Genomic map of Mycobacterium phage Zephyr (KX712238)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX712238
Definition
Mycobacterium phage Zephyr, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
52320
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
92
%GC
63.93
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APQ42080.1 KX712238_p68 hypothetical protein phrog_2184 unknown function unknown function -1 42225 42545
APQ42102.1 KX712238_p90 hypothetical protein phrog_5542 unknown function unknown function -1 51170 51529
APQ42040.1 KX712238_p26 minor tail protein phrog_1543 minor tail protein tail 1 21033 21215
APQ42101.1 KX712238_p89 hypothetical protein phrog_1387 unknown function unknown function -1 50982 51170
APQ42092.1 KX712238_p80 hypothetical protein phrog_1387 unknown function unknown function -1 47710 47913
APQ42044.1 KX712238_p30 minor tail protein phrog_1397 unknown function unknown function 1 23842 24189
APQ42075.1 KX712238_p63 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 40529 40825
APQ42031.1 KX712238_p17 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 13005 13454
APQ42026.1 KX712238_p12 portal protein phrog_104 portal protein head and packaging 1 8548 9990
APQ42091.1 KX712238_p79 hypothetical protein phrog_1720 unknown function unknown function -1 47444 47713
APQ42018.1 KX712238_p4 hypothetical protein phrog_7087 unknown function unknown function 1 1827 2117
APQ42086.1 KX712238_p74 hypothetical protein phrog_2730 unknown function unknown function -1 45450 45623
APQ42096.1 KX712238_p84 hypothetical protein phrog_932 unknown function unknown function -1 48411 48560
APQ42069.1 KX712238_p55 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38348 38926
APQ42084.1 KX712238_p72 hypothetical protein phrog_4285 transposase integration and excision -1 43909 44616
APQ42028.1 KX712238_p14 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 10926 11438
APQ42056.1 KX712238_p42 hypothetical protein phrog_1971 unknown function unknown function -1 32072 32359
APQ42067.1 KX712238_p53 hypothetical protein phrog_1167 phosphofructokinase other -1 37516 38133
APQ42024.1 KX712238_p10 lysin B phrog_102 endolysin lysis 1 5875 6843
APQ42020.1 KX712238_p6 hypothetical protein phrog_553 minor tail protein tail 1 3214 3915
APQ42025.1 KX712238_p11 terminase large subunit phrog_9 terminase large subunit head and packaging 1 6863 8551
APQ42106.1 KX712238_p56 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38715 39230
APQ42089.1 KX712238_p77 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 46374 46886
APQ42041.1 KX712238_p27 minor tail protein phrog_110 minor tail protein tail 1 21215 23017
APQ42072.1 KX712238_p59 hypothetical protein phrog_397 unknown function unknown function -1 39441 39575
APQ42053.1 KX712238_p39 hypothetical protein phrog_1966 unknown function unknown function -1 31544 31816
APQ42055.1 KX712238_p41 hypothetical protein phrog_1860 unknown function unknown function -1 31980 32075
APQ42103.1 KX712238_p91 hypothetical protein phrog_2212 unknown function unknown function -1 51526 51624
APQ42058.1 KX712238_p44 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 32733 34559
APQ42100.1 KX712238_p88 hypothetical protein phrog_2985 unknown function unknown function -1 50546 50701
APQ42027.1 KX712238_p13 capsid maturation protease phrog_193 head maturation protease head and packaging 1 9987 10868
APQ42032.1 KX712238_p18 head-to-tail connector protein phrog_320 head closure Hc1 connector 1 13454 13816
APQ42015.1 KX712238_p1 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 598 894
APQ42105.1 KX712238_p60 hypothetical protein phrog_10835 unknown function unknown function -1 39688 39858
APQ42019.1 KX712238_p5 hypothetical protein phrog_1197 tail protein tail 1 2134 3204
APQ42054.1 KX712238_p40 hypothetical protein phrog_2035 unknown function unknown function -1 31813 31983
APQ42099.1 KX712238_p87 hypothetical protein phrog_3414 unknown function unknown function -1 49961 50245
APQ42049.1 KX712238_p35 hypothetical protein phrog_754 minor tail protein tail 1 28152 29057
APQ42066.1 KX712238_p52 hypothetical protein phrog_1503 unknown function unknown function -1 37346 37519
APQ42065.1 KX712238_p51 recombination directionality factor phrog_221 metallo-phosphoesterase other -1 36582 37349
APQ42077.1 KX712238_p65 hypothetical protein phrog_2507 unknown function unknown function -1 41646 41819
APQ42098.1 KX712238_p86 DNA methylase phrog_363 DNA methyltransferase other -1 49178 49855
APQ42093.1 KX712238_p81 hypothetical protein phrog_1155 unknown function unknown function -1 47910 48098
APQ42085.1 KX712238_p73 hypothetical protein phrog_4604 unknown function unknown function -1 44951 45412
