Genomic map of Mycobacterium phage Pharsalus (KX611831)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX611831
Definition
Mycobacterium phage Pharsalus, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus; unclassified Kostyavirus.
DB of origin
NUCCORE
Length
75779
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
142
%GC
63.01
Number of singletons
0
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AOT24000.1 KX611831_p118 hypothetical protein phrog_2764 unknown function unknown function 1 67900 68067
AOT23999.1 KX611831_p117 hypothetical protein phrog_2174 unknown function unknown function 1 67442 67903
AOT23936.1 KX611831_p51 hypothetical protein phrog_2842 unknown function unknown function 1 38922 39161
AOT23959.1 KX611831_p76 hypothetical protein phrog_1882 unknown function unknown function 1 49047 49697
AOT24022.1 KX611831_p141 hypothetical protein phrog_2762 unknown function unknown function 1 74987 75208
AOT23894.1 KX611831_p9 terminase large subunit phrog_9 terminase large subunit head and packaging 1 2303 4966
AOT23994.1 KX611831_p112 hypothetical protein phrog_1941 unknown function unknown function 1 65547 65789
AOT23981.1 KX611831_p99 hypothetical protein phrog_1454 unknown function unknown function 1 61008 61205
AOT23957.1 KX611831_p74 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 48507 48824
AOT24002.1 KX611831_p120 hypothetical protein phrog_33413 unknown function unknown function 1 68253 68561
AOT24020.1 KX611831_p139 hypothetical protein phrog_8479 unknown function unknown function -1 74324 74524
AOT24016.1 KX611831_p135 hypothetical protein phrog_1438 unknown function unknown function -1 73502 73675
AOT23925.1 KX611831_p40 hypothetical protein phrog_3481 unknown function unknown function -1 34791 34988
AOT24006.1 KX611831_p125 hypothetical protein phrog_2942 unknown function unknown function -1 69985 70245
AOT23962.1 KX611831_p79 hypothetical protein phrog_1091 unknown function unknown function 1 51281 51469
AOT23927.1 KX611831_p42 hypothetical protein phrog_722 unknown function unknown function -1 35449 35724
AOT23989.1 KX611831_p107 hypothetical protein phrog_2252 endolysin; inhibits RNA polymerase lysis 1 63834 64313
AOT24013.1 KX611831_p132 hypothetical protein phrog_2287 unknown function unknown function -1 72301 72537
AOT24010.1 KX611831_p129 hypothetical protein phrog_1587 unknown function unknown function -1 71532 71861
AOT23966.1 KX611831_p83 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 52277 52639
AOT23939.1 KX611831_p55 hypothetical protein phrog_2852 unknown function unknown function 1 40759 40896
AOT23982.1 KX611831_p100 hypothetical protein phrog_2785 unknown function unknown function 1 61202 61558
AOT23920.1 KX611831_p35 hypothetical protein phrog_2424 unknown function unknown function 1 32303 32641
AOT23935.1 KX611831_p50 integrase phrog_1 integrase integration and excision 1 37902 38783
AOT23998.1 KX611831_p116 hypothetical protein phrog_2279 unknown function unknown function 1 67046 67258
AOT23961.1 KX611831_p78 dsDNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 50022 51284
AOT24024.1 KX611831_p52 hypothetical protein phrog_950 unknown function unknown function -1 39139 39912
AOT23965.1 KX611831_p82 hypothetical protein phrog_3836 unknown function unknown function 1 51915 52280
AOT24014.1 KX611831_p133 hypothetical protein phrog_2883 unknown function unknown function -1 72553 73101
AOT23934.1 KX611831_p49 hypothetical protein phrog_2847 unknown function unknown function -1 37349 37651
AOT23967.1 KX611831_p84 hypothetical protein phrog_2894 unknown function unknown function 1 52636 52830
AOT23902.1 KX611831_p17 hypothetical protein phrog_2805 minor tail protein tail 1 10833 11213
