| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX641263 |
Definition |
Mycobacterium phage Kalpine, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus. |
DB of origin |
NUCCORE |
Length |
53330 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
96 |
%GC |
64.36 |
Number of singletons |
2 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AOT25007.1 | KX641263_p86 | hypothetical protein | phrog_828 | unknown function | unknown function | -1 | 49088 | 49294 |
| AOT24946.1 | KX641263_p24 | hypothetical protein | phrog_117 | major tail protein | tail | 1 | 16884 | 17477 |
| AOT24933.1 | KX641263_p11 | holin | phrog_526 | holin | lysis | 1 | 7796 | 8218 |
| AOT25008.1 | KX641263_p87 | hypothetical protein | phrog_9713 | unknown function | unknown function | -1 | 49291 | 49362 |
| AOT24937.1 | KX641263_p15 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 12489 | 13340 |
| AOT25010.1 | KX641263_p89 | hypothetical protein | phrog_586 | unknown function | unknown function | -1 | 49712 | 50068 |
| AOT24923.1 | KX641263_p1 | hypothetical protein | singleton | unknown function | unknown function | 1 | 280 | 444 |
| AOT24935.1 | KX641263_p13 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 9215 | 11002 |
| AOT24992.1 | KX641263_p71 | RecB-like exonuclease | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 43903 | 44727 |
| AOT24964.1 | KX641263_p42 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 30186 | 31973 |
| AOT24952.1 | KX641263_p30 | hypothetical protein | phrog_352 | minor tail protein | tail | 1 | 23773 | 24219 |
| AOT24970.1 | KX641263_p48 | hypothetical protein | phrog_2046 | unknown function | unknown function | -1 | 35974 | 36165 |
| AOT24995.1 | KX641263_p74 | hypothetical protein | phrog_1173 | unknown function | unknown function | -1 | 45996 | 46163 |
| AOT24993.1 | KX641263_p72 | hypothetical protein | phrog_1562 | unknown function | unknown function | -1 | 44724 | 45137 |
| AOT24963.1 | KX641263_p41 | hypothetical protein | phrog_896 | unknown function | unknown function | -1 | 29934 | 30155 |
| AOT24987.1 | KX641263_p66 | DnaB-like helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 42228 | 43034 |
| AOT25001.1 | KX641263_p80 | hypothetical protein | phrog_1875 | unknown function | unknown function | -1 | 47282 | 47524 |
| AOT24944.1 | KX641263_p22 | hypothetical protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 16095 | 16430 |
| AOT25014.1 | KX641263_p93 | hypothetical protein | phrog_3207 | unknown function | unknown function | -1 | 50725 | 50991 |
| AOT24967.1 | KX641263_p45 | thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 32599 | 33330 |
| AOT24959.1 | KX641263_p37 | hypothetical protein | phrog_542 | unknown function | unknown function | -1 | 28853 | 29026 |
| AOT24931.1 | KX641263_p9 | hypothetical protein | phrog_1087 | unknown function | unknown function | 1 | 6346 | 6504 |
| AOT24969.1 | KX641263_p47 | ribonucleotide reductase | phrog_367 | ribonucleotide reductase | DNA, RNA and nucleotide metabolism | -1 | 33940 | 35973 |
| AOT24949.1 | KX641263_p27 | tape measure protein | phrog_305 | tail length tape measure protein | tail | 1 | 18405 | 20942 |
| AOT24978.1 | KX641263_p57 | hypothetical protein | phrog_1370 | unknown function | unknown function | -1 | 39387 | 39521 |
| AOT24925.1 | KX641263_p3 | hypothetical protein | phrog_4491 | unknown function | unknown function | 1 | 2258 | 2563 |
| AOT24965.1 | KX641263_p43 | hypothetical protein | phrog_517 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 31982 | 32395 |
| AOT24924.1 | KX641263_p2 | hypothetical protein | phrog_940 | nuclease | DNA, RNA and nucleotide metabolism | 1 | 643 | 1410 |
| AOT24938.1 | KX641263_p16 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 13392 | 13916 |
