| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX580962 |
Definition |
Mycobacterium phage Wilder, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bronvirus; unclassified Bronvirus. |
DB of origin |
NUCCORE |
Length |
75806 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
130 |
%GC |
58.89 |
Number of singletons |
0 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AOT22993.1 | KX580962_p2 | terminase small subunit | phrog_1496 | terminase small subunit | head and packaging | 1 | 477 | 866 |
| AOT23105.1 | KX580962_p117 | hypothetical protein | phrog_3777 | unknown function | unknown function | -1 | 68731 | 69105 |
| AOT23095.1 | KX580962_p107 | hypothetical protein | phrog_6170 | unknown function | unknown function | 1 | 65345 | 65698 |
| AOT23100.1 | KX580962_p112 | hypothetical protein | phrog_18991 | unknown function | unknown function | -1 | 67121 | 67309 |
| AOT23108.1 | KX580962_p120 | hypothetical protein | phrog_6004 | unknown function | unknown function | -1 | 69619 | 69882 |
| AOT23113.1 | KX580962_p126 | AAA-ATPase | phrog_249 | porphyrin biosynthesis | moron, auxiliary metabolic gene and host takeover | -1 | 72610 | 73851 |
| AOT23112.1 | KX580962_p125 | hypothetical protein | phrog_1909 | unknown function | unknown function | -1 | 71551 | 72399 |
| AOT23005.1 | KX580962_p15 | tail assembly chaperone | phrog_4464 | tail assembly chaperone | tail | 1 | 9990 | 10289 |
| AOT23044.1 | KX580962_p53 | hypothetical protein | phrog_4870 | unknown function | unknown function | 1 | 39751 | 40170 |
| AOT23055.1 | KX580962_p64 | hypothetical protein | phrog_5917 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 45485 | 45685 |
| AOT23093.1 | KX580962_p105 | hypothetical protein | phrog_5018 | unknown function | unknown function | 1 | 64021 | 64431 |
| AOT23118.1 | KX580962_p68 | hypothetical protein | phrog_542 | unknown function | unknown function | 1 | 46730 | 46912 |
| AOT23098.1 | KX580962_p110 | hypothetical protein | phrog_2869 | unknown function | unknown function | -1 | 66115 | 66306 |
| AOT23119.1 | KX580962_p83 | hypothetical protein | phrog_12221 | unknown function | unknown function | 1 | 54615 | 54713 |
| AOT23083.1 | KX580962_p95 | HNH endonuclease | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 59217 | 59630 |
| AOT23039.1 | KX580962_p48 | hypothetical protein | phrog_9705 | unknown function | unknown function | 1 | 37625 | 37960 |
| AOT23089.1 | KX580962_p101 | hypothetical protein | phrog_3699 | unknown function | unknown function | 1 | 62104 | 62322 |
| AOT23021.1 | KX580962_p30 | hypothetical protein | phrog_5807 | unknown function | unknown function | 1 | 27757 | 28011 |
| AOT23067.1 | KX580962_p77 | hypothetical protein | phrog_14542 | unknown function | unknown function | 1 | 52867 | 52998 |
| AOT23040.1 | KX580962_p49 | hypothetical protein | phrog_6017 | unknown function | unknown function | 1 | 37947 | 38264 |
| AOT23076.1 | KX580962_p88 | RNA ligase | phrog_968 | RNA ligase | DNA, RNA and nucleotide metabolism | 1 | 55989 | 57266 |
| AOT23082.1 | KX580962_p94 | hypothetical protein | phrog_1969 | unknown function | unknown function | 1 | 58831 | 59169 |
| AOT23045.1 | KX580962_p54 | hypothetical protein | phrog_2380 | unknown function | unknown function | 1 | 40171 | 40410 |
| AOT23107.1 | KX580962_p119 | hypothetical protein | phrog_7390 | unknown function | unknown function | -1 | 69338 | 69532 |
| AOT23037.1 | KX580962_p46 | hypothetical protein | phrog_5916 | unknown function | unknown function | 1 | 36252 | 36617 |
| AOT23110.1 | KX580962_p122 | hypothetical protein | phrog_6968 | unknown function | unknown function | -1 | 70107 | 70310 |
| AOT23104.1 | KX580962_p116 | hypothetical protein | phrog_1909 | unknown function | unknown function | -1 | 67781 | 68632 |
| AOT23064.1 | KX580962_p74 | phosphoribosyl pyrophosphate transferase | phrog_619 | ribose-phosphate pyrophosphokinase | other | 1 | 49510 | 50373 |
| AOT23086.1 | KX580962_p98 | DNA polymerase III subunit | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 60376 | 61158 |
