Genomic map of Streptomyces phage Joe (KX815338)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX815338
Definition
Streptomyces phage Joe, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Camvirus; unclassified Camvirus.
DB of origin
NUCCORE
Length
48941
Host Name
Streptomyces coelicolor
Host domain
Bacteria
Is prophage?
undef
Number of proteins
81
%GC
65.47
Number of singletons
6
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APC43252.1 KX815338_p12 protein of an unannotated phage phrog_283 major head protein head and packaging 1 7324 8403
APC43255.1 KX815338_p15 protein of an unannotated phage phrog_321 tail completion or Neck1 protein connector 1 9268 9669
APC43293.1 KX815338_p53 protein of an unannotated phage phrog_95 integrase integration and excision 1 36624 38213
APC43257.1 KX815338_p17 protein of an unannotated phage phrog_117 major tail protein tail 1 10189 10932
APC43250.1 KX815338_p10 protein of an unannotated phage phrog_193 head maturation protease head and packaging 1 5612 6706
APC43310.1 KX815338_p70 protein of an unannotated phage phrog_4867 unknown function unknown function -1 44187 44552
APC43245.1 KX815338_p5 protein of an unannotated phage phrog_3555 unknown function unknown function 1 1446 1676
APC43286.1 KX815338_p46 protein of an unannotated phage phrog_3512 sigma factor transcription regulation 1 32170 32565
APC43241.1 KX815338_p1 protein of an unannotated phage phrog_4207 unknown function unknown function -1 125 331
APC43267.1 KX815338_p27 protein of an unannotated phage phrog_988 tail protein tail 1 20787 22031
APC43320.1 KX815338_p80 protein of an unannotated phage singleton unknown function unknown function 1 48059 48211
APC43263.1 KX815338_p23 protein of an unannotated phage phrog_1276 unknown function unknown function 1 18257 18562
APC43244.1 KX815338_p4 protein of an unannotated phage phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 1136 1306
APC43246.1 KX815338_p6 protein of an unannotated phage phrog_452 endonuclease DNA, RNA and nucleotide metabolism 1 1676 2047
APC43247.1 KX815338_p7 protein of an unannotated phage phrog_226 minor tail protein tail 1 2061 2489
APC43249.1 KX815338_p9 protein of an unannotated phage phrog_104 portal protein head and packaging 1 4182 5615
APC43254.1 KX815338_p14 protein of an unannotated phage phrog_320 head closure Hc1 connector 1 8931 9266
APC43297.1 KX815338_p57 protein of an unannotated phage phrog_5971 unknown function unknown function -1 39866 40045
APC43243.1 KX815338_p3 protein of an unannotated phage singleton unknown function unknown function -1 680 1144
APC43275.1 KX815338_p35 protein of an unannotated phage phrog_3912 unknown function unknown function 1 26211 26696
APC43300.1 KX815338_p60 protein of an unannotated phage phrog_3424 unknown function unknown function -1 40481 40726
APC43280.1 KX815338_p40 protein of an unannotated phage phrog_4673 unknown function unknown function 1 29013 29162
APC43305.1 KX815338_p65 protein of an unannotated phage phrog_4842 HNH endonuclease DNA, RNA and nucleotide metabolism -1 42538 43005
APC43296.1 KX815338_p56 protein of an unannotated phage phrog_4071 unknown function unknown function -1 39618 39869
APC43259.1 KX815338_p19 protein of an unannotated phage phrog_5813 tail assembly chaperone tail 1 11467 11772
APC43278.1 KX815338_p38 protein of an unannotated phage phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 27685 28575
APC43302.1 KX815338_p62 protein of an unannotated phage phrog_4024 unknown function unknown function -1 41232 41621
APC43306.1 KX815338_p66 protein of an unannotated phage phrog_3908 unknown function unknown function -1 43112 43336
APC43266.1 KX815338_p26 protein of an unannotated phage phrog_9468 unknown function unknown function 1 20330 20713
APC43291.1 KX815338_p51 protein of an unannotated phage phrog_17008 unknown function unknown function 1 35695 36195
APC43294.1 KX815338_p54 protein of an unannotated phage phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 38337 38945
APC43271.1 KX815338_p31 protein of an unannotated phage phrog_4061 unknown function unknown function -1 23632 23916
APC43279.1 KX815338_p39 protein of an unannotated phage phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 28654 29016
APC43290.1 KX815338_p50 protein of an unannotated phage phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism 1 35390 35695
APC43312.1 KX815338_p72 protein of an unannotated phage phrog_4239 unknown function unknown function -1 45179 45622
APC43264.1 KX815338_p24 protein of an unannotated phage phrog_6320 tail fiber protein tail 1 18562 19755
APC43283.1 KX815338_p43 protein of an unannotated phage phrog_3979 unknown function unknown function 1 30439 30648
APC43299.1 KX815338_p59 protein of an unannotated phage phrog_15765 unknown function unknown function -1 40338 40484
APC43268.1 KX815338_p28 protein of an unannotated phage phrog_3534 unknown function unknown function 1 22028 22375
