| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX620751 |
Definition |
Propionibacterium phage Doucette, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Doucettevirus; Propionibacterium virus Doucette. |
DB of origin |
NUCCORE |
Length |
37429 |
Host Name |
Propionibacterium freudenreichii |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
61 |
%GC |
65.58 |
Number of singletons |
3 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AOT24442.1 | KX620751_p29 | hypothetical protein | phrog_4738 | transcriptional repressor | transcription regulation | -1 | 21364 | 21558 |
| AOT24473.1 | KX620751_p60 | hypothetical protein | phrog_20395 | unknown function | unknown function | 1 | 36742 | 37035 |
| AOT24423.1 | KX620751_p10 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 7168 | 7509 |
| AOT24422.1 | KX620751_p9 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 6791 | 7171 |
| AOT24461.1 | KX620751_p48 | hypothetical protein | phrog_19369 | unknown function | unknown function | 1 | 32121 | 32414 |
| AOT24433.1 | KX620751_p20 | hypothetical protein | phrog_14767 | unknown function | unknown function | 1 | 16185 | 16796 |
| AOT24449.1 | KX620751_p36 | hypothetical protein | phrog_16396 | unknown function | unknown function | 1 | 25992 | 26207 |
| AOT24416.1 | KX620751_p3 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 956 | 2410 |
| AOT24429.1 | KX620751_p16 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 9832 | 13926 |
| AOT24415.1 | KX620751_p2 | hypothetical protein | phrog_1459 | terminase small subunit | head and packaging | 1 | 706 | 1002 |
| AOT24446.1 | KX620751_p33 | immunity repressor | phrog_3 | transcriptional repressor | transcription regulation | -1 | 24463 | 24717 |
| AOT24450.1 | KX620751_p37 | hypothetical protein | phrog_16314 | unknown function | unknown function | 1 | 26200 | 26346 |
| AOT24428.1 | KX620751_p15 | hypothetical protein | phrog_5813 | tail assembly chaperone | tail | 1 | 9437 | 9805 |
| AOT24448.1 | KX620751_p35 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 25113 | 25916 |
| AOT24426.1 | KX620751_p13 | hypothetical protein | phrog_476 | major tail protein | tail | 1 | 8124 | 8987 |
| AOT24440.1 | KX620751_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 20775 | 20912 |
| AOT24465.1 | KX620751_p52 | hypothetical protein | phrog_16038 | unknown function | unknown function | 1 | 33897 | 34244 |
| AOT24432.1 | KX620751_p19 | hypothetical protein | phrog_15543 | unknown function | unknown function | 1 | 15912 | 16142 |
| AOT24436.1 | KX620751_p23 | hypothetical protein | phrog_12141 | unknown function | unknown function | 1 | 18969 | 19244 |
| AOT24438.1 | KX620751_p25 | membrane protein | phrog_22388 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 20185 | 20523 |
| AOT24441.1 | KX620751_p28 | hypothetical protein | singleton | unknown function | unknown function | -1 | 20994 | 21260 |
| AOT24451.1 | KX620751_p38 | hypothetical protein | phrog_8332 | unknown function | unknown function | 1 | 26431 | 27153 |
| AOT24427.1 | KX620751_p14 | hypothetical protein | phrog_1526 | unknown function | unknown function | 1 | 9084 | 9437 |
| AOT24467.1 | KX620751_p54 | hypothetical protein | phrog_9864 | unknown function | unknown function | 1 | 34767 | 34997 |
| AOT24463.1 | KX620751_p50 | RusA | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 32710 | 33090 |
| AOT24466.1 | KX620751_p53 | single-stranded DNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 34241 | 34705 |
| AOT24430.1 | KX620751_p17 | hypothetical protein | phrog_11649 | tail protein | tail | 1 | 13928 | 14743 |
| AOT24472.1 | KX620751_p59 | hypothetical protein | phrog_20396 | unknown function | unknown function | 1 | 36384 | 36599 |
| AOT24418.1 | KX620751_p5 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3905 | 4690 |
