| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX826077 |
Definition |
Salmonella phage UPF_BP2, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Rosemountvirus; unclassified Rosemountvirus. |
DB of origin |
NUCCORE |
Length |
54894 |
Host Name |
Salmonella enterica |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
70 |
%GC |
46 |
Number of singletons |
2 |
Number of paralogs |
5 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APU03137.1 | KX826077_p19 | superfamily II helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 13351 | 15021 |
| APU03075.1 | KX826077_p59 | dihydrofolate reductase | phrog_316 | dihydrofolate reductase | DNA, RNA and nucleotide metabolism | -1 | 49825 | 50439 |
| APU03113.1 | KX826077_p63 | hypothetical protein | phrog_35114 | unknown function | unknown function | 1 | 52997 | 53254 |
| APU03126.1 | KX826077_p37 | baseplate protein | phrog_11 | baseplate spike | tail | -1 | 27844 | 28491 |
| APU03129.1 | KX826077_p54 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | -1 | 46423 | 47871 |
| APU03104.1 | KX826077_p5 | hypothetical protein | phrog_27896 | unknown function | unknown function | 1 | 4962 | 5291 |
| APU03132.1 | KX826077_p33 | tail fiber protein | phrog_30316 | tail fiber protein | tail | -1 | 24317 | 25651 |
| APU03110.1 | KX826077_p55 | hypothetical protein | phrog_38712 | unknown function | unknown function | -1 | 47875 | 48165 |
| APU03119.1 | KX826077_p64 | hypothetical protein | phrog_29626 | unknown function | unknown function | 1 | 53251 | 53424 |
| APU03101.1 | KX826077_p4 | hypothetical protein | phrog_2480 | unknown function | unknown function | 1 | 4546 | 4917 |
| APU03138.1 | KX826077_p46 | tail-associated protein | phrog_2871 | tail protein | tail | -1 | 37485 | 40442 |
| APU03082.1 | KX826077_p11 | hypothetical protein | phrog_33391 | unknown function | unknown function | 1 | 7118 | 7999 |
| APU03111.1 | KX826077_p56 | hypothetical protein | phrog_29999 | unknown function | unknown function | -1 | 48343 | 48633 |
| APU03080.1 | KX826077_p35 | hypothetical protein | phrog_6 | baseplate wedge subunit | tail | -1 | 26290 | 27462 |
| APU03128.1 | KX826077_p51 | major capsid protein | phrog_247 | major head protein | head and packaging | -1 | 42987 | 43964 |
| APU03135.1 | KX826077_p23 | thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 17458 | 18342 |
| APU03078.1 | KX826077_p30 | holin | phrog_1350 | holin | lysis | -1 | 22896 | 23156 |
| APU03087.1 | KX826077_p12 | hypothetical protein | phrog_13551 | unknown function | unknown function | 1 | 8395 | 8967 |
| APU03086.1 | KX826077_p45 | hypothetical protein | phrog_215 | structural protein with Ig domain | head and packaging | -1 | 36779 | 37417 |
| APU03125.1 | KX826077_p15 | ATPase | singleton | unknown function | unknown function | 1 | 10396 | 10809 |
| APU03123.1 | KX826077_p53 | portal protein | phrog_145 | portal protein | head and packaging | -1 | 44859 | 46421 |
| APU03085.1 | KX826077_p34 | hypothetical protein | phrog_587 | structural protein | head and packaging | -1 | 25644 | 26297 |
| APU03083.1 | KX826077_p38 | hypothetical protein | phrog_196 | baseplate hub | tail | -1 | 28491 | 29288 |
| APU03097.1 | KX826077_p41 | hypothetical protein | phrog_6419 | unknown function | unknown function | -1 | 32522 | 32950 |
| APU03130.1 | KX826077_p32 | tail fiber assembly protein | phrog_136 | tail fiber assembly protein | tail | -1 | 23766 | 24308 |
| APU03091.1 | KX826077_p49 | hypothetical protein | phrog_222 | tail completion or Neck1 protein | connector | -1 | 41893 | 42381 |
| APU03098.1 | KX826077_p21 | hypothetical protein | phrog_36727 | unknown function | unknown function | 1 | 16480 | 16878 |
| APU03099.1 | KX826077_p39 | hypothetical protein | phrog_349 | virion structural protein | head and packaging | -1 | 29392 | 29784 |
| APU03073.1 | KX826077_p24 | hypothetical protein | phrog_947 | DNA polymerase processivity factor | DNA, RNA and nucleotide metabolism | 1 | 18373 | 19368 |
| APU03133.1 | KX826077_p47 | tail fiber protein | phrog_27998 | tail fiber protein | tail | -1 | 40442 | 41065 |
| APU03107.1 | KX826077_p8 | hypothetical protein | phrog_27896 | unknown function | unknown function | 1 | 6036 | 6335 |
| APU03120.1 | KX826077_p68 | hypothetical protein | phrog_28081 | unknown function | unknown function | 1 | 54281 | 54448 |
| APU03108.1 | KX826077_p9 | hypothetical protein | phrog_22331 | unknown function | unknown function | 1 | 6426 | 6716 |
| APU03131.1 | KX826077_p31 | tail fiber assembly protein | phrog_136 | tail fiber assembly protein | tail | -1 | 23259 | 23762 |