| AOT23101.1 | KX580962_p113 | hypothetical protein | phrog_15796 | unknown function | unknown function | -1 | 67340 | 67498 |
| AOT23054.1 | KX580962_p63 | ERF family ssDNA binding protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 44730 | 45485 |
| AOT23028.1 | KX580962_p37 | hypothetical protein | phrog_10128 | unknown function | unknown function | -1 | 30757 | 31125 |
| AOT23022.1 | KX580962_p31 | hypothetical protein | phrog_726 | unknown function | unknown function | 1 | 28014 | 28436 |
| AOT23018.1 | KX580962_p27 | lysin A | phrog_1512 | endolysin | lysis | 1 | 25358 | 26308 |
| AOT23020.1 | KX580962_p29 | hypothetical protein | phrog_5963 | holin | lysis | 1 | 27284 | 27757 |
| AOT23015.1 | KX580962_p24 | minor tail protein | phrog_9784 | minor tail protein | tail | 1 | 21942 | 24230 |
| AOT23065.1 | KX580962_p75 | nicotinate ribosyltransferase | phrog_448 | nicotinamide phosphoribosyl transferase | other | 1 | 50370 | 51854 |
| AOT23074.1 | KX580962_p85 | ssDNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 55257 | 55643 |
| AOT23092.1 | KX580962_p104 | hypothetical protein | phrog_10206 | unknown function | unknown function | 1 | 62894 | 63034 |
| AOT23013.1 | KX580962_p22 | minor tail protein | phrog_4137 | unknown function | unknown function | 1 | 21195 | 21470 |
| AOT23085.1 | KX580962_p97 | hypothetical protein | phrog_4472 | nucleotide kinase | other | 1 | 59963 | 60379 |
| AOT23056.1 | KX580962_p65 | hypothetical protein | phrog_7527 | unknown function | unknown function | 1 | 45682 | 45966 |
| AOT23009.1 | KX580962_p18 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 16994 | 18727 |
| AOT23003.1 | KX580962_p12 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 8471 | 8974 |
| AOT23094.1 | KX580962_p106 | hypothetical protein | phrog_940 | nuclease | DNA, RNA and nucleotide metabolism | 1 | 64650 | 65339 |
| AOT23029.1 | KX580962_p38 | integrase | phrog_1 | integrase | integration and excision | 1 | 31661 | 32968 |
| AOT23053.1 | KX580962_p62 | hypothetical protein | phrog_1123 | unknown function | unknown function | 1 | 44415 | 44729 |
| AOT23068.1 | KX580962_p78 | hypothetical protein | phrog_7155 | unknown function | unknown function | 1 | 52982 | 53224 |
| AOT23032.1 | KX580962_p41 | CRO protein | phrog_1702 | transcriptional repressor | transcription regulation | 1 | 34473 | 34703 |
| AOT23038.1 | KX580962_p47 | esterase | phrog_1649 | metallo-phosphoesterase | other | 1 | 36610 | 37644 |
| AOT23016.1 | KX580962_p25 | hypothetical protein | phrog_9833 | unknown function | unknown function | 1 | 24262 | 24411 |
| AOT23115.1 | KX580962_p128 | hypothetical protein | phrog_12614 | unknown function | unknown function | -1 | 74219 | 74344 |
| AOT23049.1 | KX580962_p58 | hypothetical protein | phrog_5872 | unknown function | unknown function | 1 | 42774 | 43091 |
| AOT23121.1 | KX580962_p130 | hypothetical protein | phrog_15448 | unknown function | unknown function | -1 | 75033 | 75158 |
| AOT23078.1 | KX580962_p90 | protease | phrog_94 | head maturation protease | head and packaging | 1 | 57414 | 58097 |
| AOT23006.1 | KX580962_p14 | tail assembly chaperone | phrog_2624 | tail assembly chaperone | tail | 1 | 9990 | 10813 |
| AOT23050.1 | KX580962_p59 | hypothetical protein | phrog_5858 | unknown function | unknown function | 1 | 43088 | 43264 |
| AOT23066.1 | KX580962_p76 | polynucleotide kinase | phrog_505 | polynucleotide kinase | other | 1 | 51941 | 52867 |
| AOT22992.1 | KX580962_p1 | hypothetical protein | phrog_7082 | unknown function | unknown function | 1 | 91 | 468 |
| AOT23047.1 | KX580962_p56 | hypothetical protein | phrog_4670 | unknown function | unknown function | 1 | 42325 | 42456 |
| AOT23060.1 | KX580962_p70 | dsDNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 47586 | 48851 |
| AOT23103.1 | KX580962_p115 | hypothetical protein | phrog_6230 | unknown function | unknown function | -1 | 67582 | 67752 |
