| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX620753 |
Definition |
Propionibacterium phage E6, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Doucettevirus; Propionibacterium virus E6. |
DB of origin |
NUCCORE |
Length |
38067 |
Host Name |
Propionibacterium freudenreichii |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
60 |
%GC |
65.2 |
Number of singletons |
4 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AOT24588.1 | KX620753_p60 | HNH endonuclease | phrog_8828 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 37670 | 38008 |
| AOT24552.1 | KX620753_p23 | membrane protein | phrog_10606 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 18532 | 18978 |
| AOT24553.1 | KX620753_p24 | hypothetical protein | phrog_12141 | unknown function | unknown function | 1 | 18975 | 19250 |
| AOT24572.1 | KX620753_p43 | hypothetical protein | phrog_16299 | unknown function | unknown function | 1 | 30903 | 31067 |
| AOT24563.1 | KX620753_p34 | HTH DNA binding protein | phrog_4583 | transcriptional repressor | transcription regulation | -1 | 25824 | 26093 |
| AOT24555.1 | KX620753_p26 | membrane protein | phrog_22388 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 20191 | 20529 |
| AOT24559.1 | KX620753_p30 | immunity repressor | phrog_3 | transcriptional repressor | transcription regulation | -1 | 22813 | 23058 |
| AOT24585.1 | KX620753_p57 | hypothetical protein | phrog_8013 | unknown function | unknown function | 1 | 36201 | 36926 |
| AOT24539.1 | KX620753_p10 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 6842 | 7222 |
| AOT24536.1 | KX620753_p7 | hypothetical protein | phrog_19241 | unknown function | unknown function | 1 | 5000 | 5632 |
| AOT24574.1 | KX620753_p45 | DNA binding domain protein | phrog_11615 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 31393 | 31959 |
| AOT24562.1 | KX620753_p33 | DNA binding domain protein | singleton | unknown function | unknown function | -1 | 24101 | 25699 |
| AOT24551.1 | KX620753_p22 | minor tail protein | phrog_18920 | tail protein | tail | 1 | 16844 | 18535 |
| AOT24568.1 | KX620753_p39 | hypothetical protein | phrog_8332 | unknown function | unknown function | 1 | 27788 | 28534 |
| AOT24544.1 | KX620753_p15 | hypothetical protein | phrog_1526 | unknown function | unknown function | 1 | 9087 | 9485 |
| AOT24533.1 | KX620753_p4 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2408 | 3919 |
| AOT24538.1 | KX620753_p9 | hypothetical protein | phrog_20622 | unknown function | unknown function | 1 | 6655 | 6855 |
| AOT24566.1 | KX620753_p37 | hypothetical protein | phrog_16396 | unknown function | unknown function | 1 | 27349 | 27564 |
| AOT24540.1 | KX620753_p11 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 7219 | 7560 |
| AOT24575.1 | KX620753_p46 | hypothetical protein | phrog_37435 | unknown function | unknown function | 1 | 31956 | 32192 |
| AOT24586.1 | KX620753_p58 | hypothetical protein | phrog_20396 | unknown function | unknown function | 1 | 37004 | 37237 |
| AOT24565.1 | KX620753_p36 | antirepressor, P22 ANT-like | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 26500 | 27273 |
| AOT24548.1 | KX620753_p19 | minor tail protein | phrog_1887 | tail protein | tail | 1 | 14791 | 15963 |
| AOT24583.1 | KX620753_p55 | transposase DNA binding domain protein | phrog_506 | transposase | integration and excision | 1 | 34853 | 36001 |
| AOT24537.1 | KX620753_p8 | capsid protein | phrog_1328 | major head protein | head and packaging | 1 | 5649 | 6629 |
| AOT24550.1 | KX620753_p21 | hypothetical protein | phrog_14767 | unknown function | unknown function | 1 | 16233 | 16844 |
| AOT24547.1 | KX620753_p18 | minor tail protein | phrog_11649 | tail protein | tail | 1 | 13976 | 14791 |
