| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX657794 |
Definition |
Mycobacterium phage SamuelLPlaqson, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus. |
DB of origin |
NUCCORE |
Length |
60526 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
97 |
%GC |
66.22 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AOZ61426.1 | KX657794_p94 | hypothetical protein | phrog_6135 | unknown function | unknown function | 1 | 59115 | 59381 |
| AOZ61399.1 | KX657794_p67 | HNH endonuclease | phrog_1571 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44604 | 44975 |
| AOZ61345.1 | KX657794_p13 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 8929 | 9309 |
| AOZ61355.1 | KX657794_p23 | minor tail protein | phrog_1697 | minor tail protein | tail | 1 | 18868 | 19344 |
| AOZ61381.1 | KX657794_p49 | helix-turn-helix DNA binding domain protein | phrog_2286 | unknown function | unknown function | 1 | 37454 | 38245 |
| AOZ61383.1 | KX657794_p51 | hypothetical protein | phrog_2781 | unknown function | unknown function | 1 | 38502 | 39452 |
| AOZ61395.1 | KX657794_p63 | hypothetical protein | phrog_1581 | unknown function | unknown function | 1 | 43328 | 43543 |
| AOZ61336.1 | KX657794_p4 | hypothetical protein | phrog_2293 | unknown function | unknown function | 1 | 691 | 903 |
| AOZ61343.1 | KX657794_p11 | scaffolding protein | phrog_1793 | head scaffolding protein | head and packaging | 1 | 7263 | 7805 |
| AOZ61334.1 | KX657794_p2 | hypothetical protein | phrog_5284 | unknown function | unknown function | 1 | 258 | 443 |
| AOZ61388.1 | KX657794_p56 | hypothetical protein | phrog_4832 | unknown function | unknown function | 1 | 40671 | 40874 |
| AOZ61377.1 | KX657794_p45 | excise | phrog_1840 | excisionase | integration and excision | 1 | 36292 | 36558 |
| AOZ61356.1 | KX657794_p24 | minor tail protein | phrog_1565 | minor tail protein | tail | 1 | 19428 | 20510 |
| AOZ61358.1 | KX657794_p26 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 20840 | 23272 |
| AOZ61408.1 | KX657794_p76 | hypothetical protein | phrog_12426 | unknown function | unknown function | 1 | 51440 | 51670 |
| AOZ61427.1 | KX657794_p95 | hypothetical protein | phrog_4561 | unknown function | unknown function | 1 | 59765 | 59995 |
| AOZ61385.1 | KX657794_p53 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 39665 | 40015 |
| AOZ61333.1 | KX657794_p1 | hypothetical protein | phrog_4624 | unknown function | unknown function | 1 | 61 | 261 |
| AOZ61348.1 | KX657794_p16 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 9921 | 10346 |
| AOZ61417.1 | KX657794_p85 | hypothetical protein | phrog_3167 | unknown function | unknown function | 1 | 55402 | 55782 |
| AOZ61394.1 | KX657794_p62 | hypothetical protein | phrog_3492 | unknown function | unknown function | 1 | 43052 | 43252 |
| AOZ61409.1 | KX657794_p77 | hypothetical protein | phrog_5776 | unknown function | unknown function | 1 | 51667 | 51801 |
| AOZ61341.1 | KX657794_p9 | capsid maturation protease | phrog_1752 | head maturation protease | head and packaging | 1 | 4551 | 7046 |
| AOZ61354.1 | KX657794_p22 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 17102 | 18868 |
| AOZ61363.1 | KX657794_p31 | holin | phrog_565 | holin | lysis | 1 | 27266 | 27706 |
| AOZ61396.1 | KX657794_p64 | hypothetical protein | phrog_2388 | unknown function | unknown function | 1 | 43543 | 43662 |
| AOZ61378.1 | KX657794_p46 | hypothetical protein | phrog_2908 | unknown function | unknown function | 1 | 36560 | 36904 |
| AOZ61371.1 | KX657794_p39 | queuine tRNA-ribosyltransferase | phrog_1279 | queuine tRNA-ribosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 31795 | 32652 |
| AOZ61346.1 | KX657794_p14 | head-to-tail connector protein | phrog_763 | head-tail adaptor | connector | 1 | 9306 | 9662 |
| AOZ61368.1 | KX657794_p36 | hypothetical protein | phrog_4112 | unknown function | unknown function | 1 | 30131 | 30535 |
