| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX688047 |
Definition |
Mycobacterium phage Marcoliusprime, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus. |
DB of origin |
NUCCORE |
Length |
58129 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
92 |
%GC |
68.24 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AOZ64361.1 | KX688047_p22 | minor tail protein | phrog_1736 | minor tail protein | tail | 1 | 18423 | 18677 |
| AOZ64413.1 | KX688047_p76 | helix-turn-helix DNA binding domain protein | phrog_908 | unknown function | unknown function | 1 | 51116 | 52018 |
| AOZ64340.1 | KX688047_p1 | hypothetical protein | phrog_5391 | unknown function | unknown function | 1 | 88 | 222 |
| AOZ64405.1 | KX688047_p68 | hypothetical protein | phrog_1911 | unknown function | unknown function | 1 | 45487 | 46005 |
| AOZ64426.1 | KX688047_p89 | hypothetical protein | phrog_12460 | unknown function | unknown function | 1 | 56965 | 57201 |
| AOZ64406.1 | KX688047_p69 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 46092 | 46337 |
| AOZ64389.1 | KX688047_p52 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 38608 | 38817 |
| AOZ64385.1 | KX688047_p46 | immunity repressor | phrog_1746 | transcriptional repressor | transcription regulation | -1 | 36680 | 37051 |
| AOZ64408.1 | KX688047_p71 | HNH endonuclease | phrog_1571 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 46501 | 46845 |
| AOZ64423.1 | KX688047_p86 | hypothetical protein | phrog_26442 | unknown function | unknown function | 1 | 55714 | 55953 |
| AOZ64383.1 | KX688047_p44 | hypothetical protein | phrog_27584 | unknown function | unknown function | 1 | 35428 | 35685 |
| AOZ64381.1 | KX688047_p42 | queuine tRNA-ribosyltransferase | phrog_1279 | queuine tRNA-ribosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 33015 | 33860 |
| AOZ64366.1 | KX688047_p27 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 22685 | 23053 |
| AOZ64359.1 | KX688047_p20 | minor tail protein | phrog_1697 | minor tail protein | tail | 1 | 16782 | 17246 |
| AOZ64417.1 | KX688047_p80 | hypothetical protein | phrog_5546 | unknown function | unknown function | 1 | 53059 | 53271 |
| AOZ64388.1 | KX688047_p51 | hypothetical protein | phrog_3903 | unknown function | unknown function | 1 | 38313 | 38594 |
| AOZ64403.1 | KX688047_p66 | hypothetical protein | phrog_5466 | unknown function | unknown function | 1 | 45035 | 45244 |
| AOZ64376.1 | KX688047_p37 | hypothetical protein | phrog_14992 | unknown function | unknown function | 1 | 29885 | 30223 |
| AOZ64369.1 | KX688047_p30 | holin | phrog_565 | holin | lysis | 1 | 26028 | 26414 |
| AOZ64354.1 | KX688047_p16 | tail assembly chaperone | phrog_1861 | unknown function | unknown function | 1 | 9253 | 9702 |
| AOZ64416.1 | KX688047_p79 | hypothetical protein | phrog_14958 | unknown function | unknown function | 1 | 52765 | 52902 |
| AOZ64374.1 | KX688047_p35 | helix-turn-helix DNA binding domain protein | phrog_12831 | transcriptional repressor | transcription regulation | 1 | 28971 | 29306 |
| AOZ64391.1 | KX688047_p54 | WhiB family transcription regulator | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 39559 | 39792 |
| AOZ64421.1 | KX688047_p84 | hypothetical protein | phrog_666 | unknown function | unknown function | 1 | 54874 | 55095 |
| AOZ64341.1 | KX688047_p2 | hypothetical protein | phrog_2622 | unknown function | unknown function | 1 | 224 | 436 |
| AOZ64392.1 | KX688047_p55 | hydrolase | phrog_15484 | hydrolase | other | 1 | 39789 | 40547 |
| AOZ64350.1 | KX688047_p11 | head-to-tail connector protein | phrog_763 | head-tail adaptor | connector | 1 | 7362 | 7712 |
| AOZ64368.1 | KX688047_p29 | lysin B | phrog_102 | endolysin | lysis | 1 | 24807 | 26009 |
