Genomic map of Mycobacterium phage Qobbit (KX685355)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX685355
Definition
Mycobacterium phage Qobbit, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
52911
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
96
%GC
62.57
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AOT26157.1 KX685355_p38 DNA-binding domain containing protein phrog_10331 DNA binding protein DNA, RNA and nucleotide metabolism -1 28226 28540
AOT26179.1 KX685355_p61 endonuclease VII phrog_17507 endonuclease VII DNA, RNA and nucleotide metabolism -1 39259 39408
AOT26167.1 KX685355_p48 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 32349 33053
AOT26181.1 KX685355_p63 hypothetical protein phrog_1498 unknown function unknown function -1 39820 39969
AOT26127.1 KX685355_p6 minor tail protein phrog_1260 minor tail protein tail 1 3227 4189
AOT26207.1 KX685355_p89 hypothetical protein phrog_10931 unknown function unknown function -1 49205 49339
AOT26137.1 KX685355_p17 head-to-tail connector protein phrog_3101 unknown function unknown function 1 13943 14167
AOT26139.1 KX685355_p19 head-to-tail connector protein phrog_830 head-tail connector protein connector 1 14544 14741
AOT26196.1 KX685355_p78 hypothetical protein phrog_3963 unknown function unknown function -1 45244 45525
AOT26217.1 KX685355_p59 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38717 39100
AOT26176.1 KX685355_p57 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 37982 38254
AOT26128.1 KX685355_p7 minor tail protein phrog_819 tail protein tail 1 4189 5220
AOT26180.1 KX685355_p62 hypothetical protein phrog_9791 unknown function unknown function -1 39668 39823
AOT26165.1 KX685355_p46 helix-turn-helix DNA binding domain protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 31812 32138
AOT26131.1 KX685355_p11 holin phrog_526 holin lysis 1 7753 8139
AOT26164.1 KX685355_p45 hypothetical protein phrog_4326 unknown function unknown function -1 31516 31812
AOT26215.1 KX685355_p1 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 379 1158
AOT26158.1 KX685355_p39 hypothetical protein phrog_10689 unknown function unknown function -1 28521 28733
AOT26201.1 KX685355_p83 hypothetical protein phrog_3256 unknown function unknown function -1 47025 47390
AOT26203.1 KX685355_p85 hypothetical protein phrog_421 unknown function unknown function -1 47668 48429
AOT26198.1 KX685355_p80 hypothetical protein phrog_1342 unknown function unknown function -1 45761 45988
AOT26129.1 KX685355_p8 hypothetical protein phrog_356 minor tail protein tail 1 5224 5895
AOT26195.1 KX685355_p77 hypothetical protein phrog_5531 unknown function unknown function -1 45023 45241
AOT26126.1 KX685355_p5 hypothetical protein phrog_226 minor tail protein tail 1 2666 3139
AOT26190.1 KX685355_p72 exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 42588 43430
AOT26206.1 KX685355_p88 hypothetical protein phrog_586 unknown function unknown function -1 48841 49194
AOT26146.1 KX685355_p26 tape measure protein phrog_305 tail length tape measure protein tail 1 17620 20529
AOT26219.1 KX685355_p34 hypothetical protein phrog_13533 unknown function unknown function 1 26553 26975
AOT26163.1 KX685355_p44 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 29719 31512
AOT26159.1 KX685355_p40 hypothetical protein phrog_9466 unknown function unknown function -1 28721 28924
AOT26140.1 KX685355_p20 head-to-tail connector protein phrog_320 head closure Hc1 connector 1 14738 15106
AOT26199.1 KX685355_p81 DNA methylase phrog_1008 DNA methyltransferase other -1 46008 46523
AOT26191.1 KX685355_p73 repressor phrog_1562 unknown function unknown function -1 43427 43870
AOT26214.1 KX685355_p96 hypothetical protein phrog_1676 unknown function unknown function -1 51151 51447
AOT26149.1 KX685355_p29 minor tail protein phrog_110 minor tail protein tail 1 21776 23569
AOT26133.1 KX685355_p13 portal protein phrog_104 portal protein head and packaging 1 9923 11410
AOT26169.1 KX685355_p50 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 33660 35699
AOT26216.1 KX685355_p4 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2305 2625
AOT26144.1 KX685355_p25 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 16644 17039
AOT26153.1 KX685355_p33 hypothetical protein phrog_2570 unknown function unknown function 1 26238 26432
AOT26130.1 KX685355_p10 lysin A phrog_317 endolysin lysis 1 6176 7756
AOT26193.1 KX685355_p75 hypothetical protein phrog_1173 unknown function unknown function -1 44651 44815
AOT26155.1 KX685355_p36 dsDNA partitioning protein phrog_2639 Arc-like repressor transcription regulation 1 27616 27885
AOT26212.1 KX685355_p94 hypothetical protein phrog_2499 unknown function unknown function -1 50830 51021
AOT26124.1 KX685355_p2 hydrolase phrog_5234 unknown function unknown function 1 1050 2108
AOT26168.1 KX685355_p49 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 33133 33648
AOT26138.1 KX685355_p18 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 14170 14547
