| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX683876 |
Definition |
Mycobacterium phage CactusRose, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus. |
DB of origin |
NUCCORE |
Length |
52659 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
97 |
%GC |
63.81 |
Number of singletons |
2 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AOZ64067.1 | KX683876_p26 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 21034 | 22836 |
| AOZ64058.1 | KX683876_p17 | head-to-tail connector protein | phrog_320 | head closure Hc1 | connector | 1 | 13099 | 13461 |
| AOZ64057.1 | KX683876_p16 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 12650 | 13099 |
| AOZ64080.1 | KX683876_p40 | hypothetical protein | phrog_1971 | unknown function | unknown function | -1 | 31464 | 31757 |
| AOZ64061.1 | KX683876_p20 | major tail protein | phrog_117 | major tail protein | tail | 1 | 14315 | 15166 |
| AOZ64052.1 | KX683876_p11 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 8429 | 9871 |
| AOZ64089.1 | KX683876_p49 | metallophosphoesterase | phrog_221 | metallo-phosphoesterase | other | -1 | 36218 | 36985 |
| AOZ64087.1 | KX683876_p47 | hypothetical protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 35289 | 36080 |
| AOZ64109.1 | KX683876_p71 | exonuclease/helicase | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 43533 | 44336 |
| AOZ64095.1 | KX683876_p56 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 39207 | 39341 |
| AOZ64075.1 | KX683876_p34 | minor tail protein | phrog_553 | minor tail protein | tail | 1 | 27944 | 28630 |
| AOZ64099.1 | KX683876_p61 | hypothetical protein | singleton | unknown function | unknown function | -1 | 40774 | 40911 |
| AOZ64116.1 | KX683876_p78 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 46848 | 47360 |
| AOZ64068.1 | KX683876_p27 | minor tail protein | phrog_352 | minor tail protein | tail | 1 | 22874 | 23320 |
| AOZ64110.1 | KX683876_p72 | transposase | phrog_4285 | transposase | integration and excision | -1 | 44333 | 45043 |
| AOZ64137.1 | KX683876_p86 | hypothetical protein | phrog_18314 | unknown function | unknown function | -1 | 49037 | 49219 |
| AOZ64055.1 | KX683876_p14 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 11331 | 12335 |
| AOZ64135.1 | KX683876_p38 | hypothetical protein | phrog_15070 | unknown function | unknown function | -1 | 31224 | 31322 |
| AOZ64125.1 | KX683876_p88 | hypothetical protein | phrog_932 | unknown function | unknown function | -1 | 49463 | 49615 |
| AOZ64083.1 | KX683876_p43 | hypothetical protein | phrog_1781 | unknown function | unknown function | -1 | 33994 | 34224 |
| AOZ64046.1 | KX683876_p5 | structural protein | phrog_553 | minor tail protein | tail | 1 | 3093 | 3794 |
| AOZ64085.1 | KX683876_p45 | hypothetical protein | phrog_2094 | unknown function | unknown function | -1 | 34781 | 35113 |
| AOZ64051.1 | KX683876_p10 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 6744 | 8432 |
| AOZ64092.1 | KX683876_p52 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38048 | 38569 |
| AOZ64064.1 | KX683876_p23 | tape measure protein | phrog_305 | tail length tape measure protein | tail | 1 | 16092 | 18752 |
| AOZ64108.1 | KX683876_p70 | hypothetical protein | phrog_5961 | unknown function | unknown function | -1 | 43346 | 43504 |
| AOZ64050.1 | KX683876_p9 | lysin B | phrog_102 | endolysin | lysis | 1 | 5756 | 6724 |
| AOZ64104.1 | KX683876_p66 | hypothetical protein | phrog_780 | unknown function | unknown function | -1 | 42296 | 42565 |
| AOZ64136.1 | KX683876_p60 | hypothetical protein | phrog_1311 | unknown function | unknown function | -1 | 40646 | 40777 |
| AOZ64098.1 | KX683876_p59 | membrane domain protein | phrog_1019 | unknown function | unknown function | -1 | 40563 | 40649 |