| AOZ61342.1 | KX657794_p10 | hypothetical protein | phrog_1757 | unknown function | unknown function | 1 | 7043 | 7228 |
| AOZ61418.1 | KX657794_p86 | hypothetical protein | phrog_2822 | unknown function | unknown function | 1 | 55782 | 56321 |
| AOZ61423.1 | KX657794_p91 | hypothetical protein | phrog_5243 | unknown function | unknown function | 1 | 58057 | 58257 |
| AOZ61411.1 | KX657794_p79 | helix-turn-helix DNA binding domain protein | phrog_2342 | unknown function | unknown function | 1 | 52038 | 52931 |
| AOZ61359.1 | KX657794_p27 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 23284 | 24297 |
| AOZ61419.1 | KX657794_p87 | hypothetical protein | phrog_2493 | unknown function | unknown function | 1 | 56314 | 56883 |
| AOZ61339.1 | KX657794_p7 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 1566 | 2987 |
| AOZ61380.1 | KX657794_p48 | hypothetical protein | phrog_3903 | unknown function | unknown function | 1 | 37245 | 37457 |
| AOZ61364.1 | KX657794_p32 | hypothetical protein | phrog_3413 | unknown function | unknown function | 1 | 27706 | 28068 |
| AOZ61425.1 | KX657794_p93 | hypothetical protein | phrog_4560 | unknown function | unknown function | 1 | 58746 | 58994 |
| AOZ61347.1 | KX657794_p15 | head-to-tail connector protein | phrog_387 | neck protein | connector | 1 | 9643 | 9924 |
| AOZ61412.1 | KX657794_p80 | hypothetical protein | phrog_3868 | unknown function | unknown function | 1 | 52928 | 53401 |
| AOZ61362.1 | KX657794_p30 | lysin B | phrog_102 | endolysin | lysis | 1 | 26382 | 27254 |
| AOZ61384.1 | KX657794_p52 | hypothetical protein | phrog_542 | unknown function | unknown function | 1 | 39464 | 39634 |
| AOZ61372.1 | KX657794_p40 | hypothetical protein | phrog_658 | unknown function | unknown function | -1 | 32717 | 33019 |
| AOZ61404.1 | KX657794_p72 | helix-turn-helix DNA binding domain protein | phrog_908 | unknown function | unknown function | 1 | 49181 | 50269 |
| AOZ61379.1 | KX657794_p47 | hypothetical protein | phrog_2654 | unknown function | unknown function | 1 | 37081 | 37248 |
| AOZ61410.1 | KX657794_p78 | hypothetical protein | phrog_7536 | unknown function | unknown function | 1 | 51868 | 52041 |
| AOZ61415.1 | KX657794_p83 | hypothetical protein | phrog_6426 | unknown function | unknown function | 1 | 53948 | 54100 |
| AOZ61421.1 | KX657794_p89 | hypothetical protein | singleton | unknown function | unknown function | 1 | 57069 | 57206 |
| AOZ61402.1 | KX657794_p70 | resolvase | phrog_3055 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 48032 | 48730 |
| AOZ61422.1 | KX657794_p90 | hypothetical protein | phrog_5812 | unknown function | unknown function | 1 | 57215 | 58027 |
| AOZ61366.1 | KX657794_p34 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 28303 | 29511 |
| AOZ61429.1 | KX657794_p97 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 60168 | 60470 |
| AOZ61351.1 | KX657794_p18 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 11173 | 12023 |
| AOZ61337.1 | KX657794_p5 | hypothetical protein | phrog_2622 | unknown function | unknown function | 1 | 1162 | 1362 |
| AOZ61338.1 | KX657794_p6 | terminase small subunit | phrog_1459 | terminase small subunit | head and packaging | 1 | 1355 | 1582 |
| AOZ61365.1 | KX657794_p33 | hypothetical protein | phrog_1738 | unknown function | unknown function | 1 | 28065 | 28316 |
| AOZ61398.1 | KX657794_p66 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 44362 | 44604 |
| AOZ61352.1 | KX657794_p20 | tape measure protein | phrog_971 | endolysin | lysis | 1 | 12024 | 15863 |
| AOZ61375.1 | KX657794_p43 | immunity repressor | phrog_1746 | transcriptional repressor | transcription regulation | -1 | 35500 | 35877 |
| AOZ61400.1 | KX657794_p68 | DNA primase | phrog_2478 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 45017 | 47635 |
| AOZ61407.1 | KX657794_p75 | protease | phrog_1006 | unknown function | unknown function | 1 | 50854 | 51315 |