| AOZ64396.1 | KX688047_p59 | hypothetical protein | phrog_18188 | unknown function | unknown function | 1 | 41832 | 41948 |
| AOZ64401.1 | KX688047_p64 | HicA-like toxin in toxin/antitoxin system | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 44409 | 44627 |
| AOZ64404.1 | KX688047_p67 | hypothetical protein | phrog_2388 | unknown function | unknown function | 1 | 45299 | 45418 |
| AOZ64346.1 | KX688047_p7 | hypothetical protein | phrog_1757 | unknown function | unknown function | 1 | 5091 | 5276 |
| AOZ64372.1 | KX688047_p33 | hypothetical protein | phrog_1738 | unknown function | unknown function | 1 | 27394 | 27642 |
| AOZ64351.1 | KX688047_p12 | head-to-tail connector protein | phrog_387 | neck protein | connector | 1 | 7693 | 7965 |
| AOZ64422.1 | KX688047_p85 | hypothetical protein | phrog_7638 | unknown function | unknown function | 1 | 55229 | 55717 |
| AOZ64415.1 | KX688047_p78 | hypothetical protein | phrog_1338 | unknown function | unknown function | 1 | 52473 | 52742 |
| AOZ64343.1 | KX688047_p4 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 652 | 2076 |
| AOZ64349.1 | KX688047_p10 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 6976 | 7362 |
| AOZ64347.1 | KX688047_p8 | scaffolding protein | phrog_1793 | head scaffolding protein | head and packaging | 1 | 5349 | 5891 |
| AOZ64344.1 | KX688047_p5 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2088 | 3593 |
| AOZ64386.1 | KX688047_p49 | hypothetical protein | phrog_15371 | unknown function | unknown function | 1 | 37801 | 38022 |
| AOZ64397.1 | KX688047_p60 | DNA polymerase III subunit | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 42031 | 42564 |
| AOZ64402.1 | KX688047_p65 | hypothetical protein | phrog_14762 | unknown function | unknown function | 1 | 44718 | 45038 |
| AOZ64418.1 | KX688047_p81 | protease | phrog_1006 | unknown function | unknown function | 1 | 53325 | 53894 |
| AOZ64393.1 | KX688047_p56 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | 1 | 40544 | 41176 |
| AOZ64394.1 | KX688047_p57 | hypothetical protein | phrog_3186 | unknown function | unknown function | 1 | 41169 | 41564 |
| AOZ64353.1 | KX688047_p14 | major tail protein | phrog_117 | major tail protein | tail | 1 | 8532 | 9146 |
| AOZ64427.1 | KX688047_p90 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 57214 | 57510 |
| AOZ64412.1 | KX688047_p75 | hypothetical protein | phrog_15365 | unknown function | unknown function | 1 | 50794 | 51123 |
| AOZ64400.1 | KX688047_p63 | hypothetical protein | phrog_15653 | unknown function | unknown function | 1 | 44236 | 44412 |
| AOZ64370.1 | KX688047_p31 | minor tail protein | phrog_1298 | minor tail protein | tail | 1 | 26497 | 26916 |
| AOZ64373.1 | KX688047_p34 | exonuclease | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 27629 | 28813 |
| AOZ64428.1 | KX688047_p91 | hypothetical protein | phrog_15574 | unknown function | unknown function | 1 | 57523 | 57693 |
| AOZ64348.1 | KX688047_p9 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 5947 | 6864 |
| AOZ64390.1 | KX688047_p53 | helix-turn-helix DNA binding domain protein | phrog_2286 | unknown function | unknown function | 1 | 38822 | 39562 |
| AOZ64419.1 | KX688047_p82 | helix-turn-helix DNA binding domain protein | phrog_2342 | unknown function | unknown function | 1 | 53934 | 54722 |
| AOZ64395.1 | KX688047_p58 | hypothetical protein | phrog_1956 | unknown function | unknown function | 1 | 41557 | 41835 |
| AOZ64352.1 | KX688047_p13 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 7962 | 8381 |
| AOZ64362.1 | KX688047_p23 | minor tail protein | phrog_746 | minor tail protein | tail | 1 | 18661 | 21000 |
| AOZ64356.1 | KX688047_p17 | tape measure protein | phrog_971 | endolysin | lysis | 1 | 10116 | 13784 |
