Genomic map of Staphylococcus phage SpT99F3 (KX827371)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX827371
Definition
Staphylococcus phage SpT99F3, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Biseptimavirus; unclassified Biseptimavirus.
DB of origin
NUCCORE
Length
40751
Host Name
Staphylococcus pseudintermedius
Host domain
Bacteria
Is prophage?
undef
Number of proteins
68
%GC
35.58
Number of singletons
3
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APD19960.1 KX827371_p11 CRISPR associated protein phrog_1090 unknown function unknown function -1 5722 5991
APD19983.1 KX827371_p34 deoxyuridine triphosphate nucleotidohydrolase phrog_173 nucleoside triphosphate pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 15023 15568
APD20005.1 KX827371_p56 hypothetical protein phrog_187 head-tail adaptor connector 1 26393 26839
APD20014.1 KX827371_p65 lysin phrog_635 endolysin lysis 1 37631 39091
APD20011.1 KX827371_p62 hypothetical protein phrog_1747 unknown function unknown function 1 36672 36947
APD19998.1 KX827371_p49 capsid protein phrog_10 major head protein head and packaging 1 22627 23847
APD20017.1 KX827371_p68 hypothetical protein singleton unknown function unknown function 1 40089 40184
APD19974.1 KX827371_p25 hypothetical protein phrog_13457 unknown function unknown function 1 12576 12740
APD19997.1 KX827371_p48 prohead protease phrog_80 head maturation protease head and packaging 1 21976 22548
APD19969.1 KX827371_p20 hypothetical protein phrog_398 unknown function unknown function 1 9262 9930
APD19968.1 KX827371_p19 hypothetical protein phrog_36718 unknown function unknown function 1 9059 9253
APD19986.1 KX827371_p37 hypothetical protein phrog_20229 unknown function unknown function 1 16048 16329
APD19985.1 KX827371_p36 hypothetical protein phrog_278 transcriptional regulator transcription regulation 1 15844 16032
APD19987.1 KX827371_p38 transcriptional activator RinB phrog_152 RinB-like transcriptional activator transcription regulation 1 16326 16469
APD20002.1 KX827371_p53 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 24635 25012
APD19959.1 KX827371_p10 hypothetical protein phrog_750 unknown function unknown function -1 5186 5551
APD19975.1 KX827371_p26 hypothetical protein phrog_1689 nucleotide kinase other 1 12740 13201
APD19979.1 KX827371_p30 hypothetical protein phrog_14320 unknown function unknown function 1 13812 14063
APD19976.1 KX827371_p27 hypothetical protein phrog_258 virulence associated other 1 13202 13378
APD20000.1 KX827371_p51 head-tail connector protein phrog_40 head-tail adaptor Ad1 connector 1 24041 24322
APD19972.1 KX827371_p23 hypothetical protein phrog_809 transcriptional regulator transcription regulation 1 11417 11596
APD20009.1 KX827371_p60 hypothetical protein phrog_1786 minor head protein head and packaging 1 32998 36507
APD19990.1 KX827371_p41 hypothetical protein phrog_36 transcriptional regulator transcription regulation 1 16962 17384
APD20010.1 KX827371_p61 hypothetical protein phrog_1399 unknown function unknown function 1 36488 36625
APD19973.1 KX827371_p24 hypothetical protein phrog_433 unknown function unknown function 1 12021 12239
APD19984.1 KX827371_p35 hypothetical protein phrog_2027 unknown function unknown function 1 15605 15847
APD19965.1 KX827371_p16 hypothetical protein phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 7487 7972
APD19953.1 KX827371_p4 hypothetical protein phrog_11228 lipoprotein other -1 2137 2637
APD20004.1 KX827371_p55 tail protein phrog_88 major tail protein tail 1 25383 26327
APD20007.1 KX827371_p58 tail tape measure protein phrog_167 tail length tape measure protein tail 1 27038 31480
APD19977.1 KX827371_p28 hypothetical protein phrog_3683 unknown function unknown function 1 13457 13669
