Genomic map of Mycobacterium phage Phaeder (KX664447)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX664447
Definition
Mycobacterium phage Phaeder, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
53300
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
99
%GC
62.61
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AOY12100.1 KX664447_p16 major capsid protein phrog_10 major head protein head and packaging 1 12848 13807
AOY12073.1 KX664447_p20 hypothetical protein phrog_320 head closure Hc1 connector 1 14708 15076
AOY12070.1 KX664447_p34 hypothetical protein phrog_13533 unknown function unknown function 1 26524 26946
AOY12008.1 KX664447_p87 hypothetical protein phrog_421 unknown function unknown function -1 47922 48683
AOY12027.1 KX664447_p74 exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 42829 43671
AOY12093.1 KX664447_p9 hypothetical protein phrog_1087 unknown function unknown function 1 6006 6146
AOY12012.1 KX664447_p91 hypothetical protein phrog_10931 unknown function unknown function -1 49459 49593
AOY12078.1 KX664447_p24 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 16614 17461
AOY12009.1 KX664447_p88 hypothetical protein phrog_855 unknown function unknown function -1 48686 48820
AOY12088.1 KX664447_p3 hypothetical protein phrog_10336 unknown function unknown function 1 2111 2338
AOY12042.1 KX664447_p56 hypothetical protein phrog_474 phosphofructokinase other -1 37678 37956
AOY12059.1 KX664447_p40 hypothetical protein phrog_9466 unknown function unknown function -1 28692 28895
AOY12031.1 KX664447_p78 hypothetical protein phrog_7865 unknown function unknown function -1 45087 45257
AOY12075.1 KX664447_p22 hypothetical protein phrog_123 tail terminator connector 1 15462 15884
AOY12080.1 KX664447_p27 minor tail protein phrog_106 minor tail protein tail 1 20527 21540
AOY12069.1 KX664447_p50 ribonucleoside reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 33631 35670
AOY12086.1 KX664447_p33 hypothetical protein phrog_2570 unknown function unknown function 1 26209 26403
AOY12013.1 KX664447_p92 hypothetical protein phrog_519 unknown function unknown function -1 49590 49763
AOY12036.1 KX664447_p83 hypothetical protein phrog_1008 DNA methyltransferase other -1 46258 46773
AOY12049.1 KX664447_p64 hypothetical protein phrog_18212 unknown function unknown function -1 40009 40146
AOY12094.1 KX664447_p10 lysin A phrog_317 endolysin lysis 1 6146 7726
AOY12089.1 KX664447_p5 hypothetical protein phrog_226 minor tail protein tail 1 2669 3142
AOY12037.1 KX664447_p51 hypothetical protein phrog_2046 unknown function unknown function -1 35670 35873
AOY12055.1 KX664447_p36 ParB phrog_2639 Arc-like repressor transcription regulation 1 27587 27856
AOY12081.1 KX664447_p28 hypothetical protein phrog_1543 minor tail protein tail 1 21537 21749
AOY12096.1 KX664447_p12 terminase phrog_9 terminase large subunit head and packaging 1 8124 9896
AOY12020.1 KX664447_p99 hypothetical protein phrog_1676 unknown function unknown function -1 51527 51823
AOY12102.1 KX664447_p1 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 379 1161
AOY12071.1 KX664447_p18 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 14140 14517
AOY12030.1 KX664447_p77 hypothetical protein phrog_1173 unknown function unknown function -1 44892 45056
AOY12082.1 KX664447_p29 minor tail protein phrog_110 minor tail protein tail 1 21746 23539
AOY12011.1 KX664447_p90 hypothetical protein phrog_586 unknown function unknown function -1 49095 49448
AOY12063.1 KX664447_p44 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 29690 31483
AOY12025.1 KX664447_p72 hypothetical protein phrog_520 unknown function unknown function -1 42290 42568
AOY12005.1 KX664447_p84 DNA methylase phrog_363 DNA methyltransferase other -1 46724 47272
AOY12044.1 KX664447_p58 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38225 38854
AOY12038.1 KX664447_p52 hypothetical protein phrog_499 unknown function unknown function -1 35845 36108
AOY12024.1 KX664447_p71 hypothetical protein phrog_9978 unknown function unknown function -1 42129 42293
AOY12034.1 KX664447_p81 hypothetical protein phrog_8086 unknown function unknown function -1 45778 46014
AOY12041.1 KX664447_p55 phosphoesterase phrog_221 metallo-phosphoesterase other -1 36911 37681
AOY12051.1 KX664447_p66 hypothetical protein phrog_8981 unknown function unknown function -1 40280 40456
AOY12006.1 KX664447_p85 hypothetical protein phrog_3256 unknown function unknown function -1 47276 47641
AOY12103.1 KX664447_p4 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2335 2628
AOY12048.1 KX664447_p63 hypothetical protein phrog_9791 unknown function unknown function -1 39857 40012
AOY12061.1 KX664447_p42 hypothetical protein phrog_7968 unknown function unknown function -1 29256 29420
AOY12064.1 KX664447_p45 hypothetical protein phrog_4326 unknown function unknown function -1 31487 31783
AOY12007.1 KX664447_p86 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 47641 47907
AOY12052.1 KX664447_p67 hypothetical protein phrog_397 unknown function unknown function -1 40453 40602