| AOT24444.1 | KX620751_p31 | integrase | phrog_1 | integrase | integration and excision | 1 | 22357 | 23664 |
| AOT24470.1 | KX620751_p57 | hypothetical protein | phrog_22371 | unknown function | unknown function | 1 | 35472 | 35555 |
| AOT24431.1 | KX620751_p18 | tail protein | phrog_1887 | tail protein | tail | 1 | 14743 | 15915 |
| AOT24457.1 | KX620751_p44 | hypothetical protein | phrog_11615 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 29983 | 30543 |
| AOT24435.1 | KX620751_p22 | membrane protein | phrog_10606 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 18526 | 18972 |
| AOT24459.1 | KX620751_p46 | DNA methylase | phrog_111 | DNA methyltransferase | other | 1 | 30761 | 31597 |
| AOT24454.1 | KX620751_p41 | RecT-like DNA pairing protein | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 28699 | 29496 |
| AOT24419.1 | KX620751_p6 | hypothetical protein | phrog_19241 | unknown function | unknown function | 1 | 4949 | 5581 |
| AOT24424.1 | KX620751_p11 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 7502 | 7750 |
| AOT24455.1 | KX620751_p42 | hypothetical protein | phrog_16299 | unknown function | unknown function | 1 | 29493 | 29657 |
| AOT24447.1 | KX620751_p34 | hypothetical protein | phrog_4583 | transcriptional repressor | transcription regulation | 1 | 24811 | 25050 |
| AOT24425.1 | KX620751_p12 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 7747 | 8115 |
| AOT24420.1 | KX620751_p7 | capsid protein | phrog_1328 | major head protein | head and packaging | 1 | 5598 | 6578 |
| AOT24437.1 | KX620751_p24 | endolysin | phrog_291 | endolysin | lysis | 1 | 19289 | 20185 |
| AOT24474.1 | KX620751_p61 | HNH endonuclease | phrog_8828 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 37032 | 37370 |
| AOT24414.1 | KX620751_p1 | hypothetical protein | phrog_8643 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 316 | 690 |
| AOT24462.1 | KX620751_p49 | hypothetical protein | phrog_16347 | unknown function | unknown function | 1 | 32411 | 32713 |
| AOT24458.1 | KX620751_p45 | hypothetical protein | phrog_14680 | unknown function | unknown function | 1 | 30540 | 30764 |
| AOT24471.1 | KX620751_p58 | hypothetical protein | phrog_8013 | unknown function | unknown function | 1 | 35555 | 36280 |
| AOT24469.1 | KX620751_p56 | hypothetical protein | phrog_18006 | unknown function | unknown function | 1 | 35197 | 35475 |
| AOT24417.1 | KX620751_p4 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2407 | 3918 |
| AOT24445.1 | KX620751_p32 | hypothetical protein | phrog_23043 | unknown function | unknown function | -1 | 23739 | 24233 |
| AOT24434.1 | KX620751_p21 | minor tail protein | phrog_18920 | tail protein | tail | 1 | 16796 | 18529 |
| AOT24464.1 | KX620751_p51 | hypothetical protein | phrog_3926 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 33311 | 33733 |
| AOT24452.1 | KX620751_p39 | hypothetical protein | phrog_8332 | unknown function | unknown function | 1 | 27150 | 27779 |
| AOT24460.1 | KX620751_p47 | hypothetical protein | phrog_23732 | unknown function | unknown function | 1 | 31594 | 32124 |
| AOT24439.1 | KX620751_p26 | hypothetical protein | singleton | unknown function | unknown function | 1 | 20552 | 20788 |
| AOT24468.1 | KX620751_p55 | hypothetical protein | phrog_25716 | unknown function | unknown function | 1 | 35000 | 35200 |
| AOT24456.1 | KX620751_p43 | WhiB | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 29654 | 29986 |
| AOT24421.1 | KX620751_p8 | hypothetical protein | phrog_20622 | unknown function | unknown function | 1 | 6604 | 6804 |
| AOT24443.1 | KX620751_p30 | hypothetical protein | phrog_28037 | unknown function | unknown function | -1 | 21671 | 21853 |
| AOT24453.1 | KX620751_p40 | RecE-like exonuclease | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 27776 | 28702 |