Genomic map of Mycobacterium phage DarthPhader (KX657793)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX657793
Definition
Mycobacterium phage DarthPhader, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
53432
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
91
%GC
63.15
Number of singletons
3
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AOZ61291.1 KX657793_p50 hypothetical protein phrog_2436 unknown function unknown function -1 37443 37601
AOZ61325.1 KX657793_p84 hypothetical protein phrog_855 unknown function unknown function -1 49600 49743
AOZ61243.1 KX657793_p2 peptidase phrog_4415 peptidase other 1 1060 1938
AOZ61269.1 KX657793_p28 minor tail protein phrog_110 minor tail protein tail 1 21735 23507
AOZ61329.1 KX657793_p88 hypothetical protein phrog_1617 unknown function unknown function -1 50460 51344
AOZ61260.1 KX657793_p19 head-to-tail connector protein phrog_830 head-tail connector protein connector 1 14681 14887
AOZ61297.1 KX657793_p56 DNA primase singleton unknown function unknown function -1 39864 40094
AOZ61253.1 KX657793_p12 terminase phrog_9 terminase large subunit head and packaging 1 8323 10107
AOZ61312.1 KX657793_p71 hypothetical protein phrog_1562 unknown function unknown function -1 44870 45280
AOZ61245.1 KX657793_p4 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2246 2542
AOZ61257.1 KX657793_p16 major capsid protein phrog_10 major head protein head and packaging 1 13036 13998
AOZ61302.1 KX657793_p61 hypothetical protein phrog_8981 unknown function unknown function -1 41119 41346
AOZ61262.1 KX657793_p21 head-to-tail connector protein phrog_321 tail completion or Neck1 protein connector 1 15252 15638
AOZ61255.1 KX657793_p14 capsid maturation protease phrog_193 head maturation protease head and packaging 1 11570 12427
AOZ61274.1 KX657793_p33 hypothetical protein phrog_19086 unknown function unknown function 1 26410 26613
AOZ61285.1 KX657793_p44 hypothetical protein phrog_690 unknown function unknown function -1 32947 33153
AOZ61304.1 KX657793_p63 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision -1 41685 42068
AOZ61315.1 KX657793_p74 hypothetical protein phrog_5531 unknown function unknown function -1 46216 46437
AOZ61275.1 KX657793_p34 helix-turn-helix DNA binding domain protein phrog_1746 transcriptional repressor transcription regulation -1 26617 26868
AOZ61242.1 KX657793_p1 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 437 1234
AOZ61244.1 KX657793_p3 hypothetical protein phrog_4347 unknown function unknown function 1 1938 2249
AOZ61323.1 KX657793_p82 hypothetical protein phrog_1946 unknown function unknown function -1 48626 48841
AOZ61290.1 KX657793_p49 DNA binding protein phrog_354 sigma-K factor transcription regulation -1 36769 37443
AOZ61250.1 KX657793_p9 hypothetical protein phrog_1087 unknown function unknown function 1 6401 6529
AOZ61247.1 KX657793_p6 minor tail protein phrog_1260 minor tail protein tail 1 3147 4508
AOZ61261.1 KX657793_p20 head-to-tail connector protein phrog_320 head closure Hc1 connector 1 14884 15252
AOZ61254.1 KX657793_p13 portal protein phrog_104 portal protein head and packaging 1 10104 11573
AOZ61307.1 KX657793_p66 hypothetical protein phrog_2660 unknown function unknown function -1 43082 43330
AOZ61251.1 KX657793_p10 lysin A phrog_317 endolysin lysis 1 6529 7929
AOZ61278.1 KX657793_p37 hypothetical protein phrog_549 unknown function unknown function 1 29146 29526
AOZ61310.1 KX657793_p69 hypothetical protein phrog_642 unknown function unknown function -1 43786 44013
AOZ61314.1 KX657793_p73 hypothetical protein phrog_1173 unknown function unknown function -1 46040 46216
AOZ61267.1 KX657793_p26 tape measure protein phrog_305 tail length tape measure protein tail 1 17575 20688
AOZ61279.1 KX657793_p38 hypothetical protein phrog_383 unknown function unknown function -1 29602 30021
AOZ61273.1 KX657793_p32 hypothetical protein phrog_2570 unknown function unknown function 1 26222 26431
AOZ61301.1 KX657793_p60 hypothetical protein phrog_1498 unknown function unknown function -1 40982 41122
AOZ61322.1 KX657793_p81 hypothetical protein phrog_519 unknown function unknown function -1 48462 48629
AOZ61286.1 KX657793_p45 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 33155 33859
AOZ61295.1 KX657793_p54 hypothetical protein phrog_18377 unknown function unknown function -1 39180 39404
AOZ61246.1 KX657793_p5 minor tail protein phrog_226 minor tail protein tail 1 2582 3058
AOZ61266.1 KX657793_p24 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 16774 17597
AOZ61292.1 KX657793_p51 metallophosphoesterase phrog_221 metallo-phosphoesterase other -1 37605 38372
AOZ61283.1 KX657793_p42 hypothetical protein phrog_2094 unknown function unknown function -1 32275 32610