AOY12099.1 KX664447_p15 scaffold protein phrog_233 head scaffolding protein head and packaging 1 12267 12800
AOY12101.1 KX664447_p17 hypothetical protein phrog_3101 unknown function unknown function 1 13913 14137
AOY12074.1 KX664447_p21 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 15076 15465
AOY12090.1 KX664447_p6 hypothetical protein phrog_1260 minor tail protein tail 1 3230 4192
AOY12040.1 KX664447_p54 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 36242 36907
AOY12016.1 KX664447_p95 hypothetical protein phrog_2124 unknown function unknown function -1 50354 50482
AOY12035.1 KX664447_p82 hypothetical protein phrog_1342 unknown function unknown function -1 46011 46238
AOY12072.1 KX664447_p19 hypothetical protein phrog_830 head-tail connector protein connector 1 14514 14711
AOY12021.1 KX664447_p68 hypothetical protein phrog_542 unknown function unknown function -1 40769 40924
AOY12039.1 KX664447_p53 hypothetical protein phrog_10515 unknown function unknown function -1 36105 36245
AOY12068.1 KX664447_p49 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 33104 33619
AOY12079.1 KX664447_p26 tape measure protein phrog_305 tail length tape measure protein tail 1 17590 20499
AOY12032.1 KX664447_p79 hypothetical protein phrog_5531 unknown function unknown function -1 45267 45485
AOY12066.1 KX664447_p47 hypothetical protein phrog_690 unknown function unknown function -1 32106 32318
AOY12017.1 KX664447_p96 hypothetical protein phrog_1392 unknown function unknown function -1 50491 51201
AOY12057.1 KX664447_p38 hypothetical protein phrog_10331 DNA binding protein DNA, RNA and nucleotide metabolism -1 28197 28511
AOY12076.1 KX664447_p23 major tail protein phrog_117 major tail protein tail 1 15900 16496
AOY12087.1 KX664447_p2 hypothetical protein phrog_5234 unknown function unknown function 1 1050 2114
AOY12058.1 KX664447_p39 hypothetical protein phrog_10689 unknown function unknown function -1 28492 28695
AOY12046.1 KX664447_p61 hypothetical protein phrog_4886 unknown function unknown function -1 39272 39451
AOY12014.1 KX664447_p93 hypothetical protein phrog_10771 unknown function unknown function -1 49760 50131
AOY12015.1 KX664447_p94 hypothetical protein phrog_3831 unknown function unknown function -1 50134 50364
AOY12062.1 KX664447_p43 hypothetical protein phrog_896 unknown function unknown function -1 29420 29659
AOY12083.1 KX664447_p30 hypothetical protein phrog_352 minor tail protein tail 1 23557 24006
AOY12028.1 KX664447_p75 hypothetical protein phrog_1562 unknown function unknown function -1 43668 44087
AOY12085.1 KX664447_p32 minor tail protein phrog_737 minor tail protein tail 1 24377 26143
AOY12033.1 KX664447_p80 hypothetical protein phrog_3963 unknown function unknown function -1 45488 45778
AOY12060.1 KX664447_p41 hypothetical protein phrog_383 unknown function unknown function -1 28892 29263
AOY12095.1 KX664447_p11 holin phrog_526 holin lysis 1 7723 8109
AOY12010.1 KX664447_p89 hypothetical protein phrog_3718 unknown function unknown function -1 48826 49071
AOY12065.1 KX664447_p46 hypothetical protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 31783 32109
AOY12026.1 KX664447_p73 hypothetical protein phrog_642 unknown function unknown function -1 42580 42798
AOY12097.1 KX664447_p13 portal protein phrog_104 portal protein head and packaging 1 9893 11380
AOY12054.1 KX664447_p35 ParA phrog_164 ParA-like partition protein DNA, RNA and nucleotide metabolism 1 27013 27594
AOY12098.1 KX664447_p14 capsid maturation protease phrog_193 head maturation protease head and packaging 1 11377 12237
AOY12023.1 KX664447_p70 DNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 41319 42128
AOY12053.1 KX664447_p59 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38688 39071
AOY12043.1 KX664447_p57 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 37953 38225
AOY12047.1 KX664447_p62 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39448 39912
AOY12045.1 KX664447_p60 hypothetical protein phrog_10806 unknown function unknown function -1 39061 39279
AOY12019.1 KX664447_p98 hypothetical protein phrog_1445 unknown function unknown function -1 51413 51496
AOY12029.1 KX664447_p76 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 44108 44644
AOY12091.1 KX664447_p7 hypothetical protein phrog_819 tail protein tail 1 4192 5235
AOY12077.1 KX664447_p25 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 16614 17009
AOY12018.1 KX664447_p97 hypothetical protein phrog_2499 unknown function unknown function -1 51203 51397
AOY12084.1 KX664447_p31 hypothetical protein phrog_404 minor tail protein tail 1 24008 24376
AOY12067.1 KX664447_p48 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 32320 33024
AOY12022.1 KX664447_p69 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision -1 40921 41307
AOY12092.1 KX664447_p8 hypothetical protein phrog_356 minor tail protein tail 1 5239 5868
AOY12056.1 KX664447_p37 hypothetical protein phrog_2697 unknown function unknown function -1 28000 28200
AOY12050.1 KX664447_p65 hypothetical protein phrog_1498 unknown function unknown function -1 40146 40295