| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX845404 |
Definition |
Klebsiella phage vB_Kpn_IME260, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Sugarlandvirus; Klebsiella virus IME260. |
DB of origin |
NUCCORE |
Length |
123490 |
Host Name |
Klebsiella pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
149 |
%GC |
45.37 |
Number of singletons |
15 |
Number of paralogs |
16 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AOZ65442.1 | KX845404_p109 | recombinase | phrog_100 | SbcD-like subunit of palindrome specific endonuclease | DNA, RNA and nucleotide metabolism | 1 | 72590 | 73582 |
| AOZ65468.1 | KX845404_p135 | hypothetical protein | phrog_37669 | unknown function | unknown function | 1 | 111990 | 112214 |
| APT41085.1 | KX845404_p39 | deoxynucleotide monophosphate kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 22676 | 23437 |
| AOZ65437.1 | KX845404_p105 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 66803 | 69373 |
| AOZ65425.1 | KX845404_p93 | D2 protein | phrog_3611 | helicase | DNA, RNA and nucleotide metabolism | 1 | 59088 | 59783 |
| APT41051.1 | KX845404_p3 | A1 protein | phrog_1745 | DNA transfer protein | other | -1 | 1396 | 3078 |
| APT41112.1 | KX845404_p66 | sensor histidine kinase | phrog_944 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 37914 | 38291 |
| APT41078.1 | KX845404_p32 | hypothetical protein | singleton | unknown function | unknown function | -1 | 18764 | 19057 |
| APT41143.1 | KX845404_p131 | hypothetical protein | phrog_37261 | unknown function | unknown function | -1 | 107426 | 107590 |
| APT41155.1 | KX845404_p148 | S9 family peptidase | phrog_24947 | unknown function | unknown function | -1 | 121852 | 122190 |
| APT41107.1 | KX845404_p61 | cilia- and flagella-associated protein 74 | phrog_38680 | unknown function | unknown function | -1 | 34100 | 34315 |
| APT41049.1 | KX845404_p1 | deoxynucleoside-5'-monophosphatase | phrog_415 | polynucleotide kinase | other | -1 | 90 | 806 |
| APT41141.1 | KX845404_p124 | hypothetical protein | phrog_3907 | tail terminator | connector | -1 | 101742 | 102137 |
| AOZ65446.1 | KX845404_p113 | deoxyuridine 5'-triphosphate nucleotidohydrolase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 76758 | 77201 |
| AOZ65466.1 | KX845404_p133 | hypothetical protein | phrog_3802 | terminase small subunit | head and packaging | -1 | 109416 | 109889 |
| APT41104.1 | KX845404_p58 | hypothetical protein | phrog_20797 | unknown function | unknown function | -1 | 31409 | 31573 |
| APT41082.1 | KX845404_p36 | endolysin | phrog_465 | endolysin | lysis | -1 | 20825 | 21238 |
| APT41092.1 | KX845404_p46 | RNA polymerase sigma-54 factor | phrog_38783 | unknown function | unknown function | -1 | 27144 | 27449 |
| APT41111.1 | KX845404_p65 | hypothetical protein | phrog_9814 | unknown function | unknown function | -1 | 35880 | 36071 |
| APT41105.1 | KX845404_p59 | hypothetical protein | phrog_9447 | unknown function | unknown function | -1 | 31673 | 32011 |
| AOZ65439.1 | KX845404_p107 | DNA helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 69860 | 71218 |
| APT41147.1 | KX845404_p140 | A2 protein | phrog_1725 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 116936 | 117340 |
| APT41139.1 | KX845404_p106 | hypothetical protein | phrog_4386 | unknown function | unknown function | 1 | 69342 | 69863 |
| APT41099.1 | KX845404_p53 | hypothetical protein | phrog_37394 | unknown function | unknown function | -1 | 29371 | 29547 |
| APT41148.1 | KX845404_p141 | hypothetical protein | phrog_3747 | unknown function | unknown function | -1 | 117680 | 117940 |
| APT41106.1 | KX845404_p60 | hypothetical protein | singleton | unknown function | unknown function | -1 | 32014 | 32127 |
