Genomic map of Salmonella phage UPF_BP2 (KX826077)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX826077
Definition
Salmonella phage UPF_BP2, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Rosemountvirus; unclassified Rosemountvirus.
DB of origin
NUCCORE
Length
54894
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
70
%GC
46
Number of singletons
2
Number of paralogs
5

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APU03137.1 KX826077_p19 superfamily II helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 13351 15021
APU03075.1 KX826077_p59 dihydrofolate reductase phrog_316 dihydrofolate reductase DNA, RNA and nucleotide metabolism -1 49825 50439
APU03113.1 KX826077_p63 hypothetical protein phrog_35114 unknown function unknown function 1 52997 53254
APU03126.1 KX826077_p37 baseplate protein phrog_11 baseplate spike tail -1 27844 28491
APU03129.1 KX826077_p54 terminase large subunit phrog_2 terminase large subunit head and packaging -1 46423 47871
APU03104.1 KX826077_p5 hypothetical protein phrog_27896 unknown function unknown function 1 4962 5291
APU03132.1 KX826077_p33 tail fiber protein phrog_30316 tail fiber protein tail -1 24317 25651
APU03110.1 KX826077_p55 hypothetical protein phrog_38712 unknown function unknown function -1 47875 48165
APU03119.1 KX826077_p64 hypothetical protein phrog_29626 unknown function unknown function 1 53251 53424
APU03101.1 KX826077_p4 hypothetical protein phrog_2480 unknown function unknown function 1 4546 4917
APU03138.1 KX826077_p46 tail-associated protein phrog_2871 tail protein tail -1 37485 40442
APU03082.1 KX826077_p11 hypothetical protein phrog_33391 unknown function unknown function 1 7118 7999
APU03111.1 KX826077_p56 hypothetical protein phrog_29999 unknown function unknown function -1 48343 48633
APU03080.1 KX826077_p35 hypothetical protein phrog_6 baseplate wedge subunit tail -1 26290 27462
APU03128.1 KX826077_p51 major capsid protein phrog_247 major head protein head and packaging -1 42987 43964
APU03135.1 KX826077_p23 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism 1 17458 18342
APU03078.1 KX826077_p30 holin phrog_1350 holin lysis -1 22896 23156
APU03087.1 KX826077_p12 hypothetical protein phrog_13551 unknown function unknown function 1 8395 8967
APU03086.1 KX826077_p45 hypothetical protein phrog_215 structural protein with Ig domain head and packaging -1 36779 37417
APU03125.1 KX826077_p15 ATPase singleton unknown function unknown function 1 10396 10809
APU03123.1 KX826077_p53 portal protein phrog_145 portal protein head and packaging -1 44859 46421
APU03085.1 KX826077_p34 hypothetical protein phrog_587 structural protein head and packaging -1 25644 26297
APU03083.1 KX826077_p38 hypothetical protein phrog_196 baseplate hub tail -1 28491 29288
APU03097.1 KX826077_p41 hypothetical protein phrog_6419 unknown function unknown function -1 32522 32950
APU03130.1 KX826077_p32 tail fiber assembly protein phrog_136 tail fiber assembly protein tail -1 23766 24308
APU03091.1 KX826077_p49 hypothetical protein phrog_222 tail completion or Neck1 protein connector -1 41893 42381
APU03098.1 KX826077_p21 hypothetical protein phrog_36727 unknown function unknown function 1 16480 16878
APU03099.1 KX826077_p39 hypothetical protein phrog_349 virion structural protein head and packaging -1 29392 29784
APU03073.1 KX826077_p24 hypothetical protein phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism 1 18373 19368
APU03133.1 KX826077_p47 tail fiber protein phrog_27998 tail fiber protein tail -1 40442 41065
APU03107.1 KX826077_p8 hypothetical protein phrog_27896 unknown function unknown function 1 6036 6335
APU03120.1 KX826077_p68 hypothetical protein phrog_28081 unknown function unknown function 1 54281 54448
APU03108.1 KX826077_p9 hypothetical protein phrog_22331 unknown function unknown function 1 6426 6716
APU03131.1 KX826077_p31 tail fiber assembly protein phrog_136 tail fiber assembly protein tail -1 23259 23762
