Genomic map of Mycobacterium phage LindNT (KX641264)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX641264
Definition
Mycobacterium phage LindNT, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
DB of origin
NUCCORE
Length
60053
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
93
%GC
66.78
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AOT25063.1 KX641264_p45 HTH DNA binding protein phrog_2654 unknown function unknown function 1 36395 36562
AOT25066.1 KX641264_p48 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 37556 37819
AOT25108.1 KX641264_p90 hypothetical protein phrog_4560 unknown function unknown function 1 58597 58866
AOT25029.1 KX641264_p11 scaffolding protein phrog_1793 head scaffolding protein head and packaging 1 7280 7822
AOT25096.1 KX641264_p78 hypothetical protein phrog_3868 unknown function unknown function 1 52889 53365
AOT25039.1 KX641264_p21 minor tail protein phrog_106 minor tail protein tail 1 15985 17121
AOT25107.1 KX641264_p89 hypothetical protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover 1 58232 58447
AOT25041.1 KX641264_p23 minor tail protein phrog_1697 minor tail protein tail 1 18888 19364
AOT25076.1 KX641264_p58 hypothetical protein phrog_1498 unknown function unknown function 1 41322 41486
AOT25070.1 KX641264_p52 hypothetical protein phrog_3186 unknown function unknown function 1 39321 39701
AOT25043.1 KX641264_p25 minor tail protein phrog_1736 minor tail protein tail 1 20537 20845
AOT25069.1 KX641264_p51 hypothetical protein phrog_301 secreted protein other 1 38974 39324
AOT25054.1 KX641264_p36 hypothetical protein phrog_4112 unknown function unknown function 1 30152 30430
AOT25097.1 KX641264_p79 hypothetical protein phrog_20353 unknown function unknown function 1 53349 53522
AOT25072.1 KX641264_p54 hypothetical protein phrog_4832 unknown function unknown function 1 39977 40177
AOT25021.1 KX641264_p3 hypothetical protein phrog_2074 unknown function unknown function 1 452 706
AOT25064.1 KX641264_p46 hypothetical protein phrog_3903 unknown function unknown function 1 36556 36771
AOT25034.1 KX641264_p16 head-to-tail connector phrog_123 tail terminator connector 1 9943 10368
AOT25051.1 KX641264_p33 hypothetical protein phrog_1738 unknown function unknown function 1 28085 28336
AOT25091.1 KX641264_p73 hypothetical protein phrog_1338 unknown function unknown function 1 50578 50853
AOT25027.1 KX641264_p9 capsid maturation protease phrog_1752 head maturation protease head and packaging 1 4553 7063
AOT25061.1 KX641264_p43 HTH DNA binding domain protein phrog_1702 transcriptional repressor transcription regulation 1 35343 35582
AOT25019.1 KX641264_p1 hypothetical protein phrog_4624 unknown function unknown function 1 79 273
AOT25025.1 KX641264_p7 terminase phrog_2 terminase large subunit head and packaging 1 1562 2983
AOT25024.1 KX641264_p6 hypothetical protein phrog_1459 terminase small subunit head and packaging 1 1351 1578
AOT25102.1 KX641264_p84 hypothetical protein phrog_2822 unknown function unknown function 1 55622 56173
AOT25037.1 KX641264_p18 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 11196 12046
AOT25035.1 KX641264_p17 major tail protein phrog_117 major tail protein tail 1 10468 11082
AOT25074.1 KX641264_p56 hypothetical protein phrog_2596 unknown function unknown function 1 40742 41008
AOT25110.1 KX641264_p92 hypothetical protein phrog_5633 unknown function unknown function 1 59563 59697
AOT25111.1 KX641264_p93 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 59694 59996
AOT25058.1 KX641264_p40 integrase phrog_1 integrase integration and excision 1 32665 33753
AOT25022.1 KX641264_p4 hypothetical protein phrog_2293 unknown function unknown function 1 703 930
AOT25068.1 KX641264_p50 hypothetical protein phrog_542 unknown function unknown function 1 38772 38942
AOT25084.1 KX641264_p66 hypothetical protein phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 44352 44723
AOT25095.1 KX641264_p77 hypothetical protein phrog_2342 unknown function unknown function 1 51999 52892
AOT25094.1 KX641264_p76 hypothetical protein phrog_5776 unknown function unknown function 1 51871 52002
AOT25067.1 KX641264_p49 hypothetical protein phrog_2781 unknown function unknown function 1 37816 38760
AOT25082.1 KX641264_p64 hypothetical protein phrog_1911 unknown function unknown function 1 43499 44008
AOT25031.1 KX641264_p13 head-to-tail connector phrog_137 head-tail adaptor Ad1 connector 1 8945 9331
AOT25101.1 KX641264_p83 hypothetical protein phrog_3167 unknown function unknown function 1 55242 55622
AOT25046.1 KX641264_p28 hypothetical protein phrog_240 head protein head and packaging 1 24385 24756
AOT25093.1 KX641264_p75 hypothetical protein phrog_2974 unknown function unknown function 1 51505 51783
AOT25036.1 KX641264_p19 tail assembly chaperone phrog_1861 unknown function unknown function 1 11196 11636
AOT25050.1 KX641264_p32 hypothetical protein phrog_3413 unknown function unknown function 1 27747 28088