AOT26156.1 KX685355_p37 hypothetical protein phrog_2697 unknown function unknown function -1 28029 28229
AOT26213.1 KX685355_p95 hypothetical protein phrog_1445 unknown function unknown function -1 51037 51120
AOT26143.1 KX685355_p23 major tail protein phrog_117 major tail protein tail 1 15930 16526
AOT26209.1 KX685355_p91 hypothetical protein phrog_10771 unknown function unknown function -1 49505 49876
AOT26183.1 KX685355_p65 hypothetical protein phrog_397 unknown function unknown function -1 40127 40360
AOT26194.1 KX685355_p76 hypothetical protein phrog_7865 unknown function unknown function -1 44846 45016
AOT26202.1 KX685355_p84 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 47390 47653
AOT26178.1 KX685355_p60 hypothetical protein phrog_18676 unknown function unknown function -1 39097 39237
AOT26132.1 KX685355_p12 terminase phrog_9 terminase large subunit head and packaging 1 8160 9926
AOT26152.1 KX685355_p32 minor tail protein phrog_737 minor tail protein tail 1 24407 26173
AOT26151.1 KX685355_p31 hypothetical protein phrog_404 minor tail protein tail 1 24038 24406
AOT26189.1 KX685355_p71 hypothetical protein phrog_642 unknown function unknown function -1 42339 42557
AOT26211.1 KX685355_p93 hypothetical protein phrog_1392 unknown function unknown function -1 50117 50827
AOT26148.1 KX685355_p28 hypothetical protein phrog_1543 minor tail protein tail 1 21567 21779
AOT26154.1 KX685355_p35 dsDNA partitioning protein phrog_164 ParA-like partition protein DNA, RNA and nucleotide metabolism 1 26997 27623
AOT26134.1 KX685355_p14 capsid maturation protease phrog_193 head maturation protease head and packaging 1 11407 12267
AOT26135.1 KX685355_p15 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 12297 12830
AOT26136.1 KX685355_p16 major capsid protein phrog_10 major head protein head and packaging 1 12878 13837
AOT26205.1 KX685355_p87 hypothetical protein phrog_3718 unknown function unknown function -1 48572 48817
AOT26175.1 KX685355_p56 hypothetical protein phrog_474 phosphofructokinase other -1 37707 37985
AOT26184.1 KX685355_p66 hypothetical protein phrog_542 unknown function unknown function -1 40527 40682
AOT26160.1 KX685355_p41 hypothetical protein phrog_383 unknown function unknown function -1 28921 29292
AOT26125.1 KX685355_p3 hypothetical protein phrog_10336 unknown function unknown function 1 2108 2335
AOT26182.1 KX685355_p64 hypothetical protein phrog_8981 unknown function unknown function -1 39954 40130
AOT26187.1 KX685355_p69 hypothetical protein phrog_9978 unknown function unknown function -1 41888 42052
AOT26192.1 KX685355_p74 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 43867 44403
AOT26171.1 KX685355_p52 hypothetical protein phrog_499 unknown function unknown function -1 35874 36137
AOT26186.1 KX685355_p68 dsDNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 41078 41887
AOT26166.1 KX685355_p47 surface protein phrog_690 unknown function unknown function -1 32135 32347
AOT26173.1 KX685355_p54 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 36271 36936
AOT26177.1 KX685355_p58 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38254 38766
AOT26200.1 KX685355_p82 DNA methylase phrog_363 DNA methyltransferase other -1 46474 47022
AOT26162.1 KX685355_p43 hypothetical protein phrog_896 unknown function unknown function -1 29449 29688
AOT26188.1 KX685355_p70 hypothetical protein phrog_520 unknown function unknown function -1 42049 42327
AOT26150.1 KX685355_p30 hypothetical protein phrog_352 minor tail protein tail 1 23587 24036
AOT26204.1 KX685355_p86 hypothetical protein phrog_855 unknown function unknown function -1 48432 48566
AOT26172.1 KX685355_p53 hypothetical protein phrog_10515 unknown function unknown function -1 36134 36274
AOT26218.1 KX685355_p9 hypothetical protein phrog_1087 unknown function unknown function 1 6009 6176
AOT26145.1 KX685355_p24 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 16644 17491
AOT26142.1 KX685355_p22 head-to-tail connector protein phrog_123 tail terminator connector 1 15492 15914
AOT26174.1 KX685355_p55 metallophosphoesterase phrog_221 metallo-phosphoesterase other -1 36940 37710
AOT26210.1 KX685355_p92 hypothetical protein phrog_3831 unknown function unknown function -1 49879 50109
AOT26208.1 KX685355_p90 hypothetical protein phrog_519 unknown function unknown function -1 49336 49503
AOT26170.1 KX685355_p51 hypothetical protein phrog_2046 unknown function unknown function -1 35699 35902
AOT26185.1 KX685355_p67 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision -1 40679 41065
AOT26197.1 KX685355_p79 hypothetical protein phrog_8086 unknown function unknown function -1 45525 45761
AOT26161.1 KX685355_p42 hypothetical protein phrog_7968 unknown function unknown function -1 29285 29449
AOT26147.1 KX685355_p27 minor tail protein phrog_106 minor tail protein tail 1 20557 21570
AOT26141.1 KX685355_p21 head-to-tail connector protein phrog_321 tail completion or Neck1 protein connector 1 15106 15495