| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX808131 |
Definition |
Mycobacterium phage SuperGrey, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus. |
DB of origin |
NUCCORE |
Length |
59346 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
103 |
%GC |
61.72 |
Number of singletons |
1 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APC43528.1 | KX808131_p31 | lysin A | phrog_700 | endolysin | lysis | 1 | 27204 | 28496 |
| APC43599.1 | KX808131_p40 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31650 | 31793 |
| APC43525.1 | KX808131_p28 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 26610 | 26750 |
| APC43516.1 | KX808131_p19 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 18074 | 20611 |
| APC43556.1 | KX808131_p62 | hypothetical protein | phrog_2096 | unknown function | unknown function | 1 | 41554 | 42054 |
| APC43571.1 | KX808131_p79 | hypothetical protein | phrog_1546 | unknown function | unknown function | 1 | 50245 | 50601 |
| APC43533.1 | KX808131_p36 | DNA polymerase III subunit | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 30352 | 31173 |
| APC43543.1 | KX808131_p48 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 36177 | 37181 |
| APC43562.1 | KX808131_p69 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44472 | 44828 |
| APC43512.1 | KX808131_p15 | tape measure protein | phrog_1942 | tail length tape measure protein | tail | 1 | 10038 | 13685 |
| APC43535.1 | KX808131_p39 | hypothetical protein | phrog_1839 | unknown function | unknown function | 1 | 31471 | 31563 |
| APC43547.1 | KX808131_p52 | hypothetical protein | phrog_780 | unknown function | unknown function | 1 | 37962 | 38207 |
| APC43589.1 | KX808131_p99 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 56197 | 56439 |
| APC43565.1 | KX808131_p72 | hypothetical protein | phrog_2070 | unknown function | unknown function | 1 | 47487 | 47642 |
| APC43590.1 | KX808131_p100 | glycosyltransferase | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 56436 | 58046 |
| APC43538.1 | KX808131_p43 | RelE-like toxin | phrog_1213 | RelE-like toxin | moron, auxiliary metabolic gene and host takeover | 1 | 33884 | 34177 |
| APC43499.1 | KX808131_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 587 | 2224 |
| APC43542.1 | KX808131_p47 | helix-turn-helix DNA binding protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 35887 | 36120 |
| APC43561.1 | KX808131_p68 | DNA recombinase | phrog_1366 | unknown function | unknown function | 1 | 43498 | 44475 |
| APC43600.1 | KX808131_p54 | hypothetical protein | phrog_17676 | unknown function | unknown function | 1 | 38639 | 38788 |
| APC43539.1 | KX808131_p44 | RelB-like antitoxin | phrog_2268 | antitoxin from a toxin-antitoxin system | moron, auxiliary metabolic gene and host takeover | 1 | 34174 | 34422 |
| APC43586.1 | KX808131_p96 | hypothetical protein | phrog_1869 | unknown function | unknown function | 1 | 55423 | 55587 |
| APC43537.1 | KX808131_p42 | integrase | phrog_1 | integrase | integration and excision | 1 | 32615 | 33742 |
| APC43510.1 | KX808131_p12 | tail assembly chaperone protein | phrog_978 | tail assembly chaperone | tail | 1 | 8545 | 9481 |
| APC43549.1 | KX808131_p55 | hypothetical protein | phrog_1816 | unknown function | unknown function | 1 | 38785 | 38976 |
| APC43506.1 | KX808131_p9 | head-to-tail connector protein | phrog_1929 | head-tail connector protein | connector | 1 | 6781 | 7107 |
| APC43554.1 | KX808131_p60 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 40809 | 41156 |
| APC43570.1 | KX808131_p78 | hypothetical protein | phrog_1943 | unknown function | unknown function | 1 | 50054 | 50248 |
| APC43575.1 | KX808131_p83 | hypothetical protein | phrog_722 | unknown function | unknown function | 1 | 51298 | 51810 |
| APC43566.1 | KX808131_p73 | hypothetical protein | phrog_424 | phosphoadenosine phosphosulfate reductase | moron, auxiliary metabolic gene and host takeover | 1 | 47639 | 48505 |
| APC43523.1 | KX808131_p26 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 26161 | 26457 |
| APC43529.1 | KX808131_p32 | lysin B | phrog_102 | endolysin | lysis | 1 | 28493 | 29494 |
