Genomic map of Mycobacterium phage Tuco (KX817173)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX817173
Definition
Mycobacterium phage Tuco, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus; unclassified Kostyavirus.
DB of origin
NUCCORE
Length
76944
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
148
%GC
63.01
Number of singletons
1
Number of paralogs
5

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APC44068.1 KX817173_p125 hypothetical protein phrog_2823 unknown function unknown function 1 69856 70056
APC43951.1 KX817173_p8 hypothetical protein phrog_2202 unknown function unknown function -1 1956 2255
APC43968.1 KX817173_p25 minor tail protein phrog_110 minor tail protein tail 1 20261 21940
APC43975.1 KX817173_p32 membrane domain protein phrog_411 unknown function unknown function 1 29791 30075
APC43963.1 KX817173_p21 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 12469 12930
APC43998.1 KX817173_p55 membrane domain protein phrog_950 unknown function unknown function -1 40110 40883
APC44004.1 KX817173_p61 DNA binding protein phrog_2800 unknown function unknown function 1 42854 43132
APC44058.1 KX817173_p115 hypothetical protein phrog_8804 unknown function unknown function 1 67060 67269
APC44060.1 KX817173_p117 hypothetical protein phrog_1941 unknown function unknown function 1 67352 67594
APC43976.1 KX817173_p33 lysin A phrog_317 endolysin lysis 1 30149 31651
APC43989.1 KX817173_p46 hypothetical protein phrog_4396 unknown function unknown function -1 36737 36865
APC44041.1 KX817173_p98 hypothetical protein phrog_2788 unknown function unknown function 1 58974 59309
APC44052.1 KX817173_p109 hypothetical protein phrog_1042 unknown function unknown function 1 64570 64833
APC44074.1 KX817173_p132 hypothetical protein phrog_2579 ParB C-terminal domain DNA, RNA and nucleotide metabolism -1 71281 71670
APC44047.1 KX817173_p104 hypothetical protein phrog_2785 unknown function unknown function 1 62589 62945
APC44018.1 KX817173_p75 membrane domain protein phrog_1622 unknown function unknown function 1 48662 48835
APC44050.1 KX817173_p107 HNH endonuclease phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism 1 63605 63895
APC44019.1 KX817173_p76 hypothetical protein phrog_2793 unknown function unknown function 1 48838 49071
APC44036.1 KX817173_p93 HTH DNA binding protein phrog_1590 unknown function unknown function 1 56823 57644
APC43987.1 KX817173_p44 hypothetical protein phrog_722 unknown function unknown function -1 35852 36340
APC43970.1 KX817173_p27 minor tail protein phrog_346 minor tail protein tail 1 22799 25195
APC43964.1 KX817173_p20 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 12469 13343
APC44069.1 KX817173_p126 hypothetical protein phrog_2296 unknown function unknown function 1 70053 70190
APC44085.1 KX817173_p143 hypothetical protein phrog_1438 unknown function unknown function -1 74998 75171
APC44089.1 KX817173_p147 hypothetical protein phrog_2762 unknown function unknown function 1 76152 76373
APC44028.1 KX817173_p85 hypothetical protein phrog_2747 unknown function unknown function 1 52669 52890
APC43966.1 KX817173_p23 tape measure protein phrog_2723 tail length tape measure protein tail 1 13849 18582
APC43958.1 KX817173_p15 head-to-tail connector protein phrog_442 head-tail adaptor connector 1 9678 10244
APC44034.1 KX817173_p91 membrane domain protein phrog_2844 unknown function unknown function 1 55366 55464
APC43980.1 KX817173_p37 membrane domain protein phrog_726 unknown function unknown function 1 33220 33636
APC44091.1 KX817173_p130 hypothetical protein phrog_6448 unknown function unknown function 1 70644 70757
APC44077.1 KX817173_p135 hypothetical protein phrog_3034 unknown function unknown function -1 72111 72479
APC44090.1 KX817173_p148 HNH endonuclease phrog_589 HNH endonuclease DNA, RNA and nucleotide metabolism 1 76363 76710
APC43946.1 KX817173_p3 hypothetical protein phrog_2829 unknown function unknown function 1 446 604
