436 | unknown function | unknown function | -1 | 36903 | 37052 |
| AOQ28145.1 | KX576639_p27 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 19254 | 20270 |
| AOQ28212.1 | KX576639_p94 | hypothetical protein | phrog_1676 | unknown function | unknown function | -1 | 51410 | 51703 |
| AOQ28181.1 | KX576639_p63 | esterase | phrog_789 | esterase/lipase | other | -1 | 39978 | 40814 |
| AOQ28123.1 | KX576639_p5 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2671 | 2967 |
| AOQ28133.1 | KX576639_p15 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 11717 | 12229 |
| AOQ28191.1 | KX576639_p73 | hypothetical protein | phrog_1562 | unknown function | unknown function | -1 | 44259 | 44678 |
| AOQ28185.1 | KX576639_p67 | dsDNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 41763 | 42569 |
| AOQ28210.1 | KX576639_p92 | hypothetical protein | phrog_2499 | unknown function | unknown function | -1 | 51098 | 51271 |
| AOQ28188.1 | KX576639_p70 | hypothetical protein | phrog_666 | unknown function | unknown function | -1 | 42981 | 43175 |
| AOQ28169.1 | KX576639_p51 | hypothetical protein | phrog_2046 | unknown function | unknown function | -1 | 35856 | 36059 |
| AOQ28167.1 | KX576639_p49 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 33263 | 33784 |
| AOQ28194.1 | KX576639_p76 | hypothetical protein | phrog_4569 | unknown function | unknown function | -1 | 45875 | 46129 |