APD19980.1 KX827371_p31 hypothetical protein phrog_467 unknown function unknown function 1 14060 14461
APD19982.1 KX827371_p33 hypothetical protein phrog_26395 unknown function unknown function 1 14803 15030
APD19988.1 KX827371_p39 hypothetical protein singleton unknown function unknown function 1 16469 16771
APD19961.1 KX827371_p12 hypothetical protein phrog_1263 unknown function unknown function 1 6057 6197
APD19963.1 KX827371_p14 hypothetical protein phrog_401 unknown function unknown function 1 6968 7228
APD19954.1 KX827371_p5 hypothetical protein phrog_4 transcriptional repressor transcription regulation -1 2691 3317
APD20012.1 KX827371_p63 hypothetical protein phrog_276 unknown function unknown function 1 36956 37255
APD19951.1 KX827371_p2 hypothetical protein phrog_4525 unknown function unknown function 1 1296 1892
APD19962.1 KX827371_p13 hypothetical protein phrog_3505 unknown function unknown function -1 6190 6399
APD20001.1 KX827371_p52 head-tail connector protein phrog_25 head closure Hc1 connector 1 24303 24635
APD19958.1 KX827371_p9 hypothetical protein phrog_643 transcriptional regulator transcription regulation 1 4972 5217
APD19999.1 KX827371_p50 hypothetical protein phrog_933 unknown function unknown function 1 23864 24022
APD19967.1 KX827371_p18 single-stranded DNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 8641 9078
APD20006.1 KX827371_p57 hypothetical protein phrog_15504 unknown function unknown function 1 26881 27021
APD20015.1 KX827371_p66 hypothetical protein phrog_7919 unknown function unknown function 1 39316 39630
APD19981.1 KX827371_p32 hypothetical protein phrog_12537 unknown function unknown function 1 14461 14802
APD19996.1 KX827371_p47 portal protein phrog_12 portal protein head and packaging 1 20730 22001
APD19957.1 KX827371_p8 antirepressor phrog_63 anti-repressor Ant transcription regulation 1 4208 4960
APD19966.1 KX827371_p17 hypothetical protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 7973 8641
APD19956.1 KX827371_p7 hypothetical protein phrog_847 anti-repressor Ant transcription regulation 1 3727 4170
APD19950.1 KX827371_p1 integrase phrog_1 integrase integration and excision -1 118 1164
APD20013.1 KX827371_p64 hypothetical protein phrog_263 holin lysis 1 37381 37629
APD19992.1 KX827371_p43 HNH endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 17894 18250
APD20008.1 KX827371_p59 tail protein phrog_202 distal tail protein Dit tail 1 31480 32970
APD20003.1 KX827371_p54 hypothetical protein phrog_78 tail terminator connector 1 25009 25395
APD19994.1 KX827371_p45 terminase large subunit phrog_9 terminase large subunit head and packaging 1 18815 20515
APD19964.1 KX827371_p15 hypothetical protein phrog_3119 unknown function unknown function 1 7240 7503
APD19955.1 KX827371_p6 helix-turn-helix protein phrog_3 transcriptional repressor transcription regulation 1 3469 3693
APD19995.1 KX827371_p46 hypothetical protein phrog_1142 unknown function unknown function 1 20527 20724
APD19991.1 KX827371_p42 hypothetical protein phrog_229 MazG-like pyrophosphatase other 1 17511 17888
APD19971.1 KX827371_p22 replicative DNA helicase phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 10650 11423
APD19952.1 KX827371_p3 hypothetical protein singleton unknown function unknown function -1 1893 2150
APD20016.1 KX827371_p67 hypothetical protein phrog_7090 unknown function unknown function 1 39617 39970
APD19989.1 KX827371_p40 hypothetical protein phrog_386 unknown function unknown function 1 16774 16950
APD19978.1 KX827371_p29 hypothetical protein phrog_12650 unknown function unknown function 1 13639 13815
APD19993.1 KX827371_p44 terminase small subunit phrog_83 terminase small subunit head and packaging 1 18345 18815
APD19970.1 KX827371_p21 hypothetical protein phrog_428 replication initiation protein DNA, RNA and nucleotide metabolism 1 9927 10640