Genomic map of Mycobacterium phage PhancyPhin (KX756439)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX756439
Definition
Mycobacterium phage PhancyPhin, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nclasvirinae; Redivirus; unclassified Redivirus.
DB of origin
NUCCORE
Length
42454
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
69
%GC
66.13
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AOZ64488.1 KX756439_p61 helix-turn-helix DNA binding protein phrog_2149 replication initiation protein DNA, RNA and nucleotide metabolism 1 38264 39142
AOZ64489.1 KX756439_p62 hypothetical protein phrog_3599 unknown function unknown function 1 39139 39741
AOZ64433.1 KX756439_p2 terminase phrog_9 terminase large subunit head and packaging 1 509 2044
AOZ64450.1 KX756439_p19 minor tail protein phrog_732 minor tail protein tail 1 16715 17557
AOZ64434.1 KX756439_p3 hypothetical protein phrog_6750 unknown function unknown function 1 2037 2246
AOZ64496.1 KX756439_p66 hypothetical protein phrog_1694 unknown function unknown function 1 41121 41345
AOZ64499.1 KX756439_p31 hypothetical protein phrog_32886 unknown function unknown function 1 25976 26170
AOZ64478.1 KX756439_p50 hypothetical protein phrog_11506 unknown function unknown function 1 33000 33347
AOZ64443.1 KX756439_p12 head-to-tail connector protein phrog_813 head-tail adaptor connector 1 7388 7807
AOZ64455.1 KX756439_p24 hypothetical protein phrog_1172 unknown function unknown function 1 21644 21820
AOZ64453.1 KX756439_p22 hypothetical protein phrog_6030 unknown function unknown function 1 21025 21264
AOZ64465.1 KX756439_p37 integrase phrog_1 integrase integration and excision -1 28061 29032
AOZ64476.1 KX756439_p48 hypothetical protein phrog_8273 unknown function unknown function 1 32354 32626
AOZ64452.1 KX756439_p21 minor tail protein phrog_416 minor tail protein tail 1 19874 21028
AOZ64444.1 KX756439_p13 major tail protein phrog_476 major tail protein tail 1 7923 8981
AOZ64461.1 KX756439_p33 HicB-like antitoxin phrog_8245 HicB-like antitoxin moron, auxiliary metabolic gene and host takeover -1 26830 27213
AOZ64442.1 KX756439_p11 head-to-tail connector protein phrog_2325 minor tail protein tail 1 7020 7391
AOZ64448.1 KX756439_p17 minor tail protein phrog_106 minor tail protein tail 1 13269 14990
AOZ64492.1 KX756439_p65 hypothetical protein phrog_908 unknown function unknown function 1 40312 40977
AOZ64470.1 KX756439_p42 hypothetical protein phrog_5081 unknown function unknown function 1 30199 30666
AOZ64457.1 KX756439_p26 holin phrog_526 holin lysis 1 23386 23790
AOZ64479.1 KX756439_p51 exonuclease phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 33344 34354
AOZ64454.1 KX756439_p23 hypothetical protein phrog_240 head protein head and packaging 1 21264 21644
AOZ64436.1 KX756439_p5 capsid maturation protease phrog_80 head maturation protease head and packaging 1 3549 4361
AOZ64472.1 KX756439_p44 hypothetical protein phrog_15773 unknown function unknown function 1 31041 31703
AOZ64463.1 KX756439_p35 hypothetical protein phrog_16514 unknown function unknown function -1 27475 27627
AOZ64447.1 KX756439_p16 tape measure protein phrog_2337 tail length tape measure protein tail 1 10169 13267
AOZ64458.1 KX756439_p27 NKF protein phrog_404 minor tail protein tail 1 23787 24296
AOZ64438.1 KX756439_p7 head-to-tail connector protein phrog_7530 unknown function unknown function 1 5753 6004
AOZ64468.1 KX756439_p40 hypothetical protein phrog_3507 unknown function unknown function 1 29769 30080
AOZ64475.1 KX756439_p47 hypothetical protein phrog_36278 unknown function unknown function 1 32229 32357
AOZ64459.1 KX756439_p28 minor tail protein phrog_33457 minor tail protein tail -1 24411 25007