| APC43530.1 | KX808131_p33 | holin | phrog_443 | holin | lysis | 1 | 29503 | 29736 |
| APC43564.1 | KX808131_p71 | hypothetical protein | phrog_2704 | unknown function | unknown function | 1 | 47341 | 47490 |
| APC43595.1 | KX808131_p64 | hypothetical protein | phrog_2078 | unknown function | unknown function | 1 | 42413 | 42571 |
| APC43568.1 | KX808131_p76 | hypothetical protein | phrog_2080 | unknown function | unknown function | 1 | 49600 | 49863 |
| APC43500.1 | KX808131_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2255 | 3625 |
| APC43550.1 | KX808131_p56 | hypothetical protein | phrog_3381 | unknown function | unknown function | 1 | 38973 | 39149 |
| APC43574.1 | KX808131_p82 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 51027 | 51305 |
| APC43598.1 | KX808131_p91 | hypothetical protein | phrog_4126 | unknown function | unknown function | 1 | 53336 | 53455 |
| APC43577.1 | KX808131_p86 | hypothetical protein | phrog_1901 | unknown function | unknown function | 1 | 52315 | 52506 |
| APC43501.1 | KX808131_p4 | capsid maturation protease | phrog_1522 | head maturation protease | head and packaging | 1 | 3612 | 4367 |
| APC43551.1 | KX808131_p57 | hypothetical protein | phrog_1797 | unknown function | unknown function | 1 | 39146 | 39556 |
| APC43552.1 | KX808131_p58 | hypothetical protein | phrog_3416 | unknown function | unknown function | 1 | 39638 | 40450 |
| APC43534.1 | KX808131_p38 | hypothetical protein | phrog_1791 | unknown function | unknown function | 1 | 31257 | 31478 |
| APC43584.1 | KX808131_p94 | hypothetical protein | phrog_908 | unknown function | unknown function | 1 | 53947 | 54633 |
| APC43504.1 | KX808131_p7 | head-to-tail connector protein | phrog_2377 | head-tail adaptor Ad1 | connector | 1 | 5883 | 6449 |
| APC43580.1 | KX808131_p89 | hypothetical protein | phrog_1545 | unknown function | unknown function | 1 | 53029 | 53169 |
| APC43557.1 | KX808131_p63 | helix-turn-helix DNA binding protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 42051 | 42416 |
| APC43582.1 | KX808131_p92 | hypothetical protein | phrog_2278 | unknown function | unknown function | 1 | 53452 | 53688 |
| APC43519.1 | KX808131_p22 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 23675 | 24016 |
| APC43576.1 | KX808131_p84 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 51807 | 52193 |
| APC43502.1 | KX808131_p5 | scaffolding protein | phrog_2592 | head scaffolding protein | head and packaging | 1 | 4450 | 5043 |
| APC43588.1 | KX808131_p98 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 55787 | 56200 |
| APC43546.1 | KX808131_p51 | hypothetical protein | phrog_18910 | unknown function | unknown function | 1 | 37739 | 37969 |
| APC43521.1 | KX808131_p24 | hypothetical protein | phrog_2012 | minor tail protein | tail | 1 | 24307 | 24945 |
| APC43513.1 | KX808131_p16 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 13686 | 15395 |
| APC43498.1 | KX808131_p1 | terminase small subunit | phrog_226 | minor tail protein | tail | 1 | 109 | 564 |
| APC43517.1 | KX808131_p20 | D-ala-D-ala-carboxypeptidase | phrog_382 | minor tail protein with lysin activity | tail | 1 | 20608 | 22494 |
| APC43511.1 | KX808131_p14 | HNH endonuclease | phrog_3593 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 9478 | 10038 |
| APC43592.1 | KX808131_p102 | glycosyltransferase | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 58252 | 58875 |
| APC43545.1 | KX808131_p50 | helix-turn-helix DNA binding protein | phrog_1840 | excisionase | integration and excision | 1 | 37482 | 37742 |
| APC43524.1 | KX808131_p27 | hypothetical protein | phrog_932 | unknown function | unknown function | 1 | 26464 | 26613 |
| APC43518.1 | KX808131_p21 | minor tail protein | phrog_2106 | minor tail protein | tail | 1 | 22491 | 23657 |
| APC43579.1 | KX808131_p88 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 52853 | 53032 |
| APC43591.1 | KX808131_p101 | hypothetical protein | phrog_1693 | unknown function | unknown function | 1 | 58043 | 58255 |
| APC43569.1 | KX808131_p77 | hypothetical protein | phrog_7196 | unknown function | unknown function | 1 | 49860 | 50057 |
| APC43567.1 | KX808131_p75 | hypothetical protein | phrog_3171 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 48629 | 49603 |
