Genomic map of Mycobacterium phage Jaan (KX758539)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX758539
Definition
Mycobacterium phage Jaan, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
52462
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
90
%GC
63.15
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APC43189.1 KX758539_p40 hypothetical protein phrog_383 unknown function unknown function -1 29843 30232
APC43210.1 KX758539_p62 hypothetical protein phrog_2187 unknown function unknown function -1 40859 40984
APC43164.1 KX758539_p15 portal protein phrog_104 portal protein head and packaging 1 11325 12779
APC43188.1 KX758539_p39 excise phrog_66 excisionase and transcriptional regulator integration and excision -1 29540 29710
APC43240.1 KX758539_p59 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 39887 40291
APC43193.1 KX758539_p44 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 30959 32749
APC43186.1 KX758539_p37 hypothetical protein phrog_733 excisionase integration and excision 1 28850 29293
APC43226.1 KX758539_p78 hypothetical protein phrog_8086 unknown function unknown function -1 47676 47882
APC43180.1 KX758539_p31 minor tail protein phrog_352 minor tail protein tail 1 23923 24369
APC43228.1 KX758539_p80 hypothetical protein phrog_2090 unknown function unknown function -1 48208 48366
APC43214.1 KX758539_p66 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 42604 43407
APC43222.1 KX758539_p74 hypothetical protein phrog_1173 unknown function unknown function -1 46900 47076
APC43160.1 KX758539_p11 lysin A phrog_317 endolysin lysis 1 6539 8053
APC43159.1 KX758539_p10 hypothetical protein phrog_2653 unknown function unknown function 1 6291 6539
APC43199.1 KX758539_p50 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 34998 37028
APC43220.1 KX758539_p72 hypothetical protein phrog_1562 unknown function unknown function -1 45688 46110
APC43234.1 KX758539_p86 hypothetical protein phrog_586 unknown function unknown function -1 50016 50396
APC43181.1 KX758539_p32 minor tail protein phrog_1298 minor tail protein tail 1 24366 24797
APC43219.1 KX758539_p71 exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 44879 45691
APC43231.1 KX758539_p83 hypothetical protein phrog_2464 unknown function unknown function -1 48984 49235
APC43217.1 KX758539_p69 antirepressor phrog_130 anti-repressor Ant transcription regulation -1 43772 44554
APC43152.1 KX758539_p2 hypothetical protein phrog_4415 peptidase other 1 1059 1895
APC43165.1 KX758539_p16 capsid maturation protease phrog_193 head maturation protease head and packaging 1 12950 13657
APC43176.1 KX758539_p26 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 17899 18707
APC43192.1 KX758539_p43 hypothetical protein phrog_896 unknown function unknown function -1 30707 30928
APC43175.1 KX758539_p27 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 17899 18297
APC43184.1 KX758539_p35 hypothetical protein phrog_1712 unknown function unknown function -1 27060 27278
APC43154.1 KX758539_p5 hypothetical protein phrog_226 minor tail protein tail 1 2449 2919
APC43179.1 KX758539_p30 minor tail protein phrog_110 minor tail protein tail 1 22136 23908
APC43155.1 KX758539_p6 minor tail protein phrog_1260 minor tail protein tail 1 3006 3968
APC43182.1 KX758539_p33 minor tail protein phrog_726 unknown function unknown function 1 24787 25221
APC43209.1 KX758539_p61 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 40423 40899
APC43216.1 KX758539_p68 hypothetical protein phrog_520 unknown function unknown function -1 43528 43788
APC43204.1 KX758539_p55 metallophosphoesterase phrog_221 metallo-phosphoesterase other -1 38266 39036
APC43153.1 KX758539_p3 hypothetical protein phrog_4347 unknown function unknown function 1 1892 2113
APC43178.1 KX758539_p29 minor tail protein phrog_106 minor tail protein tail 1 21123 22139
APC43169.1 KX758539_p20 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 15462 15839
APC43151.1 KX758539_p1 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 388 1155
APC43197.1 KX758539_p48 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 33647 34372
APC43185.1 KX758539_p36 integrase phrog_1 integrase integration and excision -1 27326 28459
APC43223.1 KX758539_p75 hypothetical protein phrog_7865 unknown function unknown function -1 47080 47271
APC43235.1 KX758539_p87 hypothetical protein phrog_1946 unknown function unknown function -1 50491 50691
APC43239.1 KX758539_p4 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2110 2406
APC43167.1 KX758539_p18 major capsid protein phrog_10 major head protein head and packaging 1 14251 15207