| AOZ61369.1 | KX657794_p37 | hypothetical protein | phrog_2433 | unknown function | unknown function | 1 | 30614 | 31297 |
| AOZ61335.1 | KX657794_p3 | hypothetical protein | phrog_2074 | unknown function | unknown function | 1 | 440 | 694 |
| AOZ61397.1 | KX657794_p65 | hypothetical protein | phrog_1911 | unknown function | unknown function | 1 | 43745 | 44260 |
| AOZ61420.1 | KX657794_p88 | hypothetical protein | phrog_3665 | unknown function | unknown function | 1 | 56880 | 57047 |
| AOZ61360.1 | KX657794_p28 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 24379 | 24750 |
| AOZ61428.1 | KX657794_p96 | hypothetical protein | phrog_5633 | unknown function | unknown function | 1 | 59992 | 60171 |
| AOZ61406.1 | KX657794_p74 | hypothetical protein | phrog_1338 | unknown function | unknown function | 1 | 50512 | 50781 |
| AOZ61357.1 | KX657794_p25 | hypothetical protein | phrog_1736 | minor tail protein | tail | 1 | 20559 | 20837 |
| AOZ61386.1 | KX657794_p54 | hypothetical protein | phrog_3186 | unknown function | unknown function | 1 | 40012 | 40377 |
| AOZ61376.1 | KX657794_p44 | Cro protein | phrog_1702 | transcriptional repressor | transcription regulation | 1 | 36056 | 36295 |
| AOZ61349.1 | KX657794_p17 | major tail protein | phrog_117 | major tail protein | tail | 1 | 10446 | 11060 |
| AOZ61374.1 | KX657794_p42 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 34568 | 35473 |
| AOZ61390.1 | KX657794_p58 | hypothetical protein | phrog_2596 | unknown function | unknown function | 1 | 41439 | 41705 |
| AOZ61401.1 | KX657794_p69 | hypothetical protein | phrog_7662 | unknown function | unknown function | 1 | 47635 | 47979 |
| AOZ61424.1 | KX657794_p92 | hypothetical protein | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 58379 | 58594 |
| AOZ61389.1 | KX657794_p57 | DNA polymerase III subunit | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 40885 | 41439 |
| AOZ61414.1 | KX657794_p82 | hypothetical protein | phrog_666 | unknown function | unknown function | 1 | 53754 | 53951 |
| AOZ61367.1 | KX657794_p35 | hypothetical protein | phrog_2311 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 29703 | 30134 |
| AOZ61403.1 | KX657794_p71 | hypothetical protein | phrog_3478 | unknown function | unknown function | 1 | 48723 | 49184 |
| AOZ61373.1 | KX657794_p41 | integrase | phrog_1 | integrase | integration and excision | 1 | 33376 | 34464 |
| AOZ61382.1 | KX657794_p50 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 38242 | 38505 |
| AOZ61391.1 | KX657794_p59 | hypothetical protein | phrog_2870 | unknown function | unknown function | 1 | 41702 | 42022 |
| AOZ61387.1 | KX657794_p55 | hypothetical protein | phrog_1956 | unknown function | unknown function | 1 | 40396 | 40674 |
| AOZ61393.1 | KX657794_p61 | exonuclease | phrog_1674 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 42174 | 43055 |
| AOZ61416.1 | KX657794_p84 | RNA ligase | phrog_1075 | tRNA splicing ligase | DNA, RNA and nucleotide metabolism | 1 | 54212 | 55402 |
| AOZ61370.1 | KX657794_p38 | hypothetical protein | phrog_37936 | unknown function | unknown function | 1 | 31412 | 31690 |
| AOZ61350.1 | KX657794_p19 | tail assembly chaperone | phrog_1861 | unknown function | unknown function | 1 | 11173 | 11613 |
| AOZ61344.1 | KX657794_p12 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 7882 | 8817 |
| AOZ61353.1 | KX657794_p21 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 15965 | 17101 |
| AOZ61392.1 | KX657794_p60 | hypothetical protein | phrog_1498 | unknown function | unknown function | 1 | 42019 | 42177 |
| AOZ61405.1 | KX657794_p73 | hypothetical protein | phrog_4269 | unknown function | unknown function | 1 | 50282 | 50515 |
| AOZ61340.1 | KX657794_p8 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2999 | 4546 |
| AOZ61413.1 | KX657794_p81 | hypothetical protein | phrog_5135 | unknown function | unknown function | 1 | 53398 | 53760 |
| AOZ61361.1 | KX657794_p29 | lysin A | phrog_1519 | endolysin | lysis | 1 | 24769 | 26385 |