| AOZ65447.1 | KX845404_p114 | tail fiber protein | phrog_22285 | tail fiber protein | tail | -1 | 77243 | 79285 |
| APT41120.1 | KX845404_p74 | hypothetical protein | singleton | unknown function | unknown function | -1 | 43355 | 43483 |
| APT41115.1 | KX845404_p69 | hypothetical protein | singleton | unknown function | unknown function | -1 | 38955 | 39248 |
| APT41073.1 | KX845404_p27 | hypothetical protein | phrog_4979 | unknown function | unknown function | -1 | 16675 | 17103 |
| APT41077.1 | KX845404_p31 | serine/threonine protein phosphatase | phrog_246 | NinI-like serine-threonine phosphatase | other | -1 | 17910 | 18740 |
| APT41127.1 | KX845404_p83 | hypothetical protein | phrog_5357 | tail length tape measure protein | tail | -1 | 50135 | 50344 |
| AOZ65453.1 | KX845404_p120 | hypothetical protein | phrog_3914 | tail assembly chaperone | tail | -1 | 98868 | 99194 |
| APT41064.1 | KX845404_p18 | hypothetical protein | phrog_28921 | unknown function | unknown function | -1 | 13010 | 13411 |
| APT41075.1 | KX845404_p29 | hypothetical protein | phrog_7810 | unknown function | unknown function | -1 | 17289 | 17657 |
| APT41072.1 | KX845404_p26 | hypothetical protein | phrog_3880 | unknown function | unknown function | -1 | 16288 | 16593 |
| APT41140.1 | KX845404_p110 | recombination-related endonuclease | phrog_77 | SbcC-like subunit of palindrome specific endonuclease | DNA, RNA and nucleotide metabolism | 1 | 73566 | 75401 |
| APT41084.1 | KX845404_p38 | ATP-dependent Clp protease proteolytic subunit | phrog_1827 | ATP-dependent protease | other | -1 | 22055 | 22666 |
| APT41124.1 | KX845404_p78 | hypothetical protein | singleton | unknown function | unknown function | -1 | 44645 | 44770 |
| APT41103.1 | KX845404_p57 | hypothetical protein | singleton | unknown function | unknown function | -1 | 30684 | 30800 |
| AOZ65463.1 | KX845404_p130 | portal (connector) protein | phrog_12 | portal protein | head and packaging | -1 | 106215 | 107426 |
| APT41067.1 | KX845404_p21 | hypothetical protein | phrog_4215 | unknown function | unknown function | -1 | 14753 | 15220 |
| APT41070.1 | KX845404_p24 | hypothetical protein | phrog_4804 | unknown function | unknown function | -1 | 15762 | 16010 |
| APT41152.1 | KX845404_p145 | hypothetical protein | phrog_32448 | unknown function | unknown function | -1 | 119676 | 119825 |
| AOZ65434.1 | KX845404_p102 | D5 protein | phrog_323 | transcriptional regulator, D5-like | transcription regulation | 1 | 63529 | 64287 |
| AOZ65426.1 | KX845404_p94 | hypothetical protein | singleton | unknown function | unknown function | 1 | 59860 | 59994 |
| APT41132.1 | KX845404_p89 | hypothetical protein | phrog_2502 | unknown function | unknown function | 1 | 54717 | 55004 |
| AOZ65429.2 | KX845404_p9 | restriction endonuclease subunit R | phrog_33736 | unknown function | unknown function | -1 | 6119 | 6301 |
| APT41145.1 | KX845404_p138 | A1 protein | phrog_1745 | DNA transfer protein | other | -1 | 114609 | 116291 |
| APT41116.1 | KX845404_p70 | hypothetical protein | phrog_18988 | unknown function | unknown function | -1 | 39656 | 39982 |
| APT41062.1 | KX845404_p16 | hypothetical protein | phrog_8583 | unknown function | unknown function | -1 | 11235 | 12098 |
| APT41119.1 | KX845404_p73 | hypothetical protein | phrog_4516 | unknown function | unknown function | -1 | 42815 | 43225 |
| AOZ65454.1 | KX845404_p121 | hypothetical protein | phrog_313 | Tail assembly chaperone | tail | -1 | 99268 | 99690 |
| AOZ65441.1 | KX845404_p108 | hypothetical protein | phrog_1607 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 71777 | 72550 |
| APT41128.1 | KX845404_p84 | hypothetical protein | phrog_6828 | unknown function | unknown function | -1 | 50359 | 50472 |