| AOZ64072.1 | KX683876_p31 | D-ala-D-ala carboxypeptidase | phrog_382 | minor tail protein with lysin activity | tail | 1 | 25832 | 27313 |
| AOZ64093.1 | KX683876_p54 | hypothetical protein | phrog_1783 | unknown function | unknown function | -1 | 38909 | 39073 |
| AOZ64138.1 | KX683876_p97 | hypothetical protein | singleton | unknown function | unknown function | 1 | 52434 | 52568 |
| AOZ64123.1 | KX683876_p85 | hypothetical protein | phrog_2093 | unknown function | unknown function | -1 | 48912 | 49040 |
| AOZ64106.1 | KX683876_p68 | hypothetical protein | phrog_2184 | unknown function | unknown function | -1 | 42852 | 43163 |
| AOZ64102.1 | KX683876_p64 | hypothetical protein | phrog_2507 | unknown function | unknown function | -1 | 41995 | 42171 |
| AOZ64133.1 | KX683876_p96 | membrane domain protein | phrog_828 | unknown function | unknown function | -1 | 52061 | 52264 |
| AOZ64121.1 | KX683876_p83 | membrane domain protein | phrog_1155 | unknown function | unknown function | -1 | 48560 | 48748 |
| AOZ64103.1 | KX683876_p65 | membrane domain protein | phrog_1705 | unknown function | unknown function | -1 | 42168 | 42299 |
| AOZ64062.1 | KX683876_p22 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 15287 | 15658 |
| AOZ64065.1 | KX683876_p24 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 18776 | 20833 |
| AOZ64086.1 | KX683876_p46 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 35086 | 35292 |
| AOZ64112.1 | KX683876_p74 | hypothetical protein | phrog_6068 | unknown function | unknown function | -1 | 45838 | 45951 |
| AOZ64044.1 | KX683876_p3 | hypothetical protein | phrog_2830 | unknown function | unknown function | 1 | 1541 | 1771 |
| AOZ64131.1 | KX683876_p94 | hypothetical protein | phrog_5542 | unknown function | unknown function | -1 | 51517 | 51867 |
| AOZ64120.1 | KX683876_p82 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 48363 | 48563 |
| AOZ64077.1 | KX683876_p36 | hypothetical protein | phrog_1966 | unknown function | unknown function | -1 | 30551 | 30823 |
| AOZ64082.1 | KX683876_p42 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 32131 | 33957 |
| AOZ64054.1 | KX683876_p13 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 10808 | 11320 |
| AOZ64115.1 | KX683876_p77 | hypothetical protein | phrog_1809 | unknown function | unknown function | -1 | 46411 | 46806 |
| AOZ64078.1 | KX683876_p37 | hypothetical protein | phrog_2387 | nucleotide kinase | other | -1 | 30820 | 31224 |
| AOZ64097.1 | KX683876_p58 | endonuclease VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 40085 | 40570 |
| AOZ64100.1 | KX683876_p62 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 40908 | 41174 |
| AOZ64045.1 | KX683876_p4 | tail protein | phrog_1197 | tail protein | tail | 1 | 2013 | 3083 |
| AOZ64048.1 | KX683876_p7 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 4076 | 4333 |
| AOZ64091.1 | KX683876_p51 | hypothetical protein | phrog_5618 | unknown function | unknown function | -1 | 37725 | 38051 |
| AOZ64081.1 | KX683876_p41 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 31754 | 32110 |
| AOZ64043.1 | KX683876_p2 | terminase small subunit | phrog_226 | minor tail protein | tail | 1 | 929 | 1369 |
| AOZ64119.1 | KX683876_p81 | hypothetical protein | phrog_6510 | unknown function | unknown function | -1 | 48184 | 48366 |
| AOZ64073.1 | KX683876_p32 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 27357 | 27725 |
| AOZ64060.1 | KX683876_p19 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 13860 | 14306 |
| AOZ64047.1 | KX683876_p6 | tail protein | phrog_1718 | tail protein | tail | 1 | 3808 | 4068 |
| AOZ64063.1 | KX683876_p21 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 15287 | 16080 |
| AOZ64126.1 | KX683876_p89 | hypothetical protein | phrog_9026 | unknown function | unknown function | -1 | 49612 | 49824 |