AOT24017.1 KX611831_p136 hypothetical protein phrog_2772 unknown function unknown function -1 73672 73908
AOT23893.1 KX611831_p8 hypothetical protein phrog_2202 unknown function unknown function -1 1956 2267
AOT24023.1 KX611831_p142 hypothetical protein phrog_8627 unknown function unknown function 1 75253 75666
AOT23956.1 KX611831_p73 hypothetical protein phrog_289 GTP-binding domain other 1 48097 48510
AOT23933.1 KX611831_p48 hypothetical protein phrog_2759 unknown function unknown function -1 36667 37062
AOT23915.1 KX611831_p30 hypothetical protein phrog_644 unknown function unknown function 1 29330 29758
AOT23930.1 KX611831_p45 hypothetical protein phrog_2893 unknown function unknown function -1 36058 36294
AOT23905.1 KX611831_p20 hypothetical protein phrog_5711 head fiber protein head and packaging 1 12656 13129
AOT23995.1 KX611831_p113 DNA recombinase phrog_97 UvsX-like recombinase other 1 65797 66759
AOT23952.1 KX611831_p69 hypothetical protein phrog_1389 unknown function unknown function 1 46946 47317
AOT23960.1 KX611831_p77 hypothetical protein phrog_572 unknown function unknown function 1 49694 50029
AOT23940.1 KX611831_p56 pentapeptide repeat protein phrog_923 unknown function unknown function 1 40893 41738
AOT23969.1 KX611831_p87 hypothetical protein phrog_2844 unknown function unknown function 1 54374 54496
AOT23983.1 KX611831_p101 hypothetical protein phrog_2757 unknown function unknown function 1 61559 61849
AOT23985.1 KX611831_p103 HNH endonuclease phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism 1 62218 62508
AOT23938.1 KX611831_p54 hypothetical protein phrog_3071 unknown function unknown function 1 40664 40762
AOT23903.1 KX611831_p18 hypothetical protein phrog_813 head-tail adaptor connector 1 11191 11595
AOT23987.1 KX611831_p105 hypothetical protein phrog_1042 unknown function unknown function 1 63183 63446
AOT23910.1 KX611831_p25 minor tail protein phrog_110 minor tail protein tail 1 20526 22205
AOT23973.1 KX611831_p91 hypothetical protein phrog_2853 unknown function unknown function 1 56950 57108
AOT23911.1 KX611831_p26 minor tail protein phrog_732 minor tail protein tail 1 22214 23047
AOT23972.1 KX611831_p90 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 56673 56933
AOT23986.1 KX611831_p104 hypothetical protein phrog_2846 unknown function unknown function 1 62890 63186
AOT23955.1 KX611831_p72 hypothetical protein phrog_2793 unknown function unknown function 1 47867 48100
AOT24028.1 KX611831_p122 hypothetical protein phrog_3016 unknown function unknown function 1 68703 68837
AOT23984.1 KX611831_p102 hypothetical protein phrog_1969 unknown function unknown function 1 61854 62165
AOT23949.1 KX611831_p66 ERF family ssDNA binding protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 45453 46175
AOT23979.1 KX611831_p97 ssDNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 59671 60111
AOT24015.1 KX611831_p134 hypothetical protein phrog_3174 unknown function unknown function -1 73105 73497
AOT23951.1 KX611831_p68 hypothetical protein phrog_2771 unknown function unknown function 1 46479 46949
AOT23941.1 KX611831_p57 hypothetical protein phrog_2463 unknown function unknown function 1 41740 41886
AOT23946.1 KX611831_p63 hypothetical protein phrog_762 unknown function unknown function 1 43687 44088
AOT24027.1 KX611831_p1 hypothetical protein phrog_3456 unknown function unknown function 1 10 270
AOT23945.1 KX611831_p62 hypothetical protein phrog_2221 unknown function unknown function 1 43377 43538
AOT23904.1 KX611831_p19 major tail protein phrog_476 major tail protein tail 1 11622 12596
AOT23907.1 KX611831_p21 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 13178 14121
AOT23931.1 KX611831_p46 hypothetical protein phrog_2702 unknown function unknown function -1 36287 36502
