| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX756439 |
Definition |
Mycobacterium phage PhancyPhin, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nclasvirinae; Redivirus; unclassified Redivirus. |
DB of origin |
NUCCORE |
Length |
42454 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
69 |
%GC |
66.13 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AOZ64488.1 | KX756439_p61 | helix-turn-helix DNA binding protein | phrog_2149 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 38264 | 39142 |
| AOZ64489.1 | KX756439_p62 | hypothetical protein | phrog_3599 | unknown function | unknown function | 1 | 39139 | 39741 |
| AOZ64433.1 | KX756439_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 509 | 2044 |
| AOZ64450.1 | KX756439_p19 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 16715 | 17557 |
| AOZ64434.1 | KX756439_p3 | hypothetical protein | phrog_6750 | unknown function | unknown function | 1 | 2037 | 2246 |
| AOZ64496.1 | KX756439_p66 | hypothetical protein | phrog_1694 | unknown function | unknown function | 1 | 41121 | 41345 |
| AOZ64499.1 | KX756439_p31 | hypothetical protein | phrog_32886 | unknown function | unknown function | 1 | 25976 | 26170 |
| AOZ64478.1 | KX756439_p50 | hypothetical protein | phrog_11506 | unknown function | unknown function | 1 | 33000 | 33347 |
| AOZ64443.1 | KX756439_p12 | head-to-tail connector protein | phrog_813 | head-tail adaptor | connector | 1 | 7388 | 7807 |
| AOZ64455.1 | KX756439_p24 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 21644 | 21820 |
| AOZ64453.1 | KX756439_p22 | hypothetical protein | phrog_6030 | unknown function | unknown function | 1 | 21025 | 21264 |
| AOZ64465.1 | KX756439_p37 | integrase | phrog_1 | integrase | integration and excision | -1 | 28061 | 29032 |
| AOZ64476.1 | KX756439_p48 | hypothetical protein | phrog_8273 | unknown function | unknown function | 1 | 32354 | 32626 |
| AOZ64452.1 | KX756439_p21 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 19874 | 21028 |
| AOZ64444.1 | KX756439_p13 | major tail protein | phrog_476 | major tail protein | tail | 1 | 7923 | 8981 |
| AOZ64461.1 | KX756439_p33 | HicB-like antitoxin | phrog_8245 | HicB-like antitoxin | moron, auxiliary metabolic gene and host takeover | -1 | 26830 | 27213 |
| AOZ64442.1 | KX756439_p11 | head-to-tail connector protein | phrog_2325 | minor tail protein | tail | 1 | 7020 | 7391 |
| AOZ64448.1 | KX756439_p17 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 13269 | 14990 |
| AOZ64492.1 | KX756439_p65 | hypothetical protein | phrog_908 | unknown function | unknown function | 1 | 40312 | 40977 |
| AOZ64470.1 | KX756439_p42 | hypothetical protein | phrog_5081 | unknown function | unknown function | 1 | 30199 | 30666 |
| AOZ64457.1 | KX756439_p26 | holin | phrog_526 | holin | lysis | 1 | 23386 | 23790 |
| AOZ64479.1 | KX756439_p51 | exonuclease | phrog_434 | RecE-like recombination exonuclease | DNA, RNA and nucleotide metabolism | 1 | 33344 | 34354 |
| AOZ64454.1 | KX756439_p23 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 21264 | 21644 |
| AOZ64436.1 | KX756439_p5 | capsid maturation protease | phrog_80 | head maturation protease | head and packaging | 1 | 3549 | 4361 |
| AOZ64472.1 | KX756439_p44 | hypothetical protein | phrog_15773 | unknown function | unknown function | 1 | 31041 | 31703 |
| AOZ64463.1 | KX756439_p35 | hypothetical protein | phrog_16514 | unknown function | unknown function | -1 | 27475 | 27627 |
| AOZ64447.1 | KX756439_p16 | tape measure protein | phrog_2337 | tail length tape measure protein | tail | 1 | 10169 | 13267 |
| AOZ64458.1 | KX756439_p27 | NKF protein | phrog_404 | minor tail protein | tail | 1 | 23787 | 24296 |
| AOZ64438.1 | KX756439_p7 | head-to-tail connector protein | phrog_7530 | unknown function | unknown function | 1 | 5753 | 6004 |
| AOZ64468.1 | KX756439_p40 | hypothetical protein | phrog_3507 | unknown function | unknown function | 1 | 29769 | 30080 |
| AOZ64475.1 | KX756439_p47 | hypothetical protein | phrog_36278 | unknown function | unknown function | 1 | 32229 | 32357 |
| AOZ64459.1 | KX756439_p28 | minor tail protein | phrog_33457 | minor tail protein | tail | -1 | 24411 | 25007 |
| AOZ64495.1 | KX756439_p69 | HNH endonuclease | phrog_1808 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 41960 | 42268 |