APU03089.1 KX826077_p16 hypothetical protein phrog_2300 unknown function unknown function 1 10917 11462
APU03094.1 KX826077_p13 hypothetical protein phrog_37080 unknown function unknown function 1 9016 9462
APU03077.1 KX826077_p58 guanylate kinase phrog_761 thymidylate kinase other -1 49322 49828
APU03109.1 KX826077_p10 hypothetical protein phrog_28927 unknown function unknown function 1 6713 7003
APU03093.1 KX826077_p20 hypothetical protein phrog_28664 unknown function unknown function 1 15335 15802
APU03072.1 KX826077_p14 AAA family ATPase phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 9753 10418
APU03105.1 KX826077_p6 hypothetical protein phrog_22331 unknown function unknown function 1 5360 5689
APU03079.1 KX826077_p25 hypothetical protein phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 19368 21335
APU03088.1 KX826077_p61 hypothetical protein phrog_9997 unknown function unknown function 1 52196 52768
APU03103.1 KX826077_p2 hypothetical protein phrog_28429 unknown function unknown function -1 2729 3061
APU03118.1 KX826077_p69 hypothetical protein phrog_34345 unknown function unknown function 1 54504 54683
APU03141.1 KX826077_p17 YqaJ-like viral recombinase domain-containing protein phrog_1990 Cas4-domain exonuclease DNA, RNA and nucleotide metabolism 1 11993 12610
APU03139.1 KX826077_p50 virion protein phrog_477 head-tail adaptor Ad1 connector -1 42381 42881
APU03074.1 KX826077_p22 Cof hydrolase phrog_671 nucleotide pyrophosphohydrolase other 1 16865 17458
APU03090.1 KX826077_p48 hypothetical protein phrog_6920 unknown function unknown function -1 41065 41592
APU03076.1 KX826077_p29 endolysin translation phrog_7 endolysin lysis -1 22376 22882
APU03115.1 KX826077_p27 hypothetical protein phrog_54 DksA-like zinc-finger protein other 1 21626 21850
APU03095.1 KX826077_p3 hypothetical protein phrog_37966 unknown function unknown function 1 3215 3652
APU03122.1 KX826077_p67 hypothetical protein phrog_10979 membrane protein moron, auxiliary metabolic gene and host takeover 1 54144 54269
APU03102.1 KX826077_p7 hypothetical protein phrog_2480 unknown function unknown function 1 5647 5991
APU03084.1 KX826077_p57 hypothetical protein phrog_37540 unknown function unknown function -1 48633 49325
APU03117.1 KX826077_p70 hypothetical protein phrog_32337 unknown function unknown function 1 54680 54865
APU03114.1 KX826077_p36 hypothetical protein singleton unknown function unknown function -1 27462 27713
APU03106.1 KX826077_p28 hypothetical protein phrog_214 Rz-like spanin lysis -1 22068 22397
APU03100.1 KX826077_p65 hypothetical protein phrog_37772 unknown function unknown function 1 53493 53882
APU03096.1 KX826077_p42 hypothetical protein phrog_280 virion structural protein head and packaging -1 32969 33400
APU03116.1 KX826077_p66 hypothetical protein phrog_35966 unknown function unknown function 1 53882 54082
APU03092.1 KX826077_p60 hypothetical protein phrog_1365 unknown function unknown function -1 50500 50988
APU03140.1 KX826077_p18 YqaJ-like viral recombinase domain-containing protein phrog_1990 Cas4-domain exonuclease DNA, RNA and nucleotide metabolism 1 12585 13292
APU03127.1 KX826077_p44 Ig-like domain-containing protein phrog_28902 major tail protein tail -1 34638 36767
APU03124.1 KX826077_p1 primase phrog_3022 DNA primase DNA, RNA and nucleotide metabolism -1 220 2748
APU03134.1 KX826077_p40 tail tape measure protein phrog_29251 tail length tape measure protein tail -1 30677 32359
APU03112.1 KX826077_p26 hypothetical protein phrog_28954 unknown function unknown function 1 21351 21626
APU03121.1 KX826077_p62 hypothetical protein phrog_35350 unknown function unknown function 1 52833 52991
APU03081.1 KX826077_p43 hypothetical protein phrog_205 tail sheath tail -1 33412 34551
APU03136.1 KX826077_p52 scaffold protein phrog_206 head scaffolding protein head and packaging -1 43968 44681