| APT41137.1 | KX845404_p97 | hypothetical protein | phrog_20800 | unknown function | unknown function | 1 | 60916 | 61137 |
| APT41154.1 | KX845404_p147 | hypothetical protein | phrog_4263 | unknown function | unknown function | -1 | 120814 | 121779 |
| APT41076.1 | KX845404_p30 | hypothetical protein | phrog_2183 | unknown function | unknown function | -1 | 17666 | 17899 |
| APT41153.1 | KX845404_p146 | hypothetical protein | phrog_22359 | unknown function | unknown function | -1 | 120254 | 120748 |
| APT41125.1 | KX845404_p79 | thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 44885 | 45739 |
| AOZ65436.1 | KX845404_p104 | DNA primase/helicase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 65851 | 66735 |
| APT41114.1 | KX845404_p68 | hypothetical protein | phrog_27985 | unknown function | unknown function | -1 | 38628 | 38825 |
| APT41113.1 | KX845404_p67 | hypothetical protein | phrog_34959 | unknown function | unknown function | -1 | 38419 | 38628 |
| AOZ65427.1 | KX845404_p95 | D3 protein | phrog_1725 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 60068 | 60469 |
| APT41061.1 | KX845404_p15 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10155 | 10304 |
| AOZ65430.1 | KX845404_p98 | hypothetical protein | phrog_38634 | unknown function | unknown function | 1 | 61221 | 61358 |
| APT41058.1 | KX845404_p12 | hypothetical protein | phrog_4263 | unknown function | unknown function | -1 | 7601 | 8566 |
| APT41054.1 | KX845404_p6 | hypothetical protein | phrog_3747 | unknown function | unknown function | -1 | 4467 | 4727 |
| APT41123.1 | KX845404_p77 | hypothetical protein | phrog_5321 | unknown function | unknown function | -1 | 44272 | 44547 |
| AOZ65445.1 | KX845404_p112 | ribonuclease H | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 75880 | 76758 |
| APT41079.1 | KX845404_p33 | hypothetical protein | phrog_6798 | unknown function | unknown function | -1 | 19091 | 19492 |
| AOZ65456.1 | KX845404_p123 | tail fibers protein | phrog_3575 | major tail protein | tail | -1 | 100591 | 101718 |
| APT41063.1 | KX845404_p17 | hypothetical protein | phrog_29505 | unknown function | unknown function | -1 | 12488 | 12997 |
| APT41065.1 | KX845404_p19 | hypothetical protein | phrog_8901 | unknown function | unknown function | -1 | 14105 | 14392 |
| APT41088.1 | KX845404_p42 | 6-phosphofructokinase | phrog_38458 | unknown function | unknown function | -1 | 24925 | 25281 |
| AOZ65452.1 | KX845404_p119 | tail length tape-measure protein | phrog_3779 | tail length tape measure protein | tail | -1 | 93705 | 98783 |
| APT41068.1 | KX845404_p22 | hypothetical protein | singleton | unknown function | unknown function | -1 | 15204 | 15332 |
| AOZ65461.1 | KX845404_p128 | capsid and scaffold protein | phrog_80 | head maturation protease | head and packaging | -1 | 104955 | 105551 |
| APT41091.1 | KX845404_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26768 | 26905 |
| AOZ65444.1 | KX845404_p111 | endonuclease | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 75401 | 75883 |
| AOZ65431.2 | KX845404_p10 | hypothetical protein | phrog_32448 | unknown function | unknown function | -1 | 6463 | 6612 |
| AOZ65448.1 | KX845404_p115 | tail protein | phrog_1084 | unknown function | unknown function | -1 | 79285 | 79704 |
| APT41057.1 | KX845404_p11 | hypothetical protein | phrog_22359 | unknown function | unknown function | -1 | 7041 | 7535 |
| APT41089.1 | KX845404_p43 | hypothetical protein | phrog_30402 | unknown function | unknown function | -1 | 25864 | 26136 |
| APT41108.1 | KX845404_p62 | ATP-dependent chaperone | phrog_31732 | unknown function | unknown function | -1 | 34315 | 34692 |