AOZ64495.1 KX756439_p69 HNH endonuclease phrog_1808 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41960 42268
AOZ64445.1 KX756439_p15 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 9081 9611
AOZ64491.1 KX756439_p64 hypothetical protein phrog_14001 unknown function unknown function 1 39983 40315
AOZ64471.1 KX756439_p43 hypothetical protein phrog_15628 unknown function unknown function 1 30730 31044
AOZ64483.1 KX756439_p55 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 36169 36417
AOZ64500.1 KX756439_p60 hypothetical protein phrog_30312 unknown function unknown function 1 38123 38242
AOZ64441.1 KX756439_p10 head-to-tail connector protein phrog_8006 neck protein connector 1 6836 7033
AOZ64480.1 KX756439_p52 ssDNA binding protein phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 34360 35424
AOZ64474.1 KX756439_p46 hypothetical protein phrog_11875 unknown function unknown function 1 32059 32232
AOZ64432.1 KX756439_p1 hypothetical protein phrog_6975 unknown function unknown function 1 63 512
AOZ64485.1 KX756439_p57 hypothetical protein phrog_11218 unknown function unknown function 1 36812 37105
AOZ64462.1 KX756439_p34 hypothetical protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover -1 27210 27425
AOZ64484.1 KX756439_p56 hypothetical protein phrog_6650 unknown function unknown function 1 36414 36815
AOZ64482.1 KX756439_p54 holliday junction resolvase phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 35780 36172
AOZ64486.1 KX756439_p58 hypothetical protein phrog_5505 unknown function unknown function 1 37102 37320
AOZ64498.1 KX756439_p30 hypothetical protein phrog_32282 unknown function unknown function 1 25366 25773
AOZ64437.1 KX756439_p6 major capsid protein phrog_10 major head protein head and packaging 1 4389 5684
AOZ64497.1 KX756439_p29 hypothetical protein phrog_38264 unknown function unknown function 1 25179 25358
AOZ64473.1 KX756439_p45 hypothetical protein phrog_658 unknown function unknown function 1 31700 32062
AOZ64493.1 KX756439_p67 hypothetical protein phrog_1186 unknown function unknown function 1 41342 41740
AOZ64481.1 KX756439_p53 hypothetical protein phrog_4387 unknown function unknown function 1 35421 35783
AOZ64494.1 KX756439_p68 HNH endonuclease phrog_1385 unknown function unknown function 1 41737 41982
AOZ64490.1 KX756439_p63 hypothetical protein phrog_6821 unknown function unknown function 1 39738 39986
AOZ64439.1 KX756439_p8 head-to-tail connector protein phrog_442 head-tail adaptor connector 1 5997 6482
AOZ64440.1 KX756439_p9 head-to-tail connector protein phrog_1531 head closure connector 1 6479 6823
AOZ64449.1 KX756439_p18 minor tail protein phrog_110 minor tail protein tail 1 14990 16699
AOZ64446.1 KX756439_p14 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 9081 9987
AOZ64451.1 KX756439_p20 minor tail protein phrog_3493 minor tail protein tail 1 17557 19863
AOZ64460.1 KX756439_p32 hypothetical protein phrog_31065 unknown function unknown function -1 26259 26816
AOZ64466.1 KX756439_p38 immunity repressor phrog_2328 transcriptional repressor transcription regulation -1 29036 29407
AOZ64487.1 KX756439_p59 hypothetical protein phrog_25663 unknown function unknown function 1 37317 38126
AOZ64467.1 KX756439_p39 excise phrog_4583 transcriptional repressor transcription regulation 1 29530 29772
AOZ64469.1 KX756439_p41 hypothetical protein phrog_10253 unknown function unknown function 1 30077 30202
AOZ64477.1 KX756439_p49 WhiB family transcription factor phrog_1333 unknown function unknown function 1 32623 33003
AOZ64435.1 KX756439_p4 portal protein phrog_12 portal protein head and packaging 1 2263 3552
AOZ64456.1 KX756439_p25 lysin A phrog_1519 endolysin lysis 1 21890 23389
AOZ64464.1 KX756439_p36 HicB-like toxin phrog_1712 unknown function unknown function -1 27677 28015