| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX648391 |
Definition |
Mycobacterium phage Tortellini, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Tortellinivirus; Mycobacterium virus Tortellini. |
DB of origin |
NUCCORE |
Length |
49658 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
76 |
%GC |
65.81 |
Number of singletons |
11 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AOT25774.1 | KX648391_p29 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 26280 | 27407 |
| AOT25766.1 | KX648391_p21 | minor tail protein | phrog_2235 | minor tail protein | tail | 1 | 21612 | 21866 |
| AOT25776.1 | KX648391_p31 | hypothetical protein | singleton | unknown function | unknown function | -1 | 28969 | 29343 |
| AOT25810.1 | KX648391_p65 | hypothetical protein | phrog_2021 | unknown function | unknown function | 1 | 44207 | 44539 |
| AOT25798.1 | KX648391_p53 | hypothetical protein | phrog_4702 | unknown function | unknown function | 1 | 38794 | 38949 |
| AOT25814.1 | KX648391_p69 | hypothetical protein | phrog_2451 | unknown function | unknown function | 1 | 45507 | 45668 |
| AOT25786.1 | KX648391_p41 | helix-turn-helix DNA binding domain protein | singleton | unknown function | unknown function | 1 | 35256 | 35456 |
| AOT25802.1 | KX648391_p57 | DNA polymerase III sliding clamp beta | phrog_12598 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 40962 | 41663 |
| AOT25818.1 | KX648391_p73 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 48113 | 48484 |
| AOT25805.1 | KX648391_p60 | hypothetical protein | phrog_10863 | unknown function | unknown function | 1 | 42300 | 42824 |
| AOT25760.1 | KX648391_p14 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 9632 | 10544 |
| AOT25759.1 | KX648391_p15 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 9632 | 10267 |
| AOT25749.1 | KX648391_p4 | capsid maturation protease | phrog_2976 | head maturation protease | head and packaging | 1 | 3506 | 4849 |
| AOT25819.1 | KX648391_p74 | hypothetical protein | phrog_7285 | unknown function | unknown function | 1 | 48468 | 48719 |
| AOT25773.1 | KX648391_p28 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 25473 | 25922 |
| AOT25806.1 | KX648391_p61 | helix-turn-helix DNA binding domain protein | singleton | unknown function | unknown function | 1 | 42938 | 43144 |
| AOT25808.1 | KX648391_p63 | hypothetical protein | phrog_419 | unknown function | unknown function | 1 | 43457 | 43750 |
| AOT25817.1 | KX648391_p72 | hypothetical protein | phrog_6617 | unknown function | unknown function | 1 | 47805 | 48116 |
| AOT25780.1 | KX648391_p35 | hypothetical protein | singleton | unknown function | unknown function | -1 | 31571 | 32326 |
| AOT25815.1 | KX648391_p70 | hypothetical protein | phrog_3171 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 45649 | 46725 |
| AOT25812.1 | KX648391_p67 | HNH endonuclease | phrog_1571 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 45000 | 45356 |
| AOT25772.1 | KX648391_p27 | holin | phrog_526 | holin | lysis | 1 | 25084 | 25476 |
| AOT25800.1 | KX648391_p55 | exonuclease | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 39104 | 39952 |
| AOT25778.1 | KX648391_p33 | helix-turn-helix DNA binding domain protein | phrog_5316 | unknown function | unknown function | -1 | 30878 | 31096 |
| AOT25785.1 | KX648391_p40 | antirepressor | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 34462 | 35259 |
| AOT25754.1 | KX648391_p9 | head-to-tail connector complex protein | phrog_6553 | head closure Hc1 | connector | 1 | 6901 | 7251 |
| AOT25795.1 | KX648391_p50 | hypothetical protein | phrog_5806 | unknown function | unknown function | 1 | 38074 | 38208 |
| AOT25791.1 | KX648391_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36937 | 37128 |
| AOT25769.1 | KX648391_p24 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 23121 | 23483 |
| AOT25746.1 | KX648391_p1 | terminase small subunit | phrog_1496 | terminase small subunit | head and packaging | 1 | 43 | 432 |
| AOT25813.1 | KX648391_p68 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 45349 | 45510 |
| AOT25804.1 | KX648391_p59 | resolvase | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 41926 | 42303 |
| AOT25753.1 | KX648391_p8 | head-to-tail connector complex protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 6539 | 6901 |
| AOT25770.1 | KX648391_p25 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 23480 | 23647 |
| AOT25762.1 | KX648391_p17 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 14243 | 15988 |
| AOT25764.1 | KX648391_p19 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 17747 | 18640 |
