Genomic map of Mycobacterium phage TBond007 (KX683428)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX683428
Definition
Mycobacterium phage TBond007, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
DB of origin
NUCCORE
Length
61145
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
97
%GC
67.32
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AOT23746.1 KX683428_p6 terminase small subunit phrog_1459 terminase small subunit head and packaging 1 997 1254
AOT23782.1 KX683428_p42 integrase phrog_1 integrase integration and excision 1 32080 33360
AOT23762.1 KX683428_p22 minor tail protein phrog_110 minor tail protein tail 1 17357 19120
AOT23778.1 KX683428_p38 hypothetical protein phrog_2311 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 30491 30931
AOT23781.1 KX683428_p41 hypothetical protein phrog_658 unknown function unknown function -1 31414 31716
AOT23763.1 KX683428_p23 minor tail protein phrog_1697 minor tail protein tail 1 19120 19632
AOT23816.1 KX683428_p77 hypothetical protein phrog_7536 unknown function unknown function 1 52120 52299
AOT23755.1 KX683428_p15 head-to-tail connector phrog_387 neck protein connector 1 9455 9739
AOT23823.1 KX683428_p84 hypothetical protein phrog_15782 unknown function unknown function 1 55479 55790
AOT23825.1 KX683428_p86 hypothetical protein phrog_4560 unknown function unknown function 1 56266 56523
AOT23804.1 KX683428_p65 HNH endonuclease phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 43864 44235
AOT23829.1 KX683428_p90 hypothetical protein phrog_2433 unknown function unknown function 1 57419 58108
AOT23817.1 KX683428_p78 hypothetical protein phrog_2342 unknown function unknown function 1 52296 53180
AOT23765.1 KX683428_p25 minor tail protein phrog_1736 minor tail protein tail 1 20784 21101
AOT23775.1 KX683428_p35 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 28761 29891
AOT23772.1 KX683428_p32 holin phrog_565 holin lysis 1 27736 28182
AOT23818.1 KX683428_p79 hypothetical protein phrog_7731 unknown function unknown function 1 53177 53656
AOT23766.1 KX683428_p26 minor tail protein phrog_746 minor tail protein tail 1 21085 23436
AOT23773.1 KX683428_p33 hypothetical protein phrog_3413 unknown function unknown function 1 28179 28526
AOT23769.1 KX683428_p29 hypothetical protein phrog_240 head protein head and packaging 1 24880 25236
AOT23826.1 KX683428_p87 hypothetical protein phrog_12202 unknown function unknown function 1 56523 56645
AOT23807.1 KX683428_p68 hypothetical protein phrog_3478 unknown function unknown function 1 47964 48410
AOT23796.1 KX683428_p56 hypothetical protein phrog_2596 unknown function unknown function 1 40342 40611
AOT23832.1 KX683428_p93 hypothetical protein phrog_4095 unknown function unknown function 1 58969 59667
AOT23758.1 KX683428_p19 tail assembly chaperone phrog_1861 unknown function unknown function 1 11100 11534
AOT23771.1 KX683428_p31 lysin B phrog_102 endolysin lysis 1 26937 27725
AOT23786.1 KX683428_p46 helix-turn-helix DNA binding domain protein phrog_20078 DNA binding protein DNA, RNA and nucleotide metabolism 1 35490 35609
AOT23808.1 KX683428_p69 hypothetical protein phrog_15207 unknown function unknown function 1 48407 48571
AOT23819.1 KX683428_p80 hypothetical protein phrog_14052 unknown function unknown function 1 53650 54132
AOT23799.1 KX683428_p60 hypothetical protein phrog_5466 unknown function unknown function 1 42031 42432
AOT23748.1 KX683428_p8 portal protein phrog_104 portal protein head and packaging 1 2673 4238
AOT23839.1 KX683428_p96 hypothetical protein phrog_15061 unknown function unknown function 1 60344 60790
AOT23801.1 KX683428_p62 hypothetical protein phrog_2388 unknown function unknown function 1 42811 42927
AOT23827.1 KX683428_p88 hypothetical protein phrog_20318 unknown function unknown function 1 56767 56949
AOT23809.1 KX683428_p70 helix-turn-helix DNA binding domain protein phrog_908 unknown function unknown function 1 48564 49481
AOT23836.1 KX683428_p2 hypothetical protein phrog_2293 unknown function unknown function 1 191 415
AOT23777.1 KX683428_p37 hypothetical protein phrog_16894 unknown function unknown function 1 30166 30342
AOT23761.1 KX683428_p21 minor tail protein phrog_106 minor tail protein tail 1 16221 17357
AOT23812.1 KX683428_p73 hypothetical protein phrog_7658 unknown function unknown function 1 50302 50538
AOT23787.1 KX683428_p47 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 35606 35818
AOT23788.1 KX683428_p48 hypothetical protein phrog_2908 unknown function unknown function 1 35822 36199
AOT23803.1 KX683428_p64 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 43622 43864
AOT23789.1 KX683428_p49 hypothetical protein singleton unknown function unknown function 1 36196 36684
AOT23798.1 KX683428_p59 hypothetical protein phrog_3492 unknown function unknown function 1 41791 41967
AOT23747.1 KX683428_p7 terminase large subunit phrog_2 terminase large subunit head and packaging 1 1226 2662
AOT23800.1 KX683428_p61 hypothetical protein phrog_542 unknown function unknown function 1 42632 42811
AOT23744.1 KX683428_p4 hypothetical protein phrog_14141 unknown function unknown function 1 576 716