| AOZ64382.1 | KX688047_p43 | integrase | phrog_1 | integrase | integration and excision | 1 | 34317 | 35417 |
| AOZ64379.1 | KX688047_p40 | hypothetical protein | phrog_806 | unknown function | unknown function | -1 | 31494 | 32057 |
| AOZ64429.1 | KX688047_p92 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 57690 | 57968 |
| AOZ64371.1 | KX688047_p32 | minor tail protein | phrog_726 | unknown function | unknown function | 1 | 26906 | 27397 |
| AOZ64414.1 | KX688047_p77 | hypothetical protein | phrog_6045 | unknown function | unknown function | 1 | 52015 | 52476 |
| AOZ64345.1 | KX688047_p6 | capsid maturation protease | phrog_1752 | head maturation protease | head and packaging | 1 | 3574 | 5094 |
| AOZ64410.1 | KX688047_p73 | resolvase | phrog_3055 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 49845 | 50486 |
| AOZ64367.1 | KX688047_p28 | lysin A | phrog_1519 | endolysin | lysis | 1 | 23083 | 24801 |
| AOZ64431.1 | KX688047_p47 | CRO protein | phrog_1702 | transcriptional repressor | transcription regulation | 1 | 37222 | 37542 |
| AOZ64375.1 | KX688047_p36 | helix-turn-helix DNA binding domain protein | phrog_2311 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 29437 | 29841 |
| AOZ64411.1 | KX688047_p74 | hypothetical protein | phrog_17570 | unknown function | unknown function | 1 | 50483 | 50797 |
| AOZ64364.1 | KX688047_p25 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 21282 | 22277 |
| AOZ64398.1 | KX688047_p61 | hydrolase | phrog_789 | esterase/lipase | other | 1 | 42561 | 43385 |
| AOZ64430.1 | KX688047_p48 | excise | phrog_1840 | excisionase | integration and excision | 1 | 37539 | 37796 |
| AOZ64342.1 | KX688047_p3 | terminase small subunit | phrog_1459 | terminase small subunit | head and packaging | 1 | 426 | 674 |
| AOZ64384.1 | KX688047_p45 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 35744 | 36592 |
| AOZ64399.1 | KX688047_p62 | exonuclease | phrog_1674 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 43382 | 44239 |
| AOZ64387.1 | KX688047_p50 | hypothetical protein | phrog_2654 | unknown function | unknown function | 1 | 38098 | 38316 |
| AOZ64355.1 | KX688047_p15 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 9253 | 10115 |
| AOZ64357.1 | KX688047_p18 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 13889 | 15016 |
| AOZ64378.1 | KX688047_p39 | hypothetical protein | phrog_549 | unknown function | unknown function | -1 | 31114 | 31497 |
| AOZ64360.1 | KX688047_p21 | minor tail protein | phrog_1565 | minor tail protein | tail | 1 | 17339 | 18418 |
| AOZ64424.1 | KX688047_p87 | hypothetical protein | phrog_6135 | unknown function | unknown function | 1 | 56075 | 56338 |
| AOZ64409.1 | KX688047_p72 | DNA primase/helicase | phrog_2478 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 46892 | 49423 |
| AOZ64377.1 | KX688047_p38 | hypothetical protein | phrog_2433 | unknown function | unknown function | 1 | 30342 | 31046 |
| AOZ64425.1 | KX688047_p88 | hypothetical protein | phrog_15374 | unknown function | unknown function | 1 | 56462 | 56791 |
| AOZ64407.1 | KX688047_p70 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 46337 | 46504 |
| AOZ64365.1 | KX688047_p26 | hypothetical protein | phrog_2269 | unknown function | unknown function | 1 | 22292 | 22531 |
| AOZ64420.1 | KX688047_p83 | hypothetical protein | phrog_25972 | unknown function | unknown function | 1 | 54719 | 54880 |
| AOZ64380.1 | KX688047_p41 | DNA binding protein | phrog_4095 | unknown function | unknown function | 1 | 32195 | 32893 |
| AOZ64358.1 | KX688047_p19 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 15013 | 16782 |
| AOZ64363.1 | KX688047_p24 | minor tail protein | phrog_3901 | unknown function | unknown function | 1 | 21001 | 21282 |