APC43205.1 KX758539_p56 hypothetical protein phrog_474 phosphofructokinase other -1 39033 39353
APC43203.1 KX758539_p54 hypothetical protein phrog_2436 unknown function unknown function -1 38111 38263
APC43183.1 KX758539_p34 hypothetical protein phrog_737 minor tail protein tail 1 25218 26993
APC43172.1 KX758539_p23 head-to-tail connector protein phrog_321 tail completion or Neck1 protein connector 1 16395 16751
APC43194.1 KX758539_p45 hypothetical protein phrog_4326 unknown function unknown function -1 32757 33047
APC43187.1 KX758539_p38 hypothetical protein phrog_4193 unknown function unknown function -1 29399 29536
APC43163.1 KX758539_p14 terminase phrog_9 terminase large subunit head and packaging 1 9550 11328
APC43229.1 KX758539_p81 hypothetical protein phrog_1006 unknown function unknown function -1 48363 48833
APC43238.1 KX758539_p90 hypothetical protein phrog_1676 unknown function unknown function -1 51071 51391
APC43198.1 KX758539_p49 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 34435 34986
APC43190.1 KX758539_p41 hypothetical protein phrog_5282 unknown function unknown function -1 30229 30480
APC43236.1 KX758539_p88 hypothetical protein phrog_519 unknown function unknown function -1 50691 50876
APC43227.1 KX758539_p79 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 47903 48211
APC43201.1 KX758539_p52 hypothetical protein phrog_499 unknown function unknown function -1 37222 37395
APC43174.1 KX758539_p25 major tail subunit phrog_117 major tail protein tail 1 17199 17789
APC43224.1 KX758539_p76 hypothetical protein phrog_3963 unknown function unknown function -1 47271 47534
APC43212.1 KX758539_p64 hypothetical protein phrog_397 unknown function unknown function -1 41820 42053
APC43225.1 KX758539_p77 hypothetical protein phrog_865 HNH endonuclease DNA, RNA and nucleotide metabolism -1 47534 47674
APC43157.1 KX758539_p8 hypothetical protein phrog_356 minor tail protein tail 1 5072 5734
APC43196.1 KX758539_p47 hypothetical protein phrog_690 unknown function unknown function -1 33442 33645
APC43213.1 KX758539_p65 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision -1 42188 42574
APC43162.1 KX758539_p13 lysin B phrog_102 endolysin lysis 1 8541 9527
APC43200.1 KX758539_p51 hypothetical protein phrog_2046 unknown function unknown function -1 37028 37225
APC43171.1 KX758539_p22 head-to-tail connector protein phrog_320 head closure Hc1 connector 1 16027 16395
APC43156.1 KX758539_p7 hypothetical protein phrog_819 tail protein tail 1 3968 5068
APC43208.1 KX758539_p60 hypothetical protein phrog_1370 unknown function unknown function -1 40269 40403
APC43161.1 KX758539_p12 holin phrog_526 holin lysis 1 8050 8544
APC43218.1 KX758539_p70 hypothetical protein phrog_642 unknown function unknown function -1 44594 44833
APC43237.1 KX758539_p89 hypothetical protein phrog_25126 unknown function unknown function -1 50878 51045
APC43221.1 KX758539_p73 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 46139 46696
APC43211.1 KX758539_p63 esterase phrog_789 esterase/lipase other -1 40981 41832
APC43177.1 KX758539_p28 tape measure protein phrog_305 tail length tape measure protein tail 1 18718 21096
APC43195.1 KX758539_p46 HTH DNA binding domain protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 33047 33445
APC43168.1 KX758539_p19 hypothetical protein phrog_748 head-tail connector protein connector 1 15276 15458
APC43215.1 KX758539_p67 hypothetical protein phrog_2731 unknown function unknown function -1 43418 43531
APC43202.1 KX758539_p53 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 37392 38114
APC43206.1 KX758539_p57 hypothetical protein phrog_2264 unknown function unknown function -1 39350 39427
APC43233.1 KX758539_p85 DNA methylase phrog_363 DNA methyltransferase other -1 49297 49980
APC43158.1 KX758539_p9 hypothetical protein phrog_1540 unknown function unknown function 1 5713 6105
APC43170.1 KX758539_p21 head-to-tail connector protein phrog_830 head-tail connector protein connector 1 15836 16030
APC43232.1 KX758539_p84 hypothetical protein phrog_9713 unknown function unknown function -1 49232 49300
APC43207.1 KX758539_p58 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 39427 39966
APC43191.1 KX758539_p42 hypothetical protein phrog_3283 unknown function unknown function -1 30480 30707
APC43166.1 KX758539_p17 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 13710 14219
APC43173.1 KX758539_p24 head-to-tail connector protein phrog_123 tail terminator connector 1 16760 17182
APC43230.1 KX758539_p82 hypothetical protein phrog_855 unknown function unknown function -1 48830 48967