Genomic map of Mycobacterium phage Kalpine (KX641263)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX641263
Definition
Mycobacterium phage Kalpine, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
53330
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
96
%GC
64.36
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AOT25007.1 KX641263_p86 hypothetical protein phrog_828 unknown function unknown function -1 49088 49294
AOT24946.1 KX641263_p24 hypothetical protein phrog_117 major tail protein tail 1 16884 17477
AOT24933.1 KX641263_p11 holin phrog_526 holin lysis 1 7796 8218
AOT25008.1 KX641263_p87 hypothetical protein phrog_9713 unknown function unknown function -1 49291 49362
AOT24937.1 KX641263_p15 capsid maturation protease phrog_193 head maturation protease head and packaging 1 12489 13340
AOT25010.1 KX641263_p89 hypothetical protein phrog_586 unknown function unknown function -1 49712 50068
AOT24923.1 KX641263_p1 hypothetical protein singleton unknown function unknown function 1 280 444
AOT24935.1 KX641263_p13 terminase phrog_9 terminase large subunit head and packaging 1 9215 11002
AOT24992.1 KX641263_p71 RecB-like exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 43903 44727
AOT24964.1 KX641263_p42 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 30186 31973
AOT24952.1 KX641263_p30 hypothetical protein phrog_352 minor tail protein tail 1 23773 24219
AOT24970.1 KX641263_p48 hypothetical protein phrog_2046 unknown function unknown function -1 35974 36165
AOT24995.1 KX641263_p74 hypothetical protein phrog_1173 unknown function unknown function -1 45996 46163
AOT24993.1 KX641263_p72 hypothetical protein phrog_1562 unknown function unknown function -1 44724 45137
AOT24963.1 KX641263_p41 hypothetical protein phrog_896 unknown function unknown function -1 29934 30155
AOT24987.1 KX641263_p66 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 42228 43034
AOT25001.1 KX641263_p80 hypothetical protein phrog_1875 unknown function unknown function -1 47282 47524
AOT24944.1 KX641263_p22 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 16095 16430
AOT25014.1 KX641263_p93 hypothetical protein phrog_3207 unknown function unknown function -1 50725 50991
AOT24967.1 KX641263_p45 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 32599 33330
AOT24959.1 KX641263_p37 hypothetical protein phrog_542 unknown function unknown function -1 28853 29026
AOT24931.1 KX641263_p9 hypothetical protein phrog_1087 unknown function unknown function 1 6346 6504
AOT24969.1 KX641263_p47 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 33940 35973
AOT24949.1 KX641263_p27 tape measure protein phrog_305 tail length tape measure protein tail 1 18405 20942
AOT24978.1 KX641263_p57 hypothetical protein phrog_1370 unknown function unknown function -1 39387 39521
AOT24925.1 KX641263_p3 hypothetical protein phrog_4491 unknown function unknown function 1 2258 2563
AOT24965.1 KX641263_p43 hypothetical protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 31982 32395
AOT24924.1 KX641263_p2 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 643 1410
AOT24938.1 KX641263_p16 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 13392 13916
AOT25003.1 KX641263_p82 hypothetical protein phrog_1477 unknown function unknown function -1 47751 47882
AOT24927.1 KX641263_p5 hypothetical protein phrog_226 minor tail protein tail 1 2894 3364
AOT24954.1 KX641263_p32 minor tail protein phrog_737 minor tail protein tail 1 24570 26348
AOT24943.1 KX641263_p21 hypothetical protein phrog_320 head closure Hc1 connector 1 15727 16095
AOT24999.1 KX641263_p78 hypothetical protein singleton unknown function unknown function -1 46870 47019
AOT24989.1 KX641263_p68 hypothetical protein phrog_520 unknown function unknown function -1 43178 43417
AOT24971.1 KX641263_p49 hypothetical protein phrog_499 unknown function unknown function -1 36162 36341
AOT24977.1 KX641263_p55 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38466 39098
AOT24953.1 KX641263_p31 hypothetical protein phrog_404 minor tail protein tail 1 24261 24569
AOT24982.1 KX641263_p61 hypothetical protein phrog_13419 unknown function unknown function -1 40929 41081
AOT24958.1 KX641263_p36 hypothetical protein phrog_13926 unknown function unknown function -1 28645 28845
AOT24994.1 KX641263_p73 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 45198 45776
AOT25005.1 KX641263_p84 hypothetical protein phrog_421 unknown function unknown function -1 48190 48951
AOT24940.1 KX641263_p18 hypothetical protein phrog_748 head-tail connector protein connector 1 14973 15155
AOT24945.1 KX641263_p23 hypothetical protein phrog_123 tail terminator connector 1 16439 16873
AOT24961.1 KX641263_p39 hypothetical protein phrog_2099 unknown function unknown function -1 29414 29680
AOT24939.1 KX641263_p17 major capsid protein phrog_10 major head protein head and packaging 1 13947 14903