APC43949.1 KX817173_p6 terminase small subunit phrog_83 terminase small subunit head and packaging 1 1057 1518
APC44009.1 KX817173_p66 hypothetical protein phrog_2221 unknown function unknown function 1 44348 44509
APC44000.1 KX817173_p57 hypothetical protein phrog_3071 unknown function unknown function 1 41635 41733
APC44013.1 KX817173_p70 ERF family ssDNA binding protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 46424 47146
APC44062.1 KX817173_p119 hypothetical protein phrog_2965 unknown function unknown function 1 68561 68698
APC44016.1 KX817173_p73 hypothetical protein phrog_1389 unknown function unknown function 1 47920 48288
APC44082.1 KX817173_p140 hypothetical protein phrog_2287 unknown function unknown function -1 73797 74033
APC44073.1 KX817173_p131 helix-turn-helix DNA binding domain protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 71021 71284
APC44043.1 KX817173_p100 DNA methylase phrog_67 DNA methyltransferase other 1 59845 61065
APC44037.1 KX817173_p94 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 57641 57901
APC44078.1 KX817173_p136 hypothetical protein phrog_1915 unknown function unknown function -1 72476 72934
APC44022.1 KX817173_p79 hypothetical protein phrog_1673 unknown function unknown function 1 49785 50021
APC43984.1 KX817173_p41 DNA bridging protein phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism -1 34760 35146
APC44020.1 KX817173_p77 DNA processing chain A phrog_289 GTP-binding domain other 1 49068 49481
APC44017.1 KX817173_p74 hypothetical protein phrog_572 unknown function unknown function 1 48285 48662
APC44014.1 KX817173_p71 hypothetical protein phrog_2750 unknown function unknown function 1 47139 47450
APC44056.1 KX817173_p113 DNA polymerase III subunit phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 66129 66914
APC44051.1 KX817173_p108 hypothetical protein phrog_2846 unknown function unknown function 1 64349 64573
APC43974.1 KX817173_p31 HTH DNA binding protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 29482 29658
APC44021.1 KX817173_p78 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 49478 49795
APC43965.1 KX817173_p22 HNH endonuclease phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism 1 13333 13848
APC43997.1 KX817173_p54 hypothetical protein phrog_2842 unknown function unknown function 1 39893 40132
APC44076.1 KX817173_p134 hypothetical protein phrog_8201 unknown function unknown function -1 72040 72114
APC43982.1 KX817173_p39 HNH endonuclease phrog_1492 HNH endonuclease DNA, RNA and nucleotide metabolism -1 34050 34637
APC43995.1 KX817173_p52 membrane domain protein phrog_2847 unknown function unknown function -1 38320 38622
APC43952.1 KX817173_p9 terminase large subunit phrog_9 terminase large subunit head and packaging 1 2303 4966
APC43988.1 KX817173_p45 hypothetical protein phrog_647 unknown function unknown function -1 36333 36629
APC43945.1 KX817173_p2 hypothetical protein phrog_4110 unknown function unknown function 1 267 449
APC43950.1 KX817173_p7 membrane domain protein phrog_2142 unknown function unknown function 1 1511 1855
APC44023.1 KX817173_p80 hypothetical protein phrog_1882 unknown function unknown function 1 50018 50668
APC44079.1 KX817173_p137 hypothetical protein phrog_1587 unknown function unknown function -1 72949 73278
APC44080.1 KX817173_p138 hypothetical protein phrog_21747 unknown function unknown function -1 73290 73676
APC43996.1 KX817173_p53 integrase phrog_1 integrase integration and excision 1 38873 39754
APC44088.1 KX817173_p146 hypothetical protein phrog_2904 unknown function unknown function 1 75730 76077
APC43990.1 KX817173_p47 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 36865 37032
APC44032.1 KX817173_p89 polynucleotide kinase phrog_505 polynucleotide kinase other 1 53953 54894
APC44065.1 KX817173_p122 hypothetical protein phrog_3062 unknown function unknown function 1 69044 69298