| AOT25003.1 | KX641263_p82 | hypothetical protein | phrog_1477 | unknown function | unknown function | -1 | 47751 | 47882 |
| AOT24927.1 | KX641263_p5 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 2894 | 3364 |
| AOT24954.1 | KX641263_p32 | minor tail protein | phrog_737 | minor tail protein | tail | 1 | 24570 | 26348 |
| AOT24943.1 | KX641263_p21 | hypothetical protein | phrog_320 | head closure Hc1 | connector | 1 | 15727 | 16095 |
| AOT24999.1 | KX641263_p78 | hypothetical protein | singleton | unknown function | unknown function | -1 | 46870 | 47019 |
| AOT24989.1 | KX641263_p68 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 43178 | 43417 |
| AOT24971.1 | KX641263_p49 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 36162 | 36341 |
| AOT24977.1 | KX641263_p55 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38466 | 39098 |
| AOT24953.1 | KX641263_p31 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 24261 | 24569 |
| AOT24982.1 | KX641263_p61 | hypothetical protein | phrog_13419 | unknown function | unknown function | -1 | 40929 | 41081 |
| AOT24958.1 | KX641263_p36 | hypothetical protein | phrog_13926 | unknown function | unknown function | -1 | 28645 | 28845 |
| AOT24994.1 | KX641263_p73 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 45198 | 45776 |
| AOT25005.1 | KX641263_p84 | hypothetical protein | phrog_421 | unknown function | unknown function | -1 | 48190 | 48951 |
| AOT24940.1 | KX641263_p18 | hypothetical protein | phrog_748 | head-tail connector protein | connector | 1 | 14973 | 15155 |
| AOT24945.1 | KX641263_p23 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 16439 | 16873 |
| AOT24961.1 | KX641263_p39 | hypothetical protein | phrog_2099 | unknown function | unknown function | -1 | 29414 | 29680 |
| AOT24939.1 | KX641263_p17 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 13947 | 14903 |
| AOT24986.1 | KX641263_p65 | hypothetical protein | phrog_1374 | unknown function | unknown function | -1 | 42019 | 42195 |
| AOT24955.1 | KX641263_p33 | integrase | phrog_1 | integrase | integration and excision | -1 | 26410 | 27525 |
| AOT24936.1 | KX641263_p14 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 10999 | 12459 |
| AOT24981.1 | KX641263_p60 | esterase/lipase | phrog_789 | esterase/lipase | other | -1 | 40096 | 40941 |
| AOT24991.1 | KX641263_p70 | hypothetical protein | phrog_642 | unknown function | unknown function | -1 | 43637 | 43855 |
| AOT24980.1 | KX641263_p59 | hypothetical protein | phrog_2187 | unknown function | unknown function | -1 | 39965 | 40096 |
| AOT24990.1 | KX641263_p69 | hypothetical protein | phrog_666 | unknown function | unknown function | -1 | 43446 | 43640 |
| AOT25012.1 | KX641263_p91 | hypothetical protein | phrog_1946 | unknown function | unknown function | -1 | 50229 | 50429 |
| AOT25000.1 | KX641263_p79 | hypothetical protein | phrog_3963 | unknown function | unknown function | -1 | 47016 | 47285 |
| AOT24976.1 | KX641263_p54 | hypothetical protein | phrog_2264 | unknown function | unknown function | -1 | 38380 | 38466 |
| AOT24983.1 | KX641263_p62 | hypothetical protein | phrog_1123 | unknown function | unknown function | -1 | 41081 | 41338 |
| AOT24942.1 | KX641263_p20 | hypothetical protein | phrog_830 | head-tail connector protein | connector | 1 | 15533 | 15727 |
| AOT24947.1 | KX641263_p26 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 17586 | 17990 |
| AOT24960.1 | KX641263_p38 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 29023 | 29427 |
| AOT24975.1 | KX641263_p53 | hypothetical protein | phrog_1167 | phosphofructokinase | other | -1 | 37931 | 38383 |
| AOT25011.1 | KX641263_p90 | hypothetical protein | phrog_519 | unknown function | unknown function | -1 | 50065 | 50232 |
| AOT25017.1 | KX641263_p96 | hypothetical protein | phrog_1676 | unknown function | unknown function | -1 | 51862 | 52161 |