AOT25065.1 KX641264_p47 hypothetical protein phrog_2286 unknown function unknown function 1 36768 37559
AOT25109.1 KX641264_p91 hypothetical protein phrog_4561 unknown function unknown function 1 59288 59518
AOT25026.1 KX641264_p8 portal protein phrog_104 portal protein head and packaging 1 2980 4548
AOT25056.1 KX641264_p38 hypothetical protein phrog_1279 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover 1 31008 31940
AOT25042.1 KX641264_p24 minor tail protein phrog_1565 minor tail protein tail 1 19448 20530
AOT25057.1 KX641264_p39 hypothetical protein phrog_658 unknown function unknown function -1 32005 32283
AOT25080.1 KX641264_p62 hypothetical protein phrog_1581 unknown function unknown function 1 43082 43297
AOT25023.1 KX641264_p5 hypothetical protein phrog_2622 unknown function unknown function 1 1155 1358
AOT25020.1 KX641264_p2 hypothetical protein phrog_5284 unknown function unknown function 1 270 455
AOT25103.1 KX641264_p85 hypothetical protein phrog_2493 unknown function unknown function 1 56166 56735
AOT25106.1 KX641264_p88 hypothetical protein phrog_5243 unknown function unknown function 1 57914 58111
AOT25049.1 KX641264_p31 holin phrog_565 holin lysis 1 27310 27750
AOT25040.1 KX641264_p22 minor tail protein phrog_110 minor tail protein tail 1 17122 18888
AOT25085.1 KX641264_p67 DNA primase/polymerase phrog_2478 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 44765 47383
AOT25033.1 KX641264_p15 head-to-tail connector phrog_387 neck protein connector 1 9665 9946
AOT25098.1 KX641264_p80 hypothetical protein phrog_666 unknown function unknown function 1 53516 53713
AOT25088.1 KX641264_p70 hypothetical protein phrog_3478 unknown function unknown function 1 48778 49239
AOT25104.1 KX641264_p86 HTH DNA binding domain protein phrog_3665 unknown function unknown function 1 56732 56893
AOT25075.1 KX641264_p57 hypothetical protein phrog_2870 unknown function unknown function 1 41005 41325
AOT25059.1 KX641264_p41 hypothetical protein phrog_950 unknown function unknown function -1 33857 34750
AOT25078.1 KX641264_p60 hypothetical protein phrog_3492 unknown function unknown function 1 42358 42552
AOT25062.1 KX641264_p44 HTH DNA binding protein phrog_2908 unknown function unknown function 1 35871 36221
AOT25032.1 KX641264_p14 head-to-tail connector phrog_763 head-tail adaptor connector 1 9328 9684
AOT25030.1 KX641264_p12 major capsid protein phrog_10 major head protein head and packaging 1 7898 8833
AOT25099.1 KX641264_p81 hypothetical protein phrog_6426 unknown function unknown function 1 53710 53943
AOT25090.1 KX641264_p72 hypothetical protein phrog_4269 unknown function unknown function 1 50348 50581
AOT25081.1 KX641264_p63 hypothetical protein phrog_2388 unknown function unknown function 1 43297 43416
AOT25071.1 KX641264_p53 hypothetical protein phrog_1956 unknown function unknown function 1 39702 39980
AOT25105.1 KX641264_p87 hypothetical protein phrog_5812 unknown function unknown function 1 57064 57882
AOT25044.1 KX641264_p26 minor tail protein phrog_346 minor tail protein tail 1 20846 23278
AOT25100.1 KX641264_p82 RNA ligase phrog_1075 tRNA splicing ligase DNA, RNA and nucleotide metabolism 1 54058 55245
AOT25077.1 KX641264_p59 hypothetical protein phrog_1674 exonuclease DNA, RNA and nucleotide metabolism 1 41483 42361
AOT25087.1 KX641264_p69 hypothetical protein phrog_20209 unknown function unknown function 1 48480 48785
AOT25092.1 KX641264_p74 SprT phrog_1006 unknown function unknown function 1 50926 51387
AOT25028.1 KX641264_p10 hypothetical protein phrog_1757 unknown function unknown function 1 7060 7245
AOT25073.1 KX641264_p55 DnaQ-like protein phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 40200 40742
AOT25089.1 KX641264_p71 peptidase phrog_908 unknown function unknown function 1 49236 50336
AOT25086.1 KX641264_p68 RusA phrog_3055 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 47792 48487
AOT25060.1 KX641264_p42 hypothetical protein phrog_1746 transcriptional repressor transcription regulation -1 34787 35164
AOT25055.1 KX641264_p37 hypothetical protein phrog_7081 unknown function unknown function 1 30506 30904
AOT25045.1 KX641264_p27 minor tail protein phrog_416 minor tail protein tail 1 23290 24303
AOT25047.1 KX641264_p29 lysin A phrog_1519 endolysin lysis 1 24775 26430
AOT25079.1 KX641264_p61 hypothetical protein phrog_9435 unknown function unknown function 1 42606 43085
AOT25083.1 KX641264_p65 NrdH-like protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 44110 44352
AOT25048.1 KX641264_p30 lysin B phrog_102 endolysin lysis 1 26427 27299
AOT25052.1 KX641264_p34 exonuclease phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 28323 29531
AOT25038.1 KX641264_p20 tape measure protein phrog_971 endolysin lysis 1 12047 15883
AOT25053.1 KX641264_p35 hypothetical protein phrog_2311 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 29724 30155