APC44053.1 KX817173_p110 hydrolase phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 64844 65218
APC44084.1 KX817173_p142 hypothetical protein phrog_3174 unknown function unknown function -1 74601 74993
APC43969.1 KX817173_p26 minor tail protein phrog_732 minor tail protein tail 1 21949 22782
APC44031.1 KX817173_p88 membrane domain protein phrog_2894 unknown function unknown function 1 53604 53798
APC43993.1 KX817173_p50 hypothetical protein phrog_2815 unknown function unknown function -1 37492 37638
APC44038.1 KX817173_p95 hypothetical protein phrog_2853 unknown function unknown function 1 57918 58076
APC43979.1 KX817173_p36 lysin B phrog_102 endolysin lysis 1 32366 33223
APC43959.1 KX817173_p16 head-to-tail connector protein phrog_1531 head closure connector 1 10257 10592
APC44042.1 KX817173_p99 hypothetical protein phrog_1568 DNA binding protein DNA, RNA and nucleotide metabolism 1 59306 59848
APC43955.1 KX817173_p12 capsid maturation protease phrog_2753 head maturation protease head and packaging 1 6745 7839
APC44039.1 KX817173_p96 hypothetical protein phrog_889 unknown function unknown function 1 58073 58525
APC43992.1 KX817173_p49 hypothetical protein phrog_2702 unknown function unknown function -1 37258 37473
APC44071.1 KX817173_p128 hypothetical protein phrog_2897 unknown function unknown function 1 70366 70497
APC43961.1 KX817173_p18 head-to-tail connector protein phrog_813 head-tail adaptor connector 1 10947 11351
APC43981.1 KX817173_p38 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 33643 33888
APC44064.1 KX817173_p121 hypothetical protein singleton unknown function unknown function 1 68897 69034
APC44029.1 KX817173_p86 hypothetical protein phrog_3836 unknown function unknown function 1 52883 53248
APC43953.1 KX817173_p10 hypothetical protein phrog_2845 unknown function unknown function 1 4978 5199
APC44012.1 KX817173_p69 hypothetical protein phrog_572 unknown function unknown function 1 46021 46431
APC43991.1 KX817173_p48 hypothetical protein phrog_2893 unknown function unknown function -1 37029 37265
APC43983.1 KX817173_p40 hypothetical protein phrog_33228 unknown function unknown function -1 34641 34757
APC44083.1 KX817173_p141 hypothetical protein phrog_2883 unknown function unknown function -1 74049 74597
APC44059.1 KX817173_p116 hypothetical protein phrog_6210 unknown function unknown function 1 67266 67355
APC43985.1 KX817173_p42 hypothetical protein phrog_3481 unknown function unknown function -1 35194 35391
APC44008.1 KX817173_p65 hypothetical protein phrog_2147 unknown function unknown function 1 44115 44348
APC44070.1 KX817173_p127 hypothetical protein phrog_2925 unknown function unknown function 1 70187 70366
APC43967.1 KX817173_p24 minor tail protein phrog_106 minor tail protein tail 1 18612 20273
APC44063.1 KX817173_p120 hypothetical protein phrog_2755 unknown function unknown function 1 68685 68858
APC43999.1 KX817173_p56 immunity repressor phrog_2745 transcriptional repressor transcription regulation -1 40978 41409
APC44030.1 KX817173_p87 holiday junction resolvase phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 53245 53607
APC44087.1 KX817173_p145 hypothetical protein phrog_2795 unknown function unknown function -1 75410 75607
APC44027.1 KX817173_p84 WhiB family transcription factor phrog_1821 transcriptional regulator WhiB-like transcription regulation 1 52419 52694
APC44025.1 KX817173_p82 dsDNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 50990 52252
APC43960.1 KX817173_p17 head-to-tail connector protein phrog_2805 minor tail protein tail 1 10589 10969
APC43947.1 KX817173_p4 hypothetical protein phrog_2775 unknown function unknown function 1 601 786
APC43956.1 KX817173_p13 major capsid protein phrog_10 major head protein head and packaging 1 7927 9420
APC43977.1 KX817173_p34 holin phrog_526 holin lysis 1 31655 32038
APC44048.1 KX817173_p105 hypothetical protein phrog_2757 unknown function unknown function 1 62946 63236