| AOT23041.1 | KX580962_p50 | hypothetical protein | phrog_7316 | unknown function | unknown function | 1 | 38272 | 38400 |
| AOT23010.1 | KX580962_p19 | minor tail protein | phrog_4413 | minor tail protein | tail | 1 | 18752 | 19249 |
| AOT23036.1 | KX580962_p45 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 35362 | 35778 |
| AOT23033.1 | KX580962_p42 | excise | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 34700 | 34915 |
| AOT23073.1 | KX580962_p84 | hypothetical protein | phrog_1568 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 54704 | 55270 |
| AOT23057.1 | KX580962_p66 | hypothetical protein | phrog_1389 | unknown function | unknown function | 1 | 45963 | 46322 |
| AOT23007.1 | KX580962_p16 | tape measure protein | phrog_3547 | tail length tape measure protein | tail | 1 | 10855 | 15990 |
| AOT23048.1 | KX580962_p57 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 42449 | 42784 |
| AOT23000.1 | KX580962_p9 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 7231 | 7695 |
| AOT23035.1 | KX580962_p44 | hypothetical protein | phrog_8707 | unknown function | unknown function | 1 | 35255 | 35365 |
| AOT23008.1 | KX580962_p17 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 16079 | 16993 |
| AOT23014.1 | KX580962_p23 | minor tail protein | phrog_240 | head protein | head and packaging | 1 | 21555 | 21941 |
| AOT22997.1 | KX580962_p6 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 4311 | 5369 |
| AOT23001.1 | KX580962_p10 | head-to-tail connector protein | phrog_5309 | head-tail adaptor | connector | 1 | 7692 | 8030 |
| AOT22999.1 | KX580962_p8 | major capsid protein | phrog_283 | major head protein | head and packaging | 1 | 6070 | 7218 |
| AOT22994.1 | KX580962_p3 | hypothetical protein | phrog_6976 | unknown function | unknown function | 1 | 866 | 1069 |
| AOT23091.1 | KX580962_p103 | hypothetical protein | phrog_6800 | unknown function | unknown function | 1 | 62560 | 62736 |
| AOT23058.1 | KX580962_p67 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 46369 | 46770 |
| AOT23011.1 | KX580962_p20 | minor tail protein | phrog_2689 | minor tail protein | tail | 1 | 19233 | 21029 |
| AOT23111.1 | KX580962_p123 | hypothetical protein | phrog_6176 | unknown function | unknown function | 1 | 70371 | 70853 |
| AOT23019.1 | KX580962_p28 | lysin B | phrog_102 | endolysin | lysis | 1 | 26308 | 27279 |
| AOT23071.1 | KX580962_p81 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 53924 | 54220 |
| AOT23099.1 | KX580962_p111 | hypothetical protein | phrog_4776 | unknown function | unknown function | -1 | 66408 | 67124 |
| AOT23046.1 | KX580962_p55 | hypothetical protein | phrog_850 | RNA-binding protein | DNA, RNA and nucleotide metabolism | 1 | 40526 | 41956 |
| AOT23025.1 | KX580962_p34 | hypothetical protein | phrog_9776 | unknown function | unknown function | -1 | 29113 | 29400 |
| AOT23042.1 | KX580962_p51 | hypothetical protein | phrog_9674 | unknown function | unknown function | 1 | 38437 | 38565 |
| AOT23109.1 | KX580962_p121 | hypothetical protein | phrog_8547 | unknown function | unknown function | -1 | 69886 | 70020 |
| AOT23063.1 | KX580962_p73 | hypothetical protein | phrog_6206 | unknown function | unknown function | 1 | 49379 | 49525 |
| AOT23120.1 | KX580962_p87 | hypothetical protein | phrog_14246 | unknown function | unknown function | 1 | 55912 | 55992 |
| AOT22996.1 | KX580962_p5 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2638 | 4293 |
| AOT23102.1 | KX580962_p114 | hypothetical protein | phrog_6739 | unknown function | unknown function | -1 | 67491 | 67589 |
| AOT23062.1 | KX580962_p72 | hypothetical protein | phrog_6624 | unknown function | unknown function | 1 | 49135 | 49389 |
| AOT23004.1 | KX580962_p13 | major tail protein | phrog_476 | major tail protein | tail | 1 | 9002 | 9901 |
| AOT23114.1 | KX580962_p127 | hypothetical protein | phrog_38731 | unknown function | unknown function | -1 | 74043 | 74168 |
| AOT23088.1 | KX580962_p100 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 61682 | 62104 |