| APC43555.1 | KX808131_p61 | WhiB family transcription factor | phrog_1333 | unknown function | unknown function | 1 | 41156 | 41557 |
| APC43558.1 | KX808131_p65 | hypothetical protein | phrog_1834 | unknown function | unknown function | 1 | 42568 | 42798 |
| APC43578.1 | KX808131_p87 | hypothetical protein | phrog_12283 | unknown function | unknown function | 1 | 52503 | 52856 |
| APC43572.1 | KX808131_p80 | hypothetical protein | phrog_2591 | unknown function | unknown function | 1 | 50594 | 50779 |
| APC43585.1 | KX808131_p95 | GIY-YIG endonuclease | phrog_8604 | unknown function | unknown function | 1 | 54630 | 55232 |
| APC43507.1 | KX808131_p10 | head-to-tail connector protein | phrog_813 | head-tail adaptor | connector | 1 | 7097 | 7504 |
| APC43536.1 | KX808131_p41 | HNH endonuclease | phrog_3593 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 31842 | 32615 |
| APC43573.1 | KX808131_p81 | hypothetical protein | phrog_3472 | unknown function | unknown function | 1 | 50776 | 51030 |
| APC43553.1 | KX808131_p59 | hypothetical protein | phrog_1849 | unknown function | unknown function | 1 | 40531 | 40812 |
| APC43587.1 | KX808131_p97 | hypothetical protein | phrog_1694 | unknown function | unknown function | 1 | 55593 | 55790 |
| APC43514.1 | KX808131_p17 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 15480 | 17189 |
| APC43581.1 | KX808131_p90 | hypothetical protein | phrog_5186 | unknown function | unknown function | 1 | 53166 | 53339 |
| APC43563.1 | KX808131_p70 | DNA methylase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 44825 | 47344 |
| APC43508.1 | KX808131_p11 | major tail protein | phrog_476 | major tail protein | tail | 1 | 7599 | 8408 |
| APC43526.1 | KX808131_p29 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 26816 | 27037 |
| APC43541.1 | KX808131_p46 | immunity repressor | phrog_3949 | transcriptional repressor | transcription regulation | -1 | 35151 | 35564 |
| APC43527.1 | KX808131_p30 | hypothetical protein | phrog_5492 | unknown function | unknown function | 1 | 27034 | 27207 |
| APC43509.1 | KX808131_p13 | tail assemply chaperone protein | phrog_621 | tail assembly chaperone | tail | 1 | 8545 | 9096 |
| APC43593.1 | KX808131_p103 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 58875 | 59201 |
| APC43583.1 | KX808131_p93 | hypothetical protein | phrog_2247 | unknown function | unknown function | 1 | 53681 | 53950 |
| APC43560.1 | KX808131_p67 | hypothetical protein | phrog_5168 | unknown function | unknown function | 1 | 43037 | 43501 |
| APC43559.1 | KX808131_p66 | hypothetical protein | phrog_2632 | unknown function | unknown function | 1 | 42795 | 43040 |
| APC43594.1 | KX808131_p37 | hypothetical protein | phrog_8186 | unknown function | unknown function | 1 | 31175 | 31270 |
| APC43515.1 | KX808131_p18 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 17226 | 18077 |
| APC43597.1 | KX808131_p85 | hypothetical protein | phrog_4152 | unknown function | unknown function | 1 | 52190 | 52318 |
| APC43531.1 | KX808131_p34 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 29733 | 30107 |
| APC43505.1 | KX808131_p8 | head-to-tail connector protein | phrog_763 | head-tail adaptor | connector | 1 | 6446 | 6778 |
| APC43520.1 | KX808131_p23 | hypothetical protein | phrog_2005 | minor tail protein | tail | 1 | 24039 | 24293 |
| APC43532.1 | KX808131_p35 | hypothetical protein | phrog_2004 | unknown function | unknown function | 1 | 30132 | 30365 |
| APC43503.1 | KX808131_p6 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 5062 | 5883 |
| APC43540.1 | KX808131_p45 | hypothetical protein | phrog_1948 | unknown function | unknown function | -1 | 34433 | 34885 |
| APC43548.1 | KX808131_p53 | hypothetical protein | phrog_2021 | unknown function | unknown function | 1 | 38208 | 38642 |
| APC43522.1 | KX808131_p25 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 24942 | 26156 |
| APC43544.1 | KX808131_p49 | hypothetical protein | phrog_2025 | unknown function | unknown function | 1 | 37178 | 37393 |
| APC43596.1 | KX808131_p74 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 48498 | 48629 |