AOT24986.1 KX641263_p65 hypothetical protein phrog_1374 unknown function unknown function -1 42019 42195
AOT24955.1 KX641263_p33 integrase phrog_1 integrase integration and excision -1 26410 27525
AOT24936.1 KX641263_p14 portal protein phrog_104 portal protein head and packaging 1 10999 12459
AOT24981.1 KX641263_p60 esterase/lipase phrog_789 esterase/lipase other -1 40096 40941
AOT24991.1 KX641263_p70 hypothetical protein phrog_642 unknown function unknown function -1 43637 43855
AOT24980.1 KX641263_p59 hypothetical protein phrog_2187 unknown function unknown function -1 39965 40096
AOT24990.1 KX641263_p69 hypothetical protein phrog_666 unknown function unknown function -1 43446 43640
AOT25012.1 KX641263_p91 hypothetical protein phrog_1946 unknown function unknown function -1 50229 50429
AOT25000.1 KX641263_p79 hypothetical protein phrog_3963 unknown function unknown function -1 47016 47285
AOT24976.1 KX641263_p54 hypothetical protein phrog_2264 unknown function unknown function -1 38380 38466
AOT24983.1 KX641263_p62 hypothetical protein phrog_1123 unknown function unknown function -1 41081 41338
AOT24942.1 KX641263_p20 hypothetical protein phrog_830 head-tail connector protein connector 1 15533 15727
AOT24947.1 KX641263_p26 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 17586 17990
AOT24960.1 KX641263_p38 hypothetical protein phrog_383 unknown function unknown function -1 29023 29427
AOT24975.1 KX641263_p53 hypothetical protein phrog_1167 phosphofructokinase other -1 37931 38383
AOT25011.1 KX641263_p90 hypothetical protein phrog_519 unknown function unknown function -1 50065 50232
AOT25017.1 KX641263_p96 hypothetical protein phrog_1676 unknown function unknown function -1 51862 52161
AOT24934.1 KX641263_p12 lysin B phrog_102 endolysin lysis 1 8215 9192
AOT24966.1 KX641263_p44 hypothetical protein phrog_690 unknown function unknown function -1 32392 32595
AOT24941.1 KX641263_p19 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 15159 15536
AOT24951.1 KX641263_p29 minor tail protein phrog_110 minor tail protein tail 1 21962 23758
AOT24996.1 KX641263_p75 hypothetical protein phrog_4294 unknown function unknown function -1 46291 46449
AOT24988.1 KX641263_p67 hypothetical protein phrog_2731 unknown function unknown function -1 43044 43181
AOT24968.1 KX641263_p46 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 33407 33928
AOT25015.1 KX641263_p94 hypothetical protein phrog_1392 unknown function unknown function -1 51000 51710
AOT24973.1 KX641263_p51 hypothetical protein phrog_2436 unknown function unknown function -1 37009 37161
AOT24929.1 KX641263_p7 minor tail protein phrog_819 tail protein tail 1 4413 5363
AOT25009.1 KX641263_p88 hypothetical protein phrog_12268 unknown function unknown function -1 49359 49691
AOT25013.1 KX641263_p92 hypothetical protein phrog_8476 unknown function unknown function -1 50429 50725
AOT24979.1 KX641263_p58 EndoVII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39547 40011
AOT25018.1 KX641263_p56 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38926 39348
AOT24928.1 KX641263_p6 minor tail protein phrog_1260 minor tail protein tail 1 3451 4413
AOT24956.1 KX641263_p34 DNA binding domain protein phrog_733 excisionase integration and excision 1 27903 28334
AOT24985.1 KX641263_p64 hypothetical protein phrog_5101 unknown function unknown function -1 41714 42022
AOT24984.1 KX641263_p63 hypothetical protein phrog_397 unknown function unknown function -1 41335 41568
AOT24974.1 KX641263_p52 phosphoesterase phrog_221 metallo-phosphoesterase other -1 37164 37934
AOT24998.1 KX641263_p77 hypothetical protein phrog_8490 unknown function unknown function -1 46727 46867
AOT25002.1 KX641263_p81 hypothetical protein phrog_3351 unknown function unknown function -1 47521 47754
AOT24926.1 KX641263_p4 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2560 2856
AOT24930.1 KX641263_p8 hypothetical protein phrog_356 minor tail protein tail 1 5367 6047
AOT24997.1 KX641263_p76 hypothetical protein phrog_4569 unknown function unknown function -1 46449 46727
AOT25006.1 KX641263_p85 hypothetical protein phrog_855 unknown function unknown function -1 48948 49082
AOT24972.1 KX641263_p50 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 36338 37009
AOT24962.1 KX641263_p40 hypothetical protein phrog_3283 unknown function unknown function -1 29704 29934
AOT24932.1 KX641263_p10 lysin A phrog_317 endolysin lysis 1 6504 7799
AOT25004.1 KX641263_p83 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 47882 48190
AOT24948.1 KX641263_p25 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 17586 18415
AOT24957.1 KX641263_p35 HTH DNA binding domain protein phrog_66 excisionase and transcriptional regulator integration and excision -1 28461 28631
AOT25016.1 KX641263_p95 hypothetical protein phrog_1445 unknown function unknown function -1 51754 51831
AOT24950.1 KX641263_p28 minor tail protein phrog_106 minor tail protein tail 1 20976 21989