| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX611831 |
Definition |
Mycobacterium phage Pharsalus, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus; unclassified Kostyavirus. |
DB of origin |
NUCCORE |
Length |
75779 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
142 |
%GC |
63.01 |
Number of singletons |
0 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AOT24000.1 | KX611831_p118 | hypothetical protein | phrog_2764 | unknown function | unknown function | 1 | 67900 | 68067 |
| AOT23999.1 | KX611831_p117 | hypothetical protein | phrog_2174 | unknown function | unknown function | 1 | 67442 | 67903 |
| AOT23936.1 | KX611831_p51 | hypothetical protein | phrog_2842 | unknown function | unknown function | 1 | 38922 | 39161 |
| AOT23959.1 | KX611831_p76 | hypothetical protein | phrog_1882 | unknown function | unknown function | 1 | 49047 | 49697 |
| AOT24022.1 | KX611831_p141 | hypothetical protein | phrog_2762 | unknown function | unknown function | 1 | 74987 | 75208 |
| AOT23894.1 | KX611831_p9 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 2303 | 4966 |
| AOT23994.1 | KX611831_p112 | hypothetical protein | phrog_1941 | unknown function | unknown function | 1 | 65547 | 65789 |
| AOT23981.1 | KX611831_p99 | hypothetical protein | phrog_1454 | unknown function | unknown function | 1 | 61008 | 61205 |
| AOT23957.1 | KX611831_p74 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 48507 | 48824 |
| AOT24002.1 | KX611831_p120 | hypothetical protein | phrog_33413 | unknown function | unknown function | 1 | 68253 | 68561 |
| AOT24020.1 | KX611831_p139 | hypothetical protein | phrog_8479 | unknown function | unknown function | -1 | 74324 | 74524 |
| AOT24016.1 | KX611831_p135 | hypothetical protein | phrog_1438 | unknown function | unknown function | -1 | 73502 | 73675 |
| AOT23925.1 | KX611831_p40 | hypothetical protein | phrog_3481 | unknown function | unknown function | -1 | 34791 | 34988 |
| AOT24006.1 | KX611831_p125 | hypothetical protein | phrog_2942 | unknown function | unknown function | -1 | 69985 | 70245 |
| AOT23962.1 | KX611831_p79 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 51281 | 51469 |
| AOT23927.1 | KX611831_p42 | hypothetical protein | phrog_722 | unknown function | unknown function | -1 | 35449 | 35724 |
| AOT23989.1 | KX611831_p107 | hypothetical protein | phrog_2252 | endolysin; inhibits RNA polymerase | lysis | 1 | 63834 | 64313 |
| AOT24013.1 | KX611831_p132 | hypothetical protein | phrog_2287 | unknown function | unknown function | -1 | 72301 | 72537 |
| AOT24010.1 | KX611831_p129 | hypothetical protein | phrog_1587 | unknown function | unknown function | -1 | 71532 | 71861 |
| AOT23966.1 | KX611831_p83 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 52277 | 52639 |
| AOT23939.1 | KX611831_p55 | hypothetical protein | phrog_2852 | unknown function | unknown function | 1 | 40759 | 40896 |
| AOT23982.1 | KX611831_p100 | hypothetical protein | phrog_2785 | unknown function | unknown function | 1 | 61202 | 61558 |
| AOT23920.1 | KX611831_p35 | hypothetical protein | phrog_2424 | unknown function | unknown function | 1 | 32303 | 32641 |
| AOT23935.1 | KX611831_p50 | integrase | phrog_1 | integrase | integration and excision | 1 | 37902 | 38783 |
| AOT23998.1 | KX611831_p116 | hypothetical protein | phrog_2279 | unknown function | unknown function | 1 | 67046 | 67258 |
| AOT23961.1 | KX611831_p78 | dsDNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 50022 | 51284 |