| AOT24584.1 | KX620753_p56 | hypothetical protein | phrog_25581 | unknown function | unknown function | 1 | 36086 | 36214 |
| AOT24549.1 | KX620753_p20 | hypothetical protein | phrog_15543 | unknown function | unknown function | 1 | 15960 | 16190 |
| AOT24532.1 | KX620753_p3 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 957 | 2411 |
| AOT24561.1 | KX620753_p32 | antirepressor, P22 ANT-like | phrog_524 | anti-repressor Ant | transcription regulation | 1 | 23445 | 23915 |
| AOT24554.1 | KX620753_p25 | endolysin | phrog_291 | endolysin | lysis | 1 | 19295 | 20191 |
| AOT24545.1 | KX620753_p16 | hypothetical protein | phrog_5813 | tail assembly chaperone | tail | 1 | 9485 | 9853 |
| AOT24573.1 | KX620753_p44 | WhiB | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 31064 | 31396 |
| AOT24564.1 | KX620753_p35 | HTH DNA binding protein | phrog_4583 | transcriptional repressor | transcription regulation | 1 | 26171 | 26422 |
| AOT24579.1 | KX620753_p50 | hypothetical protein | phrog_3926 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 33161 | 33526 |
| AOT24577.1 | KX620753_p48 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 32434 | 32817 |
| AOT24567.1 | KX620753_p38 | hypothetical protein | phrog_16314 | unknown function | unknown function | 1 | 27557 | 27703 |
| AOT24587.1 | KX620753_p59 | hypothetical protein | phrog_20395 | unknown function | unknown function | 1 | 37380 | 37673 |
| AOT24580.1 | KX620753_p52 | hypothetical protein | phrog_16038 | unknown function | unknown function | 1 | 33716 | 34063 |
| AOT24530.1 | KX620753_p1 | hypothetical protein | phrog_8643 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 316 | 690 |
| AOT24578.1 | KX620753_p49 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 32814 | 33161 |
| AOT24535.1 | KX620753_p6 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4686 | 4844 |
| AOT24543.1 | KX620753_p14 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 8175 | 9035 |
| AOT24581.1 | KX620753_p53 | single-stranded DNA binding domain protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 34060 | 34527 |
| AOT24589.1 | KX620753_p51 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33507 | 33719 |
| AOT24576.1 | KX620753_p47 | hypothetical protein | phrog_24019 | unknown function | unknown function | 1 | 32189 | 32437 |
| AOT24558.1 | KX620753_p29 | hypothetical protein | phrog_23410 | unknown function | unknown function | -1 | 22326 | 22751 |
| AOT24570.1 | KX620753_p41 | RecE-like protein | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 29214 | 30065 |
| AOT24571.1 | KX620753_p42 | RecT-like domain protein | phrog_561 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 30067 | 30906 |
| AOT24546.1 | KX620753_p17 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 9880 | 13974 |
| AOT24582.1 | KX620753_p54 | hypothetical protein | phrog_9864 | unknown function | unknown function | 1 | 34589 | 34819 |
| AOT24531.1 | KX620753_p2 | DNA binding protein | phrog_1459 | terminase small subunit | head and packaging | 1 | 707 | 1003 |
| AOT24569.1 | KX620753_p40 | hypothetical protein | phrog_8332 | unknown function | unknown function | 1 | 28531 | 29217 |
| AOT24542.1 | KX620753_p13 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 7798 | 8166 |
| AOT24534.1 | KX620753_p5 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3906 | 4670 |
| AOT24560.1 | KX620753_p31 | HTH DNA binding domain protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 23144 | 23386 |
| AOT24557.1 | KX620753_p28 | integrase | phrog_1 | integrase | integration and excision | 1 | 20940 | 22259 |
| AOT24556.1 | KX620753_p27 | hypothetical protein | singleton | unknown function | unknown function | -1 | 20564 | 20680 |
| AOT24541.1 | KX620753_p12 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 7553 | 7801 |