APC43994.1 KX817173_p51 hypothetical protein phrog_2759 unknown function unknown function -1 37638 38033
APC44044.1 KX817173_p101 ssDNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 61058 61498
APC44066.1 KX817173_p123 hypothetical protein phrog_2174 unknown function unknown function 1 69247 69708
APC43954.1 KX817173_p11 portal protein phrog_12 portal protein head and packaging 1 5186 6742
APC44024.1 KX817173_p81 hypothetical protein phrog_572 unknown function unknown function 1 50665 50997
APC44075.1 KX817173_p133 hypothetical protein phrog_2942 unknown function unknown function -1 71789 72043
APC43948.1 KX817173_p5 hypothetical protein phrog_3858 unknown function unknown function 1 783 1064
APC43957.1 KX817173_p14 head-to-tail connector protein phrog_2796 head-tail connector protein connector 1 9487 9678
APC44046.1 KX817173_p103 hypothetical protein phrog_1454 unknown function unknown function 1 62395 62592
APC44049.1 KX817173_p106 HTH DNA binding protein phrog_1969 unknown function unknown function 1 63241 63552
APC44072.1 KX817173_p129 hypothetical protein phrog_3016 unknown function unknown function 1 70481 70642
APC44055.1 KX817173_p112 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 65525 66118
APC44005.1 KX817173_p62 hypothetical protein phrog_4633 unknown function unknown function 1 43441 43629
APC44081.1 KX817173_p139 hypothetical protein phrog_3730 unknown function unknown function -1 73682 73807
APC44067.1 KX817173_p124 hypothetical protein phrog_2764 unknown function unknown function 1 69705 69872
APC43944.1 KX817173_p1 hypothetical protein phrog_3456 unknown function unknown function 1 10 270
APC43962.1 KX817173_p19 major tail protein phrog_476 major tail protein tail 1 11378 12349
APC44040.1 KX817173_p97 hypothetical protein phrog_889 unknown function unknown function 1 58529 58972
APC43972.1 KX817173_p29 hypothetical protein phrog_553 minor tail protein tail 1 28033 28977
APC44026.1 KX817173_p83 hypothetical protein phrog_1091 unknown function unknown function 1 52249 52437
APC43973.1 KX817173_p30 hypothetical protein phrog_644 unknown function unknown function 1 29057 29485
APC44003.1 KX817173_p60 hypothetical protein phrog_2463 unknown function unknown function 1 42711 42857
APC44001.1 KX817173_p58 membrane domain protein phrog_2852 unknown function unknown function 1 41730 41867
APC44010.1 KX817173_p67 hypothetical protein phrog_762 unknown function unknown function 1 44556 45059
APC44002.1 KX817173_p59 pentapeptide repeat protein phrog_923 unknown function unknown function 1 41864 42709
APC44033.1 KX817173_p90 hypothetical protein phrog_2495 unknown function unknown function 1 55001 55369
APC44007.1 KX817173_p64 hypothetical protein phrog_3463 unknown function unknown function 1 44000 44107
APC43986.1 KX817173_p43 hypothetical protein phrog_647 unknown function unknown function -1 35388 35855
APC44035.1 KX817173_p92 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism 1 55461 56786
APC44086.1 KX817173_p144 hypothetical protein phrog_2772 unknown function unknown function -1 75168 75404
APC44057.1 KX817173_p114 hypothetical protein phrog_3647 unknown function unknown function 1 66911 67063
APC44061.1 KX817173_p118 DNA recombinase phrog_97 UvsX-like recombinase other 1 67602 68564
APC44054.1 KX817173_p111 nucleotide pyrophosphohydrolase phrog_4826 unknown function unknown function 1 65218 65535
APC44015.1 KX817173_p72 hypothetical protein phrog_2771 unknown function unknown function 1 47450 47920
APC43978.1 KX817173_p35 hypothetical protein phrog_2424 unknown function unknown function 1 32031 32369
APC44006.1 KX817173_p63 hypothetical protein phrog_2744 unknown function unknown function 1 43676 43981
APC44011.1 KX817173_p68 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 45056 46024
APC44045.1 KX817173_p102 protease phrog_94 head maturation protease head and packaging 1 61587 62393
APC43971.1 KX817173_p28 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 25192 28032