| AOT24024.1 | KX611831_p52 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 39139 | 39912 |
| AOT23965.1 | KX611831_p82 | hypothetical protein | phrog_3836 | unknown function | unknown function | 1 | 51915 | 52280 |
| AOT24014.1 | KX611831_p133 | hypothetical protein | phrog_2883 | unknown function | unknown function | -1 | 72553 | 73101 |
| AOT23934.1 | KX611831_p49 | hypothetical protein | phrog_2847 | unknown function | unknown function | -1 | 37349 | 37651 |
| AOT23967.1 | KX611831_p84 | hypothetical protein | phrog_2894 | unknown function | unknown function | 1 | 52636 | 52830 |
| AOT23902.1 | KX611831_p17 | hypothetical protein | phrog_2805 | minor tail protein | tail | 1 | 10833 | 11213 |
| AOT24017.1 | KX611831_p136 | hypothetical protein | phrog_2772 | unknown function | unknown function | -1 | 73672 | 73908 |
| AOT23893.1 | KX611831_p8 | hypothetical protein | phrog_2202 | unknown function | unknown function | -1 | 1956 | 2267 |
| AOT24023.1 | KX611831_p142 | hypothetical protein | phrog_8627 | unknown function | unknown function | 1 | 75253 | 75666 |
| AOT23956.1 | KX611831_p73 | hypothetical protein | phrog_289 | GTP-binding domain | other | 1 | 48097 | 48510 |
| AOT23933.1 | KX611831_p48 | hypothetical protein | phrog_2759 | unknown function | unknown function | -1 | 36667 | 37062 |
| AOT23915.1 | KX611831_p30 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 29330 | 29758 |
| AOT23930.1 | KX611831_p45 | hypothetical protein | phrog_2893 | unknown function | unknown function | -1 | 36058 | 36294 |
| AOT23905.1 | KX611831_p20 | hypothetical protein | phrog_5711 | head fiber protein | head and packaging | 1 | 12656 | 13129 |
| AOT23995.1 | KX611831_p113 | DNA recombinase | phrog_97 | UvsX-like recombinase | other | 1 | 65797 | 66759 |
| AOT23952.1 | KX611831_p69 | hypothetical protein | phrog_1389 | unknown function | unknown function | 1 | 46946 | 47317 |
| AOT23960.1 | KX611831_p77 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 49694 | 50029 |
| AOT23940.1 | KX611831_p56 | pentapeptide repeat protein | phrog_923 | unknown function | unknown function | 1 | 40893 | 41738 |
| AOT23969.1 | KX611831_p87 | hypothetical protein | phrog_2844 | unknown function | unknown function | 1 | 54374 | 54496 |
| AOT23983.1 | KX611831_p101 | hypothetical protein | phrog_2757 | unknown function | unknown function | 1 | 61559 | 61849 |
| AOT23985.1 | KX611831_p103 | HNH endonuclease | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 62218 | 62508 |
| AOT23938.1 | KX611831_p54 | hypothetical protein | phrog_3071 | unknown function | unknown function | 1 | 40664 | 40762 |
| AOT23903.1 | KX611831_p18 | hypothetical protein | phrog_813 | head-tail adaptor | connector | 1 | 11191 | 11595 |
| AOT23987.1 | KX611831_p105 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 63183 | 63446 |
| AOT23910.1 | KX611831_p25 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 20526 | 22205 |
| AOT23973.1 | KX611831_p91 | hypothetical protein | phrog_2853 | unknown function | unknown function | 1 | 56950 | 57108 |
| AOT23911.1 | KX611831_p26 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 22214 | 23047 |
| AOT23972.1 | KX611831_p90 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 56673 | 56933 |
| AOT23986.1 | KX611831_p104 | hypothetical protein | phrog_2846 | unknown function | unknown function | 1 | 62890 | 63186 |