| AOT24934.1 | KX641263_p12 | lysin B | phrog_102 | endolysin | lysis | 1 | 8215 | 9192 |
| AOT24966.1 | KX641263_p44 | hypothetical protein | phrog_690 | unknown function | unknown function | -1 | 32392 | 32595 |
| AOT24941.1 | KX641263_p19 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 15159 | 15536 |
| AOT24951.1 | KX641263_p29 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 21962 | 23758 |
| AOT24996.1 | KX641263_p75 | hypothetical protein | phrog_4294 | unknown function | unknown function | -1 | 46291 | 46449 |
| AOT24988.1 | KX641263_p67 | hypothetical protein | phrog_2731 | unknown function | unknown function | -1 | 43044 | 43181 |
| AOT24968.1 | KX641263_p46 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 33407 | 33928 |
| AOT25015.1 | KX641263_p94 | hypothetical protein | phrog_1392 | unknown function | unknown function | -1 | 51000 | 51710 |
| AOT24973.1 | KX641263_p51 | hypothetical protein | phrog_2436 | unknown function | unknown function | -1 | 37009 | 37161 |
| AOT24929.1 | KX641263_p7 | minor tail protein | phrog_819 | tail protein | tail | 1 | 4413 | 5363 |
| AOT25009.1 | KX641263_p88 | hypothetical protein | phrog_12268 | unknown function | unknown function | -1 | 49359 | 49691 |
| AOT25013.1 | KX641263_p92 | hypothetical protein | phrog_8476 | unknown function | unknown function | -1 | 50429 | 50725 |
| AOT24979.1 | KX641263_p58 | EndoVII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 39547 | 40011 |
| AOT25018.1 | KX641263_p56 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38926 | 39348 |
| AOT24928.1 | KX641263_p6 | minor tail protein | phrog_1260 | minor tail protein | tail | 1 | 3451 | 4413 |
| AOT24956.1 | KX641263_p34 | DNA binding domain protein | phrog_733 | excisionase | integration and excision | 1 | 27903 | 28334 |
| AOT24985.1 | KX641263_p64 | hypothetical protein | phrog_5101 | unknown function | unknown function | -1 | 41714 | 42022 |
| AOT24984.1 | KX641263_p63 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 41335 | 41568 |
| AOT24974.1 | KX641263_p52 | phosphoesterase | phrog_221 | metallo-phosphoesterase | other | -1 | 37164 | 37934 |
| AOT24998.1 | KX641263_p77 | hypothetical protein | phrog_8490 | unknown function | unknown function | -1 | 46727 | 46867 |
| AOT25002.1 | KX641263_p81 | hypothetical protein | phrog_3351 | unknown function | unknown function | -1 | 47521 | 47754 |
| AOT24926.1 | KX641263_p4 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2560 | 2856 |
| AOT24930.1 | KX641263_p8 | hypothetical protein | phrog_356 | minor tail protein | tail | 1 | 5367 | 6047 |
| AOT24997.1 | KX641263_p76 | hypothetical protein | phrog_4569 | unknown function | unknown function | -1 | 46449 | 46727 |
| AOT25006.1 | KX641263_p85 | hypothetical protein | phrog_855 | unknown function | unknown function | -1 | 48948 | 49082 |
| AOT24972.1 | KX641263_p50 | hypothetical protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 36338 | 37009 |
| AOT24962.1 | KX641263_p40 | hypothetical protein | phrog_3283 | unknown function | unknown function | -1 | 29704 | 29934 |
| AOT24932.1 | KX641263_p10 | lysin A | phrog_317 | endolysin | lysis | 1 | 6504 | 7799 |
| AOT25004.1 | KX641263_p83 | hypothetical protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 47882 | 48190 |
| AOT24948.1 | KX641263_p25 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 17586 | 18415 |
| AOT24957.1 | KX641263_p35 | HTH DNA binding domain protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | -1 | 28461 | 28631 |
| AOT25016.1 | KX641263_p95 | hypothetical protein | phrog_1445 | unknown function | unknown function | -1 | 51754 | 51831 |
| AOT24950.1 | KX641263_p28 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 20976 | 21989 |