AOZ61311.1 KX657793_p70 exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 44058 44873
AOZ61276.1 KX657793_p35 integrase phrog_95 integrase integration and excision -1 26865 28430
AOZ61305.1 KX657793_p64 hypothetical protein phrog_1374 unknown function unknown function -1 42065 42262
AOZ61309.1 KX657793_p68 hypothetical protein singleton unknown function unknown function -1 43667 43789
AOZ61332.1 KX657793_p91 hypothetical protein phrog_1676 unknown function unknown function -1 51671 52006
AOZ61277.1 KX657793_p36 hypothetical protein phrog_733 excisionase integration and excision 1 28677 29096
AOZ61298.1 KX657793_p57 hypothetical protein phrog_4886 unknown function unknown function -1 40243 40398
AOZ61272.1 KX657793_p31 minor tail protein phrog_346 minor tail protein tail 1 24371 26161
AOZ61282.1 KX657793_p41 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 30422 32266
AOZ61319.1 KX657793_p78 DNA methylase phrog_1008 DNA methyltransferase other -1 47048 47620
AOZ61248.1 KX657793_p7 hypothetical protein phrog_819 tail protein tail 1 4505 5314
AOZ61281.1 KX657793_p40 hypothetical protein phrog_896 unknown function unknown function -1 30166 30405
AOZ61318.1 KX657793_p77 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 46699 46974
AOZ61316.1 KX657793_p75 hypothetical protein phrog_1477 unknown function unknown function -1 46434 46568
AOZ61313.1 KX657793_p72 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 45297 45812
AOZ61256.1 KX657793_p15 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 12456 12989
AOZ61265.1 KX657793_p25 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 16774 17169
AOZ61270.1 KX657793_p29 minor tail protein phrog_352 minor tail protein tail 1 23567 24016
AOZ61321.1 KX657793_p80 hypothetical protein phrog_586 unknown function unknown function -1 48082 48465
AOZ61271.1 KX657793_p30 minor tail protein phrog_404 minor tail protein tail 1 24013 24369
AOZ61303.1 KX657793_p62 hypothetical protein phrog_397 unknown function unknown function -1 41408 41641
AOZ61288.1 KX657793_p47 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 34509 36548
AOZ61249.1 KX657793_p8 hypothetical protein phrog_754 minor tail protein tail 1 5319 6242
AOZ61258.1 KX657793_p17 head-to-tail connector protein phrog_3101 unknown function unknown function 1 14100 14303
AOZ61268.1 KX657793_p27 minor tail protein phrog_106 minor tail protein tail 1 20722 21738
AOZ61287.1 KX657793_p46 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 33961 34512
AOZ61308.1 KX657793_p67 hypothetical protein phrog_520 unknown function unknown function -1 43356 43667
AOZ61320.1 KX657793_p79 DNA methylase phrog_363 DNA methyltransferase other -1 47520 48059
AOZ61293.1 KX657793_p52 hypothetical protein phrog_1167 phosphofructokinase other -1 38369 38914
AOZ61317.1 KX657793_p76 hypothetical protein singleton unknown function unknown function -1 46568 46699
AOZ61296.1 KX657793_p55 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 39404 40030
AOZ61328.1 KX657793_p87 hypothetical protein phrog_1946 unknown function unknown function -1 50218 50463
AOZ61284.1 KX657793_p43 HNH endonuclease phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 32610 32954
AOZ61263.1 KX657793_p22 head-to-tail connector protein phrog_123 tail terminator connector 1 15635 16042
AOZ61324.1 KX657793_p83 hypothetical protein phrog_421 unknown function unknown function -1 48851 49603
AOZ61252.1 KX657793_p11 holin phrog_526 holin lysis 1 7926 8303
AOZ61326.1 KX657793_p85 hypothetical protein phrog_3718 unknown function unknown function -1 49740 50000
AOZ61264.1 KX657793_p23 major tail protein phrog_117 major tail protein tail 1 16058 16654
AOZ61280.1 KX657793_p39 hypothetical protein phrog_7968 unknown function unknown function -1 30014 30166
AOZ61330.1 KX657793_p89 hypothetical protein phrog_2499 unknown function unknown function -1 51353 51559
AOZ61306.1 KX657793_p65 dsDNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 42275 43021
AOZ61300.1 KX657793_p59 hypothetical protein phrog_9791 unknown function unknown function -1 40830 40985
AOZ61331.1 KX657793_p90 hypothetical protein phrog_1445 unknown function unknown function -1 51556 51639
AOZ61294.1 KX657793_p53 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 38911 39183
AOZ61327.1 KX657793_p86 hypothetical protein phrog_1178 unknown function unknown function -1 50003 50218
AOZ61299.1 KX657793_p58 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 40415 40882
AOZ61259.1 KX657793_p18 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 14307 14684
AOZ61289.1 KX657793_p48 hypothetical protein phrog_499 unknown function unknown function -1 36545 36772