| APT41081.1 | KX845404_p35 | hypothetical protein | phrog_4328 | unknown function | unknown function | -1 | 19871 | 20275 |
| APT41059.1 | KX845404_p13 | S9 family peptidase | phrog_24947 | unknown function | unknown function | -1 | 8639 | 8977 |
| APT41146.1 | KX845404_p139 | hypothetical protein | phrog_26001 | unknown function | unknown function | -1 | 116599 | 116868 |
| APT41129.1 | KX845404_p85 | phosphate starvation-inducible protein | phrog_170 | PhoH-like phosphate starvation-inducible | other | -1 | 50474 | 51223 |
| APT41144.1 | KX845404_p134 | receptor-binding protein | phrog_4815 | receptor binding tail protein | tail | -1 | 109900 | 111684 |
| AOZ65458.1 | KX845404_p125 | hypothetical protein | phrog_3725 | tail completion or Neck1 protein | connector | -1 | 102227 | 102988 |
| AOZ65432.1 | KX845404_p100 | NAD-dependent DNA ligase subunit A | phrog_3359 | NAD-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 61614 | 62576 |
| APT41060.1 | KX845404_p14 | hypothetical protein | phrog_26718 | unknown function | unknown function | 1 | 9235 | 9405 |
| AOZ65455.1 | KX845404_p122 | tail fibers protein | phrog_3889 | base plate tail tube protein | tail | -1 | 99694 | 100581 |
| APT41117.1 | KX845404_p71 | cell wall hydrolyse | phrog_938 | endolysin | lysis | -1 | 41285 | 41746 |
| APT41093.1 | KX845404_p47 | hypothetical protein | singleton | unknown function | unknown function | -1 | 27439 | 27576 |
| APT41138.1 | KX845404_p99 | hypothetical protein | singleton | unknown function | unknown function | 1 | 61459 | 61614 |
| AOZ65465.1 | KX845404_p132 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | -1 | 108100 | 109416 |
| AOZ65459.2 | KX845404_p82 | ribonucleotide reductase of class Ia (aerobic), alpha subunit | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | -1 | 47682 | 50006 |
| APT41122.1 | KX845404_p76 | ribonuclease HI | phrog_531 | Rnase H | DNA, RNA and nucleotide metabolism | -1 | 43790 | 44272 |
| APT41086.1 | KX845404_p40 | hypothetical protein | phrog_739 | Rz-like spanin | lysis | -1 | 23676 | 24137 |
| APT41133.1 | KX845404_p90 | hypothetical protein | phrog_2502 | unknown function | unknown function | 1 | 55001 | 55396 |
| APT41131.1 | KX845404_p88 | NAD-dependent protein deacetylase of SIR2 family | phrog_2162 | Sir2 (NAD-dependent deacetylase) | DNA, RNA and nucleotide metabolism | 1 | 53635 | 54468 |
| APT41110.1 | KX845404_p64 | hypothetical protein | phrog_35946 | unknown function | unknown function | -1 | 35714 | 35893 |
| APT41102.1 | KX845404_p56 | hypothetical protein | phrog_3909 | unknown function | unknown function | -1 | 30374 | 30565 |
| APT41149.1 | KX845404_p142 | hypothetical protein | phrog_30254 | unknown function | unknown function | -1 | 118108 | 118224 |
| APT41135.1 | KX845404_p92 | hypothetical protein | singleton | unknown function | unknown function | 1 | 58885 | 59055 |
| AOZ65420.1 | KX845404_p136 | hypothetical protein | phrog_415 | polynucleotide kinase | other | -1 | 113303 | 114019 |
| AOZ65457.2 | KX845404_p81 | ribonucleotide reductase of class Ia (aerobic), beta subunit | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | -1 | 46299 | 47585 |
| APT41053.1 | KX845404_p5 | A2 protein | phrog_1725 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 3723 | 4127 |
| APT41052.1 | KX845404_p4 | hypothetical protein | phrog_26001 | unknown function | unknown function | -1 | 3386 | 3655 |
| APT41150.1 | KX845404_p143 | hypothetical protein | phrog_25172 | unknown function | unknown function | -1 | 118312 | 118479 |
| APT41069.1 | KX845404_p23 | hypothetical protein | phrog_4731 | unknown function | unknown function | -1 | 15424 | 15765 |