| AOT23955.1 | KX611831_p72 | hypothetical protein | phrog_2793 | unknown function | unknown function | 1 | 47867 | 48100 |
| AOT24028.1 | KX611831_p122 | hypothetical protein | phrog_3016 | unknown function | unknown function | 1 | 68703 | 68837 |
| AOT23984.1 | KX611831_p102 | hypothetical protein | phrog_1969 | unknown function | unknown function | 1 | 61854 | 62165 |
| AOT23949.1 | KX611831_p66 | ERF family ssDNA binding protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 45453 | 46175 |
| AOT23979.1 | KX611831_p97 | ssDNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 59671 | 60111 |
| AOT24015.1 | KX611831_p134 | hypothetical protein | phrog_3174 | unknown function | unknown function | -1 | 73105 | 73497 |
| AOT23951.1 | KX611831_p68 | hypothetical protein | phrog_2771 | unknown function | unknown function | 1 | 46479 | 46949 |
| AOT23941.1 | KX611831_p57 | hypothetical protein | phrog_2463 | unknown function | unknown function | 1 | 41740 | 41886 |
| AOT23946.1 | KX611831_p63 | hypothetical protein | phrog_762 | unknown function | unknown function | 1 | 43687 | 44088 |
| AOT24027.1 | KX611831_p1 | hypothetical protein | phrog_3456 | unknown function | unknown function | 1 | 10 | 270 |
| AOT23945.1 | KX611831_p62 | hypothetical protein | phrog_2221 | unknown function | unknown function | 1 | 43377 | 43538 |
| AOT23904.1 | KX611831_p19 | major tail protein | phrog_476 | major tail protein | tail | 1 | 11622 | 12596 |
| AOT23907.1 | KX611831_p21 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 13178 | 14121 |
| AOT23931.1 | KX611831_p46 | hypothetical protein | phrog_2702 | unknown function | unknown function | -1 | 36287 | 36502 |
| AOT23992.1 | KX611831_p110 | hypothetical protein | phrog_8804 | unknown function | unknown function | 1 | 65255 | 65464 |
| AOT23947.1 | KX611831_p64 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 44085 | 45053 |
| AOT23970.1 | KX611831_p88 | RNA ligase | phrog_968 | RNA ligase | DNA, RNA and nucleotide metabolism | 1 | 54493 | 55818 |
| AOT24025.1 | KX611831_p60 | hypothetical protein | phrog_3463 | unknown function | unknown function | 1 | 43029 | 43136 |
| AOT23918.1 | KX611831_p33 | lysin A | phrog_317 | endolysin | lysis | 1 | 30421 | 31923 |
| AOT23968.1 | KX611831_p85 | polynucleotide kinase | phrog_505 | polynucleotide kinase | other | 1 | 52985 | 53926 |
| AOT24007.1 | KX611831_p126 | hypothetical protein | phrog_3034 | unknown function | unknown function | -1 | 70242 | 70610 |
| AOT23950.1 | KX611831_p67 | hypothetical protein | phrog_2750 | unknown function | unknown function | 1 | 46168 | 46479 |
| AOT24018.1 | KX611831_p137 | hypothetical protein | phrog_7581 | unknown function | unknown function | -1 | 73911 | 74123 |
| AOT23980.1 | KX611831_p98 | protease | phrog_94 | head maturation protease | head and packaging | 1 | 60200 | 61006 |
| AOT24001.1 | KX611831_p119 | hypothetical protein | phrog_2823 | unknown function | unknown function | 1 | 68051 | 68251 |
| AOT23906.1 | KX611831_p22 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 13178 | 13711 |
| AOT23922.1 | KX611831_p37 | hypothetical protein | phrog_726 | unknown function | unknown function | 1 | 33492 | 33908 |
| AOT23896.1 | KX611831_p11 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 5183 | 6742 |
| AOT23996.1 | KX611831_p114 | hypothetical protein | phrog_2965 | unknown function | unknown function | 1 | 66756 | 66893 |