AOT23794.1 KX683428_p54 hypothetical protein phrog_1956 unknown function unknown function 1 39480 39776
AOT23833.1 KX683428_p95 hypothetical protein phrog_747 unknown function unknown function 1 60105 60332
AOT23828.1 KX683428_p89 hypothetical protein phrog_23190 unknown function unknown function 1 57028 57291
AOT23749.1 KX683428_p9 capsid maturation protease phrog_1752 head maturation protease head and packaging 1 4264 6768
AOT23757.1 KX683428_p17 major tail protein phrog_117 major tail protein tail 1 10318 10929
AOT23750.1 KX683428_p10 hypothetical protein phrog_1757 unknown function unknown function 1 6765 6965
AOT23756.1 KX683428_p16 head-to-tail connector phrog_123 tail terminator connector 1 9736 10170
AOT23821.1 KX683428_p82 hypothetical protein phrog_2822 unknown function unknown function 1 54432 54899
AOT23754.1 KX683428_p14 head-to-tail connector phrog_763 head-tail adaptor connector 1 9121 9474
AOT23779.1 KX683428_p39 hypothetical protein phrog_11692 unknown function unknown function 1 30928 31119
AOT23797.1 KX683428_p58 exonuclease phrog_1674 exonuclease DNA, RNA and nucleotide metabolism 1 40913 41794
AOT23838.1 KX683428_p57 hypothetical protein phrog_2870 unknown function unknown function 1 40608 40916
AOT23814.1 KX683428_p75 protease phrog_1006 unknown function unknown function 1 50937 51500
AOT23752.1 KX683428_p12 major capsid protein phrog_10 major head protein head and packaging 1 7696 8619
AOT23805.1 KX683428_p66 DNA primase/helicase phrog_2478 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 44278 46887
AOT23790.1 KX683428_p50 hypothetical protein phrog_2286 unknown function unknown function 1 36776 37453
AOT23768.1 KX683428_p28 hypothetical protein phrog_416 minor tail protein tail 1 23723 24787
AOT23780.1 KX683428_p40 hypothetical protein phrog_9364 unknown function unknown function 1 31180 31365
AOT23831.1 KX683428_p92 hypothetical protein phrog_6135 unknown function unknown function 1 58518 58784
AOT23837.1 KX683428_p3 hypothetical protein phrog_37609 unknown function unknown function 1 412 579
AOT23776.1 KX683428_p36 hypothetical protein phrog_1042 unknown function unknown function 1 29888 30127
AOT23753.1 KX683428_p13 head-to-tail connector phrog_137 head-tail adaptor Ad1 connector 1 8738 9121
AOT23783.1 KX683428_p43 hypothetical protein phrog_8155 unknown function unknown function 1 33360 33704
AOT23784.1 KX683428_p44 hypothetical protein phrog_950 unknown function unknown function -1 33785 34675
AOT23760.1 KX683428_p20 tape measure protein phrog_971 endolysin lysis 1 11948 16126
AOT23767.1 KX683428_p27 minor tail protein phrog_3901 unknown function unknown function 1 23436 23723
AOT23811.1 KX683428_p72 hypothetical protein phrog_1338 unknown function unknown function 1 49916 50185
AOT23802.1 KX683428_p63 hypothetical protein phrog_1911 unknown function unknown function 1 43007 43525
AOT23820.1 KX683428_p81 hypothetical protein phrog_666 unknown function unknown function 1 54141 54329
AOT23770.1 KX683428_p30 lysin A phrog_317 endolysin lysis 1 25255 26940
AOT23751.1 KX683428_p11 scaffolding protein phrog_1793 head scaffolding protein head and packaging 1 7077 7625
AOT23759.1 KX683428_p18 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 11100 11944
AOT23806.1 KX683428_p67 resolvase phrog_3055 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 47285 47971
AOT23830.1 KX683428_p91 hypothetical protein phrog_16846 unknown function unknown function 1 58222 58470
AOT23822.1 KX683428_p83 hypothetical protein phrog_2493 unknown function unknown function 1 54889 55482
AOT23813.1 KX683428_p74 hypothetical protein phrog_5546 unknown function unknown function 1 50594 50806
AOT23774.1 KX683428_p34 hypothetical protein phrog_1738 unknown function unknown function 1 28523 28774
AOT23764.1 KX683428_p24 minor tail protein phrog_1565 minor tail protein tail 1 19681 20769
AOT23795.1 KX683428_p55 DNA polymerase III subunit phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 39788 40345
AOT23815.1 KX683428_p76 hypothetical protein phrog_6045 unknown function unknown function 1 51627 52022
AOT23810.1 KX683428_p71 hypothetical protein phrog_549 unknown function unknown function 1 49524 49919
AOT23785.1 KX683428_p45 helix-turn-helix DNA binding domain protein phrog_1746 transcriptional repressor transcription regulation -1 34734 35156
AOT23745.1 KX683428_p5 hypothetical protein phrog_2622 unknown function unknown function 1 833 1027
AOT23743.1 KX683428_p1 hypothetical protein phrog_5391 unknown function unknown function 1 51 194
AOT23793.1 KX683428_p53 hypothetical protein phrog_3186 unknown function unknown function 1 39064 39483
AOT23791.1 KX683428_p51 WhiB transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 37450 37719
AOT23792.1 KX683428_p52 hypothetical protein phrog_2781 unknown function unknown function 1 37716 39071
AOT23824.1 KX683428_p85 hypothetical protein phrog_2074 unknown function unknown function 1 55787 56050
AOT23834.1 KX683428_p97 hypothetical protein phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 60792 61079
AOT23835.1 KX683428_p94 hypothetical protein phrog_35138 unknown function unknown function 1 59829 60077