| AOT23024.1 | KX580962_p33 | hypothetical protein | phrog_6558 | unknown function | unknown function | -1 | 28763 | 29107 |
| AOT23043.1 | KX580962_p52 | band-7-like membrane protein | phrog_200 | lipoprotein | other | 1 | 38653 | 39612 |
| AOT23075.1 | KX580962_p86 | hypothetical protein | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 55706 | 55924 |
| AOT23052.1 | KX580962_p61 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 43502 | 44434 |
| AOT23117.1 | KX580962_p124 | hypothetical protein | phrog_22726 | unknown function | unknown function | -1 | 70868 | 71104 |
| AOT22998.1 | KX580962_p7 | scaffolding protein | phrog_3760 | head scaffolding protein | head and packaging | 1 | 5422 | 6027 |
| AOT23079.1 | KX580962_p91 | hypothetical protein | phrog_7495 | unknown function | unknown function | 1 | 58097 | 58492 |
| AOT23030.1 | KX580962_p39 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 32965 | 33744 |
| AOT23026.1 | KX580962_p35 | nucleotidyltransferase | phrog_388 | nucleotidyltransferase | DNA, RNA and nucleotide metabolism | -1 | 29385 | 30131 |
| AOT23097.1 | KX580962_p109 | hypothetical protein | phrog_2124 | unknown function | unknown function | -1 | 65894 | 66019 |
| AOT23080.1 | KX580962_p92 | hypothetical protein | phrog_7890 | unknown function | unknown function | 1 | 58492 | 58602 |
| AOT23090.1 | KX580962_p102 | hypothetical protein | phrog_6027 | unknown function | unknown function | 1 | 62315 | 62434 |
| AOT23077.1 | KX580962_p89 | hypothetical protein | phrog_3641 | unknown function | unknown function | 1 | 57250 | 57417 |
| AOT23106.1 | KX580962_p118 | hypothetical protein | phrog_6224 | unknown function | unknown function | -1 | 69139 | 69348 |
| AOT23116.1 | KX580962_p129 | hypothetical protein | phrog_7398 | unknown function | unknown function | -1 | 74430 | 74939 |
| AOT23031.1 | KX580962_p40 | immunity repressor | phrog_1746 | transcriptional repressor | transcription regulation | -1 | 33897 | 34286 |
| AOT23081.1 | KX580962_p93 | hypothetical protein | phrog_2218 | unknown function | unknown function | 1 | 58599 | 58838 |
| AOT23072.1 | KX580962_p82 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 54221 | 54631 |
| AOT23084.1 | KX580962_p96 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 59728 | 59988 |
| AOT23012.1 | KX580962_p21 | minor tail protein | phrog_9672 | minor tail protein | tail | 1 | 21035 | 21205 |
| AOT23051.1 | KX580962_p60 | hypothetical protein | phrog_7425 | unknown function | unknown function | 1 | 43257 | 43460 |
| AOT23002.1 | KX580962_p11 | head-to-tail connector protein | phrog_5775 | head-tail connector protein | connector | 1 | 8030 | 8461 |
| AOT23027.1 | KX580962_p36 | DNA bridging protein | phrog_1223 | nucloid associated Lsr2-like | DNA, RNA and nucleotide metabolism | -1 | 30216 | 30680 |
| AOT23034.1 | KX580962_p43 | hypothetical protein | phrog_762 | unknown function | unknown function | 1 | 34912 | 35274 |
| AOT22995.1 | KX580962_p4 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 1069 | 2637 |
| AOT23023.1 | KX580962_p32 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 28427 | 28693 |
| AOT23061.1 | KX580962_p71 | hypothetical protein | phrog_1821 | transcriptional regulator WhiB-like | transcription regulation | 1 | 48848 | 49102 |
| AOT23087.1 | KX580962_p99 | hypothetical protein | phrog_397 | unknown function | unknown function | 1 | 61159 | 61341 |
| AOT23096.1 | KX580962_p108 | hypothetical protein | phrog_10010 | unknown function | unknown function | -1 | 65742 | 65897 |
| AOT23070.1 | KX580962_p80 | endonuclease | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 53563 | 53976 |
| AOT23059.1 | KX580962_p69 | hypothetical protein | phrog_1882 | unknown function | unknown function | 1 | 46909 | 47589 |
| AOT23069.1 | KX580962_p79 | hypothetical protein | phrog_6064 | unknown function | unknown function | 1 | 53221 | 53406 |
| AOT23017.1 | KX580962_p26 | hypothetical protein | phrog_3856 | minor tail protein | tail | 1 | 24412 | 25353 |