| AOT23942.1 | KX611831_p58 | hypothetical protein | phrog_2800 | unknown function | unknown function | 1 | 41883 | 42161 |
| AOT23909.1 | KX611831_p24 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 18877 | 20538 |
| AOT24019.1 | KX611831_p138 | hypothetical protein | phrog_2795 | unknown function | unknown function | -1 | 74120 | 74320 |
| AOT23954.1 | KX611831_p71 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 47691 | 47864 |
| AOT23953.1 | KX611831_p70 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 47314 | 47691 |
| AOT23888.1 | KX611831_p3 | hypothetical protein | phrog_2829 | unknown function | unknown function | 1 | 446 | 604 |
| AOT23928.1 | KX611831_p43 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 35721 | 35894 |
| AOT23890.1 | KX611831_p5 | hypothetical protein | phrog_3858 | unknown function | unknown function | 1 | 783 | 1064 |
| AOT24021.1 | KX611831_p140 | hypothetical protein | phrog_2904 | unknown function | unknown function | 1 | 74553 | 74912 |
| AOT23971.1 | KX611831_p89 | helix-turn-helix DNA binding domain protein | phrog_1590 | unknown function | unknown function | 1 | 55855 | 56676 |
| AOT23948.1 | KX611831_p65 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 45050 | 45460 |
| AOT23993.1 | KX611831_p111 | hypothetical protein | phrog_6210 | unknown function | unknown function | 1 | 65461 | 65550 |
| AOT23963.1 | KX611831_p80 | hypothetical protein | phrog_1821 | transcriptional regulator WhiB-like | transcription regulation | 1 | 51466 | 51726 |
| AOT23891.1 | KX611831_p6 | terminase small subunit | phrog_83 | terminase small subunit | head and packaging | 1 | 1057 | 1518 |
| AOT23913.1 | KX611831_p28 | D-ala D-ala carboxypeptidase | phrog_382 | minor tail protein with lysin activity | tail | 1 | 25457 | 28297 |
| AOT23958.1 | KX611831_p75 | hypothetical protein | phrog_1673 | unknown function | unknown function | 1 | 48814 | 49050 |
| AOT23900.1 | KX611831_p15 | head-to-tail connector protein | phrog_442 | head-tail adaptor | connector | 1 | 9920 | 10486 |
| AOT23929.1 | KX611831_p44 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 35894 | 36061 |
| AOT23932.1 | KX611831_p47 | hypothetical protein | phrog_2815 | unknown function | unknown function | -1 | 36521 | 36667 |
| AOT23912.1 | KX611831_p27 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 23064 | 25460 |
| AOT23901.1 | KX611831_p16 | head-to-tail connector protein | phrog_1531 | head closure | connector | 1 | 10501 | 10836 |
| AOT24004.1 | KX611831_p123 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 69216 | 69479 |
| AOT23964.1 | KX611831_p81 | hypothetical protein | phrog_2747 | unknown function | unknown function | 1 | 51701 | 51922 |
| AOT23943.1 | KX611831_p59 | hypothetical protein | phrog_2744 | unknown function | unknown function | 1 | 42705 | 43010 |
| AOT23944.1 | KX611831_p61 | hypothetical protein | phrog_2147 | unknown function | unknown function | 1 | 43144 | 43377 |
| AOT24005.1 | KX611831_p124 | hypothetical protein | phrog_2579 | ParB C-terminal domain | DNA, RNA and nucleotide metabolism | -1 | 69476 | 69865 |
| AOT23892.1 | KX611831_p7 | hypothetical protein | phrog_2142 | unknown function | unknown function | 1 | 1511 | 1855 |
| AOT24026.1 | KX611831_p86 | hypothetical protein | phrog_2495 | unknown function | unknown function | 1 | 54033 | 54401 |
| AOT24008.1 | KX611831_p127 | hypothetical protein | phrog_1915 | unknown function | unknown function | -1 | 70607 | 71149 |