APQ42057.1 KX712238_p43 hypothetical protein phrog_383 unknown function unknown function -1 32356 32736
APQ42079.1 KX712238_p67 hypothetical protein phrog_520 unknown function unknown function -1 41935 42228
APQ42087.1 KX712238_p75 hypothetical protein phrog_1584 unknown function unknown function -1 45620 45940
APQ42037.1 KX712238_p22 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 15543 16441
APQ42064.1 KX712238_p50 hypothetical protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 36437 36577
APQ42070.1 KX712238_p57 hypothetical protein phrog_1783 unknown function unknown function -1 39209 39373
APQ42023.1 KX712238_p9 lysin A phrog_317 endolysin lysis 1 4464 5885
APQ42051.1 KX712238_p37 hypothetical protein singleton unknown function unknown function -1 29485 29766
APQ42016.1 KX712238_p2 hypothetical protein phrog_226 minor tail protein tail 1 929 1369
APQ42090.1 KX712238_p78 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 47148 47447
APQ42035.1 KX712238_p21 major tail protein phrog_117 major tail protein tail 1 14670 15521
APQ42039.1 KX712238_p25 minor tail protein phrog_106 minor tail protein tail 1 18957 21014
APQ42017.1 KX712238_p3 hypothetical protein phrog_2830 unknown function unknown function 1 1541 1852
APQ42048.1 KX712238_p34 hypothetical protein phrog_1560 unknown function unknown function 1 27961 28152
APQ42097.1 KX712238_p85 hypothetical protein phrog_4631 unknown function unknown function -1 48557 48874
APQ42060.1 KX712238_p46 hypothetical protein phrog_1781 unknown function unknown function -1 34725 34955
APQ42047.1 KX712238_p33 hypothetical protein phrog_644 unknown function unknown function 1 27631 27951
APQ42078.1 KX712238_p66 hypothetical protein phrog_1705 unknown function unknown function -1 41816 41938
APQ42095.1 KX712238_p83 hypothetical protein phrog_2093 unknown function unknown function -1 48262 48414
APQ42068.1 KX712238_p54 hypothetical protein phrog_8843 unknown function unknown function -1 38130 38351
APQ42061.1 KX712238_p47 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 34986 35477
APQ42083.1 KX712238_p71 hypothetical protein phrog_8167 unknown function unknown function -1 43558 43893
APQ42088.1 KX712238_p76 hypothetical protein phrog_1809 unknown function unknown function -1 45937 46332
APQ42021.1 KX712238_p7 hypothetical protein phrog_1718 tail protein tail 1 3929 4189
APQ42081.1 KX712238_p69 hypothetical protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 42549 42731
APQ42034.1 KX712238_p20 head-to-tail connector protein phrog_123 tail terminator connector 1 14215 14661
APQ42042.1 KX712238_p28 minor tail protein phrog_352 minor tail protein tail 1 23055 23501
APQ42062.1 KX712238_p48 hypothetical protein phrog_499 unknown function unknown function -1 35474 35656
APQ42030.1 KX712238_p16 hypothetical protein phrog_1857 head-tail connector protein connector 1 12544 13005
APQ42033.1 KX712238_p19 head-to-tail connector protein phrog_321 tail completion or Neck1 protein connector 1 13816 14211
APQ42076.1 KX712238_p64 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 40825 41646
APQ42038.1 KX712238_p24 tape measure protein phrog_305 tail length tape measure protein tail 1 16453 18933
APQ42104.1 KX712238_p92 hypothetical protein phrog_828 unknown function unknown function -1 51723 51932
APQ42074.1 KX712238_p62 hypothetical protein phrog_1019 unknown function unknown function -1 40446 40532
APQ42094.1 KX712238_p82 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 48098 48265
APQ42036.1 KX712238_p23 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 15543 16019
APQ42059.1 KX712238_p45 hypothetical protein phrog_542 unknown function unknown function -1 34600 34728
APQ42046.1 KX712238_p32 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 26060 27538
APQ42071.1 KX712238_p58 hypothetical protein phrog_5801 unknown function unknown function -1 39373 39444
APQ42063.1 KX712238_p49 helix-turn-helix DNA binding domain protein phrog_354 sigma-K factor transcription regulation -1 35653 36444
APQ42082.1 KX712238_p70 exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 42758 43558
APQ42022.1 KX712238_p8 hypothetical protein phrog_747 unknown function unknown function 1 4197 4454
APQ42052.1 KX712238_p38 integrase phrog_95 integrase integration and excision 1 29921 31423
APQ42073.1 KX712238_p61 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39965 40459
APQ42029.1 KX712238_p15 major capsid protein phrog_10 major head protein head and packaging 1 11449 12465
APQ42045.1 KX712238_p31 minor tail protein phrog_346 minor tail protein tail 1 24214 26067
APQ42050.1 KX712238_p36 hypothetical protein phrog_411 unknown function unknown function 1 29188 29484
APQ42043.1 KX712238_p29 minor tail protein phrog_981 minor tail protein tail 1 23513 23845