| APU03089.1 | KX826077_p16 | hypothetical protein | phrog_2300 | unknown function | unknown function | 1 | 10917 | 11462 |
| APU03094.1 | KX826077_p13 | hypothetical protein | phrog_37080 | unknown function | unknown function | 1 | 9016 | 9462 |
| APU03077.1 | KX826077_p58 | guanylate kinase | phrog_761 | thymidylate kinase | other | -1 | 49322 | 49828 |
| APU03109.1 | KX826077_p10 | hypothetical protein | phrog_28927 | unknown function | unknown function | 1 | 6713 | 7003 |
| APU03093.1 | KX826077_p20 | hypothetical protein | phrog_28664 | unknown function | unknown function | 1 | 15335 | 15802 |
| APU03072.1 | KX826077_p14 | AAA family ATPase | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 9753 | 10418 |
| APU03105.1 | KX826077_p6 | hypothetical protein | phrog_22331 | unknown function | unknown function | 1 | 5360 | 5689 |
| APU03079.1 | KX826077_p25 | hypothetical protein | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 19368 | 21335 |
| APU03088.1 | KX826077_p61 | hypothetical protein | phrog_9997 | unknown function | unknown function | 1 | 52196 | 52768 |
| APU03103.1 | KX826077_p2 | hypothetical protein | phrog_28429 | unknown function | unknown function | -1 | 2729 | 3061 |
| APU03118.1 | KX826077_p69 | hypothetical protein | phrog_34345 | unknown function | unknown function | 1 | 54504 | 54683 |
| APU03141.1 | KX826077_p17 | YqaJ-like viral recombinase domain-containing protein | phrog_1990 | Cas4-domain exonuclease | DNA, RNA and nucleotide metabolism | 1 | 11993 | 12610 |
| APU03139.1 | KX826077_p50 | virion protein | phrog_477 | head-tail adaptor Ad1 | connector | -1 | 42381 | 42881 |
| APU03074.1 | KX826077_p22 | Cof hydrolase | phrog_671 | nucleotide pyrophosphohydrolase | other | 1 | 16865 | 17458 |
| APU03090.1 | KX826077_p48 | hypothetical protein | phrog_6920 | unknown function | unknown function | -1 | 41065 | 41592 |
| APU03076.1 | KX826077_p29 | endolysin translation | phrog_7 | endolysin | lysis | -1 | 22376 | 22882 |
| APU03115.1 | KX826077_p27 | hypothetical protein | phrog_54 | DksA-like zinc-finger protein | other | 1 | 21626 | 21850 |
| APU03095.1 | KX826077_p3 | hypothetical protein | phrog_37966 | unknown function | unknown function | 1 | 3215 | 3652 |
| APU03122.1 | KX826077_p67 | hypothetical protein | phrog_10979 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 54144 | 54269 |
| APU03102.1 | KX826077_p7 | hypothetical protein | phrog_2480 | unknown function | unknown function | 1 | 5647 | 5991 |
| APU03084.1 | KX826077_p57 | hypothetical protein | phrog_37540 | unknown function | unknown function | -1 | 48633 | 49325 |
| APU03117.1 | KX826077_p70 | hypothetical protein | phrog_32337 | unknown function | unknown function | 1 | 54680 | 54865 |
| APU03114.1 | KX826077_p36 | hypothetical protein | singleton | unknown function | unknown function | -1 | 27462 | 27713 |
| APU03106.1 | KX826077_p28 | hypothetical protein | phrog_214 | Rz-like spanin | lysis | -1 | 22068 | 22397 |
| APU03100.1 | KX826077_p65 | hypothetical protein | phrog_37772 | unknown function | unknown function | 1 | 53493 | 53882 |
| APU03096.1 | KX826077_p42 | hypothetical protein | phrog_280 | virion structural protein | head and packaging | -1 | 32969 | 33400 |
| APU03116.1 | KX826077_p66 | hypothetical protein | phrog_35966 | unknown function | unknown function | 1 | 53882 | 54082 |
| APU03092.1 | KX826077_p60 | hypothetical protein | phrog_1365 | unknown function | unknown function | -1 | 50500 | 50988 |
| APU03140.1 | KX826077_p18 | YqaJ-like viral recombinase domain-containing protein | phrog_1990 | Cas4-domain exonuclease | DNA, RNA and nucleotide metabolism | 1 | 12585 | 13292 |
| APU03127.1 | KX826077_p44 | Ig-like domain-containing protein | phrog_28902 | major tail protein | tail | -1 | 34638 | 36767 |
| APU03124.1 | KX826077_p1 | primase | phrog_3022 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 220 | 2748 |
| APU03134.1 | KX826077_p40 | tail tape measure protein | phrog_29251 | tail length tape measure protein | tail | -1 | 30677 | 32359 |
| APU03112.1 | KX826077_p26 | hypothetical protein | phrog_28954 | unknown function | unknown function | 1 | 21351 | 21626 |
| APU03121.1 | KX826077_p62 | hypothetical protein | phrog_35350 | unknown function | unknown function | 1 | 52833 | 52991 |
| APU03081.1 | KX826077_p43 | hypothetical protein | phrog_205 | tail sheath | tail | -1 | 33412 | 34551 |
| APU03136.1 | KX826077_p52 | scaffold protein | phrog_206 | head scaffolding protein | head and packaging | -1 | 43968 | 44681 |