| AOT25803.1 | KX648391_p58 | hypothetical protein | phrog_15611 | unknown function | unknown function | 1 | 41660 | 41929 |
| AOT25788.1 | KX648391_p43 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35919 | 36323 |
| AOT25793.1 | KX648391_p48 | hypothetical protein | phrog_11875 | unknown function | unknown function | 1 | 37529 | 37738 |
| AOT25751.1 | KX648391_p6 | major capsid protein | phrog_1650 | major head protein | head and packaging | 1 | 5252 | 6196 |
| AOT25771.1 | KX648391_p26 | lysin A | phrog_1519 | endolysin | lysis | 1 | 23717 | 25081 |
| AOT25756.1 | KX648391_p11 | hypothetical protein | phrog_2325 | minor tail protein | tail | 1 | 7594 | 7998 |
| AOT25797.1 | KX648391_p52 | recombination directionality factor | phrog_478 | site-specific recombination directionality factor RDF | integration and excision | 1 | 38411 | 38797 |
| AOT25784.1 | KX648391_p39 | hypothetical protein | singleton | unknown function | unknown function | -1 | 34075 | 34362 |
| AOT25807.1 | KX648391_p62 | hypothetical protein | phrog_5505 | unknown function | unknown function | 1 | 43141 | 43347 |
| AOT25799.1 | KX648391_p54 | hypothetical protein | phrog_10545 | unknown function | unknown function | 1 | 38946 | 39107 |
| AOT25801.1 | KX648391_p56 | hypothetical protein | phrog_3657 | unknown function | unknown function | 1 | 39946 | 40965 |
| AOT25763.1 | KX648391_p18 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 15988 | 17724 |
| AOT25816.1 | KX648391_p71 | helix-turn-helix DNA binding domain protein | phrog_908 | unknown function | unknown function | 1 | 46722 | 47627 |
| AOT25748.1 | KX648391_p3 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 2097 | 3515 |
| AOT25775.1 | KX648391_p30 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27404 | 28369 |
| AOT25782.1 | KX648391_p37 | immunity repressor | phrog_6288 | unknown function | unknown function | -1 | 32802 | 33401 |
| AOT25783.1 | KX648391_p38 | CRO protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 33573 | 33887 |
| AOT25750.1 | KX648391_p5 | scaffolding protein | phrog_673 | head scaffolding protein | head and packaging | 1 | 4852 | 5217 |
| AOT25787.1 | KX648391_p42 | hypothetical protein | phrog_3507 | unknown function | unknown function | 1 | 35456 | 35809 |
| AOT25761.1 | KX648391_p16 | tape measure protein | phrog_2337 | tail length tape measure protein | tail | 1 | 10557 | 14246 |
| AOT25767.1 | KX648391_p22 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 21866 | 22936 |
| AOT25752.1 | KX648391_p7 | hypothetical protein | phrog_2322 | head-tail connector protein | connector | 1 | 6196 | 6534 |
| AOT25765.1 | KX648391_p20 | minor tail protein | phrog_3493 | minor tail protein | tail | 1 | 18641 | 21592 |
| AOT25755.1 | KX648391_p10 | hypothetical protein | phrog_2322 | head-tail connector protein | connector | 1 | 7265 | 7594 |
| AOT25796.1 | KX648391_p51 | hypothetical protein | phrog_14059 | unknown function | unknown function | 1 | 38205 | 38414 |
| AOT25820.1 | KX648391_p75 | HNH endonuclease | phrog_1808 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 48723 | 49103 |
| AOT25757.1 | KX648391_p12 | head-to-tail connector complex protein | phrog_813 | head-tail adaptor | connector | 1 | 7995 | 8432 |
| AOT25794.1 | KX648391_p49 | WhiB family transcription factor | phrog_12112 | transcriptional regulator WhiB-like | transcription regulation | 1 | 37757 | 38077 |
| AOT25758.1 | KX648391_p13 | major tail protein | phrog_476 | major tail protein | tail | 1 | 8525 | 9523 |
| AOT25747.1 | KX648391_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 401 | 2080 |
| AOT25777.1 | KX648391_p32 | integrase | phrog_1 | integrase | integration and excision | -1 | 29682 | 30878 |
| AOT25809.1 | KX648391_p64 | hypothetical protein | phrog_722 | unknown function | unknown function | 1 | 43747 | 44214 |
| AOT25768.1 | KX648391_p23 | hypothetical protein | phrog_25391 | unknown function | unknown function | 1 | 22933 | 23109 |
| AOT25789.1 | KX648391_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36323 | 36472 |
| AOT25790.1 | KX648391_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36469 | 36876 |
| AOT25811.1 | KX648391_p66 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 44536 | 45000 |
| AOT25781.1 | KX648391_p36 | hypothetical protein | singleton | unknown function | unknown function | -1 | 32323 | 32805 |
| AOT25792.1 | KX648391_p47 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 37188 | 37532 |
| AOT25779.1 | KX648391_p34 | peptidase | phrog_87 | metallo-protease | other | -1 | 31084 | 31506 |
| AOT25821.1 | KX648391_p76 | polynucleotide kinase | phrog_2071 | ATPase | other | 1 | 49100 | 49549 |