| AOT23924.1 | KX611831_p39 | DNA bridging protein | phrog_1223 | nucloid associated Lsr2-like | DNA, RNA and nucleotide metabolism | -1 | 34357 | 34743 |
| AOT23976.1 | KX611831_p94 | hypothetical protein | phrog_2788 | unknown function | unknown function | 1 | 57685 | 58020 |
| AOT23914.1 | KX611831_p29 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 28298 | 29260 |
| AOT23978.1 | KX611831_p96 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 58556 | 59674 |
| AOT23921.1 | KX611831_p36 | lysin B | phrog_102 | endolysin | lysis | 1 | 32638 | 33495 |
| AOT23990.1 | KX611831_p108 | DNA polymerase III subunit | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 64324 | 65109 |
| AOT23937.1 | KX611831_p53 | immunity repressor | phrog_2745 | transcriptional repressor | transcription regulation | -1 | 40007 | 40447 |
| AOT23988.1 | KX611831_p106 | hydrolase | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 63457 | 63831 |
| AOT24011.1 | KX611831_p130 | hypothetical protein | phrog_4547 | unknown function | unknown function | -1 | 71863 | 72180 |
| AOT23919.1 | KX611831_p34 | holin | phrog_526 | holin | lysis | 1 | 31927 | 32310 |
| AOT23916.1 | KX611831_p31 | helix-turn-helix DNA binding domain protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 29745 | 29930 |
| AOT24012.1 | KX611831_p131 | hypothetical protein | phrog_3730 | unknown function | unknown function | -1 | 72186 | 72311 |
| AOT23898.1 | KX611831_p13 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 8125 | 9618 |
| AOT23974.1 | KX611831_p92 | hypothetical protein | phrog_889 | unknown function | unknown function | 1 | 57105 | 57557 |
| AOT24009.1 | KX611831_p128 | hypothetical protein | phrog_9837 | unknown function | unknown function | -1 | 71154 | 71516 |
| AOT23887.1 | KX611831_p2 | hypothetical protein | phrog_4110 | unknown function | unknown function | 1 | 267 | 449 |
| AOT23997.1 | KX611831_p115 | hypothetical protein | phrog_2755 | unknown function | unknown function | 1 | 66880 | 67053 |
| AOT23908.1 | KX611831_p23 | tape measure protein | phrog_2723 | tail length tape measure protein | tail | 1 | 14114 | 18847 |
| AOT23991.1 | KX611831_p109 | hypothetical protein | phrog_3647 | unknown function | unknown function | 1 | 65106 | 65258 |
| AOT23975.1 | KX611831_p93 | hypothetical protein | phrog_7833 | unknown function | unknown function | 1 | 57561 | 57683 |
| AOT23897.1 | KX611831_p12 | capsid maturation protease | phrog_2753 | head maturation protease | head and packaging | 1 | 6745 | 8037 |
| AOT23977.1 | KX611831_p95 | hypothetical protein | phrog_1568 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 58017 | 58559 |
| AOT23917.1 | KX611831_p32 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 30063 | 30347 |
| AOT23895.1 | KX611831_p10 | hypothetical protein | phrog_2845 | unknown function | unknown function | 1 | 4978 | 5199 |
| AOT23923.1 | KX611831_p38 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 33915 | 34160 |
| AOT23899.1 | KX611831_p14 | hypothetical protein | phrog_2796 | head-tail connector protein | connector | 1 | 9741 | 9920 |
| AOT24003.1 | KX611831_p121 | hypothetical protein | phrog_2897 | unknown function | unknown function | 1 | 68561 | 68692 |
| AOT23926.1 | KX611831_p41 | hypothetical protein | phrog_647 | unknown function | unknown function | -1 | 34985 | 35452 |
| AOT23889.1 | KX611831_p4 | hypothetical protein | phrog_2775 | unknown function | unknown function | 1 | 601 | 786 |