AOT23992.1 KX611831_p110 hypothetical protein phrog_8804 unknown function unknown function 1 65255 65464
AOT23947.1 KX611831_p64 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 44085 45053
AOT23970.1 KX611831_p88 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism 1 54493 55818
AOT24025.1 KX611831_p60 hypothetical protein phrog_3463 unknown function unknown function 1 43029 43136
AOT23918.1 KX611831_p33 lysin A phrog_317 endolysin lysis 1 30421 31923
AOT23968.1 KX611831_p85 polynucleotide kinase phrog_505 polynucleotide kinase other 1 52985 53926
AOT24007.1 KX611831_p126 hypothetical protein phrog_3034 unknown function unknown function -1 70242 70610
AOT23950.1 KX611831_p67 hypothetical protein phrog_2750 unknown function unknown function 1 46168 46479
AOT24018.1 KX611831_p137 hypothetical protein phrog_7581 unknown function unknown function -1 73911 74123
AOT23980.1 KX611831_p98 protease phrog_94 head maturation protease head and packaging 1 60200 61006
AOT24001.1 KX611831_p119 hypothetical protein phrog_2823 unknown function unknown function 1 68051 68251
AOT23906.1 KX611831_p22 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 13178 13711
AOT23922.1 KX611831_p37 hypothetical protein phrog_726 unknown function unknown function 1 33492 33908
AOT23896.1 KX611831_p11 portal protein phrog_12 portal protein head and packaging 1 5183 6742
AOT23996.1 KX611831_p114 hypothetical protein phrog_2965 unknown function unknown function 1 66756 66893
AOT23942.1 KX611831_p58 hypothetical protein phrog_2800 unknown function unknown function 1 41883 42161
AOT23909.1 KX611831_p24 minor tail protein phrog_106 minor tail protein tail 1 18877 20538
AOT24019.1 KX611831_p138 hypothetical protein phrog_2795 unknown function unknown function -1 74120 74320
AOT23954.1 KX611831_p71 hypothetical protein phrog_1622 unknown function unknown function 1 47691 47864
AOT23953.1 KX611831_p70 hypothetical protein phrog_572 unknown function unknown function 1 47314 47691
AOT23888.1 KX611831_p3 hypothetical protein phrog_2829 unknown function unknown function 1 446 604
AOT23928.1 KX611831_p43 hypothetical protein phrog_1155 unknown function unknown function -1 35721 35894
AOT23890.1 KX611831_p5 hypothetical protein phrog_3858 unknown function unknown function 1 783 1064
AOT24021.1 KX611831_p140 hypothetical protein phrog_2904 unknown function unknown function 1 74553 74912
AOT23971.1 KX611831_p89 helix-turn-helix DNA binding domain protein phrog_1590 unknown function unknown function 1 55855 56676
AOT23948.1 KX611831_p65 hypothetical protein phrog_572 unknown function unknown function 1 45050 45460
AOT23993.1 KX611831_p111 hypothetical protein phrog_6210 unknown function unknown function 1 65461 65550
AOT23963.1 KX611831_p80 hypothetical protein phrog_1821 transcriptional regulator WhiB-like transcription regulation 1 51466 51726
AOT23891.1 KX611831_p6 terminase small subunit phrog_83 terminase small subunit head and packaging 1 1057 1518
AOT23913.1 KX611831_p28 D-ala D-ala carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 25457 28297
AOT23958.1 KX611831_p75 hypothetical protein phrog_1673 unknown function unknown function 1 48814 49050
AOT23900.1 KX611831_p15 head-to-tail connector protein phrog_442 head-tail adaptor connector 1 9920 10486
AOT23929.1 KX611831_p44 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 35894 36061
AOT23932.1 KX611831_p47 hypothetical protein phrog_2815 unknown function unknown function -1 36521 36667
AOT23912.1 KX611831_p27 minor tail protein phrog_346 minor tail protein tail 1 23064 25460
AOT23901.1 KX611831_p16 head-to-tail connector protein phrog_1531 head closure connector 1 10501 10836
AOT24004.1 KX611831_p123 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 69216 69479