| AOZ64076.1 | KX683876_p35 | integrase | phrog_95 | integrase | integration and excision | 1 | 28926 | 30428 |
| AOZ64130.1 | KX683876_p93 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 51317 | 51517 |
| AOZ64074.1 | KX683876_p33 | hypothetical protein | phrog_1560 | unknown function | unknown function | 1 | 27735 | 27944 |
| AOZ64079.1 | KX683876_p39 | hypothetical protein | phrog_1860 | unknown function | unknown function | -1 | 31372 | 31467 |
| AOZ64117.1 | KX683876_p79 | membrane domain protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 47622 | 47921 |
| AOZ64107.1 | KX683876_p69 | DNA binding domain protein | phrog_1763 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 43167 | 43349 |
| AOZ64056.1 | KX683876_p15 | head-to-tail connector protein | phrog_1857 | head-tail connector protein | connector | 1 | 12414 | 12650 |
| AOZ64053.1 | KX683876_p12 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 9868 | 10749 |
| AOZ64122.1 | KX683876_p84 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 48748 | 48915 |
| AOZ64069.1 | KX683876_p28 | minor tail protein | phrog_981 | minor tail protein | tail | 1 | 23317 | 23664 |
| AOZ64132.1 | KX683876_p95 | membrane domain protein | phrog_2212 | unknown function | unknown function | -1 | 51864 | 51947 |
| AOZ64094.1 | KX683876_p55 | hypothetical protein | phrog_13342 | unknown function | unknown function | -1 | 39073 | 39210 |
| AOZ64127.1 | KX683876_p90 | hypothetical protein | phrog_26095 | unknown function | unknown function | -1 | 49821 | 49994 |
| AOZ64049.1 | KX683876_p8 | lysin A | phrog_317 | endolysin | lysis | 1 | 4333 | 5766 |
| AOZ64090.1 | KX683876_p50 | hypothetical protein | phrog_1167 | phosphofructokinase | other | -1 | 36982 | 37728 |
| AOZ64088.1 | KX683876_p48 | hypothetical protein | phrog_1782 | site-specific recombination directionality factor RDF | integration and excision | -1 | 36073 | 36213 |
| AOZ64129.1 | KX683876_p92 | hypothetical protein | phrog_3414 | unknown function | unknown function | -1 | 50865 | 51149 |
| AOZ64042.1 | KX683876_p1 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 598 | 894 |
| AOZ64066.1 | KX683876_p25 | hypothetical protein | phrog_1543 | minor tail protein | tail | 1 | 20852 | 21034 |
| AOZ64124.1 | KX683876_p87 | hypothetical protein | phrog_2974 | unknown function | unknown function | -1 | 49216 | 49437 |
| AOZ64113.1 | KX683876_p75 | hypothetical protein | phrog_5947 | unknown function | unknown function | -1 | 45948 | 46112 |
| AOZ64118.1 | KX683876_p80 | hypothetical protein | phrog_1720 | unknown function | unknown function | -1 | 47918 | 48187 |
| AOZ64114.1 | KX683876_p76 | membrane domain protein | phrog_1584 | unknown function | unknown function | -1 | 46109 | 46414 |
| AOZ64096.1 | KX683876_p57 | DNA adenine methylase | phrog_56 | DNA methyltransferase | other | -1 | 39360 | 40088 |
| AOZ64059.1 | KX683876_p18 | head-to-tail connector protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 13461 | 13856 |
| AOZ64128.1 | KX683876_p91 | DNA (cytosine-5) methyltransferase | phrog_363 | DNA methyltransferase | other | -1 | 50123 | 50800 |
| AOZ64111.1 | KX683876_p73 | hypothetical protein | phrog_4604 | unknown function | unknown function | -1 | 45380 | 45841 |
| AOZ64134.1 | KX683876_p53 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38415 | 38930 |
| AOZ64105.1 | KX683876_p67 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 42562 | 42855 |
| AOZ64084.1 | KX683876_p44 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 34255 | 34746 |
| AOZ64070.1 | KX683876_p29 | minor tail protein | phrog_1397 | unknown function | unknown function | 1 | 23661 | 23960 |
| AOZ64071.1 | KX683876_p30 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 23986 | 25839 |
| AOZ64101.1 | KX683876_p63 | dsDNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 41174 | 41995 |