APC43295.1 KX815338_p55 protein of an unannotated phage phrog_15428 unknown function unknown function -1 39050 39574
APC43315.1 KX815338_p75 protein of an unannotated phage phrog_4275 unknown function unknown function -1 46386 46532
APC43282.1 KX815338_p42 protein of an unannotated phage phrog_4022 unknown function unknown function 1 30095 30439
APC43321.1 KX815338_p81 protein of an unannotated phage singleton unknown function unknown function 1 48229 48873
APC43256.1 KX815338_p16 protein of an unannotated phage phrog_123 tail terminator connector 1 9669 10172
APC43262.1 KX815338_p22 protein of an unannotated phage phrog_538 minor tail protein tail 1 17036 18253
APC43281.1 KX815338_p41 protein of an unannotated phage phrog_849 DNA primase DNA, RNA and nucleotide metabolism 1 29433 30098
APC43303.1 KX815338_p63 protein of an unannotated phage phrog_139 deoxynucleoside monophosphate kinase other -1 41685 42281
APC43319.1 KX815338_p79 protein of an unannotated phage phrog_2563 unknown function unknown function -1 47689 48060
APC43308.1 KX815338_p68 protein of an unannotated phage phrog_18679 unknown function unknown function -1 43789 43998
APC43265.1 KX815338_p25 protein of an unannotated phage phrog_4817 unknown function unknown function 1 19790 20302
APC43251.1 KX815338_p11 protein of an unannotated phage phrog_233 head scaffolding protein head and packaging 1 6710 7246
APC43307.1 KX815338_p67 protein of an unannotated phage phrog_4785 unknown function unknown function -1 43399 43686
APC43317.1 KX815338_p77 protein of an unannotated phage phrog_4485 unknown function unknown function -1 47472 47591
APC43304.1 KX815338_p64 protein of an unannotated phage phrog_3991 unknown function unknown function -1 42278 42538
APC43314.1 KX815338_p74 protein of an unannotated phage phrog_2355 unknown function unknown function -1 45988 46383
APC43288.1 KX815338_p48 protein of an unannotated phage phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 33030 35093
APC43285.1 KX815338_p45 protein of an unannotated phage phrog_1340 unknown function unknown function 1 31816 32169
APC43248.1 KX815338_p8 protein of an unannotated phage phrog_9 terminase large subunit head and packaging 1 2505 4151
APC43261.1 KX815338_p21 protein of an unannotated phage phrog_33 distal tail protein Dit tail 1 16174 17031
APC43311.1 KX815338_p71 protein of an unannotated phage phrog_3994 unknown function unknown function -1 44655 45098
APC43313.1 KX815338_p73 protein of an unannotated phage phrog_6619 unknown function unknown function -1 45647 45907
APC43253.1 KX815338_p13 protein of an unannotated phage phrog_137 head-tail adaptor Ad1 connector 1 8476 8934
APC43273.1 KX815338_p33 protein of an unannotated phage phrog_20792 unknown function unknown function 1 24617 25171
APC43298.1 KX815338_p58 protein of an unannotated phage singleton unknown function unknown function -1 40045 40341
APC43318.1 KX815338_p78 protein of an unannotated phage singleton unknown function unknown function 1 47592 47708
APC43242.1 KX815338_p2 protein of an unannotated phage singleton unknown function unknown function 1 354 545
APC43272.1 KX815338_p32 protein of an unannotated phage phrog_3929 transcriptional repressor transcription regulation 1 24045 24500
APC43301.1 KX815338_p61 protein of an unannotated phage phrog_3965 unknown function unknown function -1 40740 41171
APC43270.1 KX815338_p30 protein of an unannotated phage phrog_4092 unknown function unknown function 1 23258 23560
APC43284.1 KX815338_p44 protein of an unannotated phage phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 30632 31819
APC43269.1 KX815338_p29 protein of an unannotated phage phrog_9589 endolysin lysis 1 22389 23261
APC43289.1 KX815338_p49 protein of an unannotated phage phrog_15237 unknown function unknown function 1 35143 35310
APC43292.1 KX815338_p52 protein of an unannotated phage phrog_11213 unknown function unknown function -1 36301 36489
APC43276.1 KX815338_p36 protein of an unannotated phage phrog_1288 unknown function unknown function 1 26772 27206
APC43258.1 KX815338_p18 protein of an unannotated phage phrog_330 tail assembly chaperone tail 1 11063 11386
APC43316.1 KX815338_p76 protein of an unannotated phage phrog_4313 unknown function unknown function -1 46631 47263
APC43277.1 KX815338_p37 protein of an unannotated phage phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 27281 27685
APC43274.1 KX815338_p34 protein of an unannotated phage phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 25161 26078
APC43309.1 KX815338_p69 protein of an unannotated phage phrog_15073 unknown function unknown function -1 43999 44190
APC43260.1 KX815338_p20 protein of an unannotated phage phrog_305 tail length tape measure protein tail 1 11777 16171
APC43287.1 KX815338_p47 protein of an unannotated phage phrog_4123 unknown function unknown function 1 32562 32927