AOT23964.1 KX611831_p81 hypothetical protein phrog_2747 unknown function unknown function 1 51701 51922
AOT23943.1 KX611831_p59 hypothetical protein phrog_2744 unknown function unknown function 1 42705 43010
AOT23944.1 KX611831_p61 hypothetical protein phrog_2147 unknown function unknown function 1 43144 43377
AOT24005.1 KX611831_p124 hypothetical protein phrog_2579 ParB C-terminal domain DNA, RNA and nucleotide metabolism -1 69476 69865
AOT23892.1 KX611831_p7 hypothetical protein phrog_2142 unknown function unknown function 1 1511 1855
AOT24026.1 KX611831_p86 hypothetical protein phrog_2495 unknown function unknown function 1 54033 54401
AOT24008.1 KX611831_p127 hypothetical protein phrog_1915 unknown function unknown function -1 70607 71149
AOT23924.1 KX611831_p39 DNA bridging protein phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism -1 34357 34743
AOT23976.1 KX611831_p94 hypothetical protein phrog_2788 unknown function unknown function 1 57685 58020
AOT23914.1 KX611831_p29 hypothetical protein phrog_553 minor tail protein tail 1 28298 29260
AOT23978.1 KX611831_p96 DNA methylase phrog_67 DNA methyltransferase other 1 58556 59674
AOT23921.1 KX611831_p36 lysin B phrog_102 endolysin lysis 1 32638 33495
AOT23990.1 KX611831_p108 DNA polymerase III subunit phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 64324 65109
AOT23937.1 KX611831_p53 immunity repressor phrog_2745 transcriptional repressor transcription regulation -1 40007 40447
AOT23988.1 KX611831_p106 hydrolase phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 63457 63831
AOT24011.1 KX611831_p130 hypothetical protein phrog_4547 unknown function unknown function -1 71863 72180
AOT23919.1 KX611831_p34 holin phrog_526 holin lysis 1 31927 32310
AOT23916.1 KX611831_p31 helix-turn-helix DNA binding domain protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 29745 29930
AOT24012.1 KX611831_p131 hypothetical protein phrog_3730 unknown function unknown function -1 72186 72311
AOT23898.1 KX611831_p13 major capsid protein phrog_10 major head protein head and packaging 1 8125 9618
AOT23974.1 KX611831_p92 hypothetical protein phrog_889 unknown function unknown function 1 57105 57557
AOT24009.1 KX611831_p128 hypothetical protein phrog_9837 unknown function unknown function -1 71154 71516
AOT23887.1 KX611831_p2 hypothetical protein phrog_4110 unknown function unknown function 1 267 449
AOT23997.1 KX611831_p115 hypothetical protein phrog_2755 unknown function unknown function 1 66880 67053
AOT23908.1 KX611831_p23 tape measure protein phrog_2723 tail length tape measure protein tail 1 14114 18847
AOT23991.1 KX611831_p109 hypothetical protein phrog_3647 unknown function unknown function 1 65106 65258
AOT23975.1 KX611831_p93 hypothetical protein phrog_7833 unknown function unknown function 1 57561 57683
AOT23897.1 KX611831_p12 capsid maturation protease phrog_2753 head maturation protease head and packaging 1 6745 8037
AOT23977.1 KX611831_p95 hypothetical protein phrog_1568 DNA binding protein DNA, RNA and nucleotide metabolism 1 58017 58559
AOT23917.1 KX611831_p32 hypothetical protein phrog_411 unknown function unknown function 1 30063 30347
AOT23895.1 KX611831_p10 hypothetical protein phrog_2845 unknown function unknown function 1 4978 5199
AOT23923.1 KX611831_p38 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 33915 34160
AOT23899.1 KX611831_p14 hypothetical protein phrog_2796 head-tail connector protein connector 1 9741 9920
AOT24003.1 KX611831_p121 hypothetical protein phrog_2897 unknown function unknown function 1 68561 68692
AOT23926.1 KX611831_p41 hypothetical protein phrog_647 unknown function unknown function -1 34985 35452
AOT23889.1 KX611831_p4 hypothetical protein phrog_2775 unknown function unknown function 1 601 786