| AOZ64445.1 | KX756439_p15 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 9081 | 9611 |
| AOZ64491.1 | KX756439_p64 | hypothetical protein | phrog_14001 | unknown function | unknown function | 1 | 39983 | 40315 |
| AOZ64471.1 | KX756439_p43 | hypothetical protein | phrog_15628 | unknown function | unknown function | 1 | 30730 | 31044 |
| AOZ64483.1 | KX756439_p55 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 36169 | 36417 |
| AOZ64500.1 | KX756439_p60 | hypothetical protein | phrog_30312 | unknown function | unknown function | 1 | 38123 | 38242 |
| AOZ64441.1 | KX756439_p10 | head-to-tail connector protein | phrog_8006 | neck protein | connector | 1 | 6836 | 7033 |
| AOZ64480.1 | KX756439_p52 | ssDNA binding protein | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 34360 | 35424 |
| AOZ64474.1 | KX756439_p46 | hypothetical protein | phrog_11875 | unknown function | unknown function | 1 | 32059 | 32232 |
| AOZ64432.1 | KX756439_p1 | hypothetical protein | phrog_6975 | unknown function | unknown function | 1 | 63 | 512 |
| AOZ64485.1 | KX756439_p57 | hypothetical protein | phrog_11218 | unknown function | unknown function | 1 | 36812 | 37105 |
| AOZ64462.1 | KX756439_p34 | hypothetical protein | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | -1 | 27210 | 27425 |
| AOZ64484.1 | KX756439_p56 | hypothetical protein | phrog_6650 | unknown function | unknown function | 1 | 36414 | 36815 |
| AOZ64482.1 | KX756439_p54 | holliday junction resolvase | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 35780 | 36172 |
| AOZ64486.1 | KX756439_p58 | hypothetical protein | phrog_5505 | unknown function | unknown function | 1 | 37102 | 37320 |
| AOZ64498.1 | KX756439_p30 | hypothetical protein | phrog_32282 | unknown function | unknown function | 1 | 25366 | 25773 |
| AOZ64437.1 | KX756439_p6 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4389 | 5684 |
| AOZ64497.1 | KX756439_p29 | hypothetical protein | phrog_38264 | unknown function | unknown function | 1 | 25179 | 25358 |
| AOZ64473.1 | KX756439_p45 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 31700 | 32062 |
| AOZ64493.1 | KX756439_p67 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 41342 | 41740 |
| AOZ64481.1 | KX756439_p53 | hypothetical protein | phrog_4387 | unknown function | unknown function | 1 | 35421 | 35783 |
| AOZ64494.1 | KX756439_p68 | HNH endonuclease | phrog_1385 | unknown function | unknown function | 1 | 41737 | 41982 |
| AOZ64490.1 | KX756439_p63 | hypothetical protein | phrog_6821 | unknown function | unknown function | 1 | 39738 | 39986 |
| AOZ64439.1 | KX756439_p8 | head-to-tail connector protein | phrog_442 | head-tail adaptor | connector | 1 | 5997 | 6482 |
| AOZ64440.1 | KX756439_p9 | head-to-tail connector protein | phrog_1531 | head closure | connector | 1 | 6479 | 6823 |
| AOZ64449.1 | KX756439_p18 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 14990 | 16699 |
| AOZ64446.1 | KX756439_p14 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 9081 | 9987 |
| AOZ64451.1 | KX756439_p20 | minor tail protein | phrog_3493 | minor tail protein | tail | 1 | 17557 | 19863 |
| AOZ64460.1 | KX756439_p32 | hypothetical protein | phrog_31065 | unknown function | unknown function | -1 | 26259 | 26816 |
| AOZ64466.1 | KX756439_p38 | immunity repressor | phrog_2328 | transcriptional repressor | transcription regulation | -1 | 29036 | 29407 |
| AOZ64487.1 | KX756439_p59 | hypothetical protein | phrog_25663 | unknown function | unknown function | 1 | 37317 | 38126 |
| AOZ64467.1 | KX756439_p39 | excise | phrog_4583 | transcriptional repressor | transcription regulation | 1 | 29530 | 29772 |
| AOZ64469.1 | KX756439_p41 | hypothetical protein | phrog_10253 | unknown function | unknown function | 1 | 30077 | 30202 |
| AOZ64477.1 | KX756439_p49 | WhiB family transcription factor | phrog_1333 | unknown function | unknown function | 1 | 32623 | 33003 |
| AOZ64435.1 | KX756439_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2263 | 3552 |
| AOZ64456.1 | KX756439_p25 | lysin A | phrog_1519 | endolysin | lysis | 1 | 21890 | 23389 |
| AOZ64464.1 | KX756439_p36 | HicB-like toxin | phrog_1712 | unknown function | unknown function | -1 | 27677 | 28015 |