Genomic map of Methylophilaceae phage P19250A (KX815270)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX815270
Definition
Methylophilaceae phage P19250A, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
38749
Host Name
Methylophilaceae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
58
%GC
35.45
Number of singletons
41
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APC43900.1 KX815270_p15 tail length tape-measure protein 1 singleton unknown function unknown function 1 10718 12502
APC43892.1 KX815270_p7 hypothetical protein singleton unknown function unknown function 1 7128 7793
APC43942.1 KX815270_p57 hypothetical protein phrog_894 endolysin lysis 1 37691 38125
APC43931.1 KX815270_p46 hypothetical protein singleton unknown function unknown function 1 34040 34240
APC43904.1 KX815270_p19 host specificity protein J singleton unknown function unknown function 1 14243 17542
APC43905.1 KX815270_p20 tail fiber protein singleton unknown function unknown function 1 17552 18022
APC43935.1 KX815270_p50 hypothetical protein singleton unknown function unknown function 1 34896 35294
APC43915.1 KX815270_p30 hypothetical protein singleton unknown function unknown function -1 28241 28468
APC43930.1 KX815270_p45 hypothetical protein singleton unknown function unknown function 1 33887 34030
APC43914.1 KX815270_p29 hypothetical protein singleton unknown function unknown function 1 27742 27957
APC43896.1 KX815270_p11 hypothetical protein singleton unknown function unknown function 1 9113 9340
APC43910.1 KX815270_p25 hypothetical protein singleton unknown function unknown function 1 25632 26600
APC43901.1 KX815270_p16 hypothetical protein singleton unknown function unknown function 1 12506 13189
APC43907.1 KX815270_p22 hypothetical protein singleton unknown function unknown function 1 20909 21388
APC43937.1 KX815270_p52 hypothetical protein phrog_1588 unknown function unknown function 1 35802 36092
APC43941.1 KX815270_p56 hypothetical protein phrog_3427 holin lysis 1 37302 37694
APC43919.1 KX815270_p34 recombinase phrog_2324 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 29705 30247
APC43888.1 KX815270_p3 portal protein phrog_12 portal protein head and packaging 1 2275 3684
APC43895.1 KX815270_p10 hypothetical protein singleton unknown function unknown function 1 8597 9094
APC43887.1 KX815270_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 607 2265
APC43933.1 KX815270_p48 hypothetical protein singleton unknown function unknown function 1 34428 34571
APC43903.1 KX815270_p18 hypothetical protein singleton unknown function unknown function 1 13818 14243
APC43902.1 KX815270_p17 hypothetical protein phrog_2048 tail protein tail 1 13189 13821
APC43893.1 KX815270_p8 hypothetical protein singleton unknown function unknown function 1 7794 8138
APC43934.1 KX815270_p49 hypothetical protein singleton unknown function unknown function 1 34583 34873
APC43913.1 KX815270_p28 hypothetical protein phrog_3322 endonuclease DNA, RNA and nucleotide metabolism 1 27357 27749
APC43898.1 KX815270_p13 hypothetical protein singleton unknown function unknown function 1 9904 10374
APC43894.1 KX815270_p9 hypothetical protein singleton unknown function unknown function 1 8140 8562
APC43906.1 KX815270_p21 PE family protein singleton unknown function unknown function 1 18045 20822
APC43932.1 KX815270_p47 hypothetical protein singleton unknown function unknown function 1 34252 34431
APC43912.1 KX815270_p27 hypothetical protein singleton unknown function unknown function 1 27227 27388
APC43924.1 KX815270_p39 hypothetical protein phrog_824 unknown function unknown function 1 31756 32046
APC43936.1 KX815270_p51 hypothetical protein singleton unknown function unknown function 1 35570 35809
APC43925.1 KX815270_p40 hypothetical protein phrog_9327 primosomal protein DNA, RNA and nucleotide metabolism 1 32098 32763
APC43890.1 KX815270_p5 gene transfer agent capsid protein phrog_10 major head protein head and packaging 1 4600 5988
APC43899.1 KX815270_p14 hypothetical protein singleton unknown function unknown function 1 10407 10715
APC43921.1 KX815270_p36 hypothetical protein singleton unknown function unknown function -1 30666 31016
APC43908.1 KX815270_p23 tail length tape-measure protein singleton unknown function unknown function 1 21390 24995
APC43927.1 KX815270_p42 hypothetical protein singleton unknown function unknown function 1 33146 33415
APC43938.1 KX815270_p53 hypothetical protein phrog_858 starvation-inducible transcriptional regulator transcription regulation 1 36156 36560
APC43889.1 KX815270_p4 hypothetical protein singleton unknown function unknown function 1 3787 4596
APC43918.1 KX815270_p33 hypothetical protein singleton unknown function unknown function -1 29535 29708
APC43940.1 KX815270_p55 hypothetical protein singleton unknown function unknown function 1 36981 37301
APC43909.1 KX815270_p24 hypothetical protein singleton unknown function unknown function 1 25010 25639
APC43939.1 KX815270_p54 holin phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 36560 36997
APC43922.1 KX815270_p37 hypothetical protein singleton unknown function unknown function -1 31145 31399
APC43917.1 KX815270_p32 hypothetical protein singleton unknown function unknown function -1 29101 29538
APC43891.1 KX815270_p6 hypothetical protein singleton unknown function unknown function 1 6066 7124
APC43929.1 KX815270_p44 hypothetical protein singleton unknown function unknown function 1 33630 33848
APC43920.1 KX815270_p35 hypothetical protein singleton unknown function unknown function -1 30272 30676
APC43897.1 KX815270_p12 hypothetical protein singleton unknown function unknown function 1 9340 9894
APC43911.1 KX815270_p26 hypothetical protein singleton unknown function unknown function 1 26597 27040
APC43916.1 KX815270_p31 diguanylate cyclase/phosphodiesterase phrog_149 exonuclease DNA, RNA and nucleotide metabolism -1 28452 29108
APC43943.1 KX815270_p58 hypothetical protein phrog_474 phosphofructokinase other 1 38177 38497
APC43923.1 KX815270_p38 hypothetical protein singleton unknown function unknown function -1 31404 31595
APC43926.1 KX815270_p41 ell wall hydrolase phrog_938 endolysin lysis 1 32772 33128
APC43886.1 KX815270_p1 hypothetical protein phrog_83 terminase small subunit head and packaging 1 38 511
APC43928.1 KX815270_p43 hypothetical protein singleton unknown function unknown function 1 33405 33623