| APT41109.1 | KX845404_p63 | hypothetical protein | phrog_4551 | unknown function | unknown function | -1 | 34713 | 34994 |
| APT41090.1 | KX845404_p44 | hypothetical protein | phrog_2855 | unknown function | unknown function | -1 | 26129 | 26452 |
| APT41083.1 | KX845404_p37 | holin | phrog_860 | holin | lysis | -1 | 21235 | 21897 |
| APT41095.1 | KX845404_p49 | hypothetical protein | phrog_21567 | unknown function | unknown function | -1 | 28029 | 28256 |
| APT41101.1 | KX845404_p55 | hypothetical protein | phrog_18736 | unknown function | unknown function | -1 | 29920 | 30219 |
| APT41126.1 | KX845404_p80 | hypothetical protein | phrog_316 | dihydrofolate reductase | DNA, RNA and nucleotide metabolism | -1 | 45736 | 46299 |
| APT41094.1 | KX845404_p48 | 4-hydroxy-3-polyprenylbenzoate decarboxylase | singleton | unknown function | unknown function | -1 | 27674 | 27889 |
| AOZ65421.1 | KX845404_p137 | hypothetical protein | phrog_23888 | unknown function | unknown function | -1 | 114092 | 114544 |
| AOZ65451.1 | KX845404_p118 | hypothetical protein | phrog_1302 | distal tail protein | tail | -1 | 92976 | 93590 |
| APT41156.1 | KX845404_p149 | nucleoside transporter | phrog_26718 | unknown function | unknown function | 1 | 122448 | 122618 |
| APT41121.1 | KX845404_p75 | hypothetical protein | phrog_28824 | unknown function | unknown function | -1 | 43629 | 43790 |
| APT41142.1 | KX845404_p126 | head completion protein | phrog_442 | head-tail adaptor | connector | -1 | 102988 | 103491 |
| AOZ65449.1 | KX845404_p116 | tail fiber protein | phrog_3890 | straight fibre tail protein | tail | -1 | 79708 | 90132 |
| APT41087.1 | KX845404_p41 | hypothetical protein | phrog_4243 | unknown function | unknown function | -1 | 24103 | 24816 |
| APT41066.1 | KX845404_p20 | hypothetical protein | phrog_31383 | unknown function | unknown function | -1 | 14404 | 14730 |
| APT41118.1 | KX845404_p72 | metallopeptidase | phrog_255 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 41811 | 42725 |
| APT41130.1 | KX845404_p87 | hypothetical protein | phrog_20147 | unknown function | unknown function | 1 | 53423 | 53635 |
| APT41134.1 | KX845404_p91 | replication origin binding protein | phrog_3712 | replication origin binding | DNA, RNA and nucleotide metabolism | 1 | 55995 | 58784 |
| APT41100.1 | KX845404_p54 | hypothetical protein | phrog_33238 | unknown function | unknown function | -1 | 29549 | 29929 |
| APT41096.1 | KX845404_p50 | hypothetical protein | phrog_30487 | unknown function | unknown function | -1 | 28243 | 28785 |
| APT41050.1 | KX845404_p2 | hypothetical protein | phrog_23888 | unknown function | unknown function | -1 | 879 | 1331 |
| AOZ65435.1 | KX845404_p103 | replicative DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 64406 | 65854 |
| AOZ65450.1 | KX845404_p117 | tail length tape-measure protein | phrog_31 | central tail fiber J | tail | -1 | 90133 | 92979 |
| APT41071.1 | KX845404_p25 | hypothetical protein | singleton | unknown function | unknown function | -1 | 16007 | 16153 |
| APT41080.1 | KX845404_p34 | thioredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 19594 | 19878 |
| AOZ65464.2 | KX845404_p86 | ribonucleotide reductase of class III (anaerobic), large subunit | phrog_487 | NrdD-like anaerobic ribonucleotide reductase large subunit | moron, auxiliary metabolic gene and host takeover | 1 | 51533 | 53362 |
| APT41136.1 | KX845404_p96 | hypothetical protein | phrog_3696 | unknown function | unknown function | 1 | 60533 | 60778 |
| APT41074.1 | KX845404_p28 | hypothetical protein | phrog_33742 | unknown function | unknown function | -1 | 17167 | 17286 |
| APT41055.1 | KX845404_p7 | hypothetical protein | phrog_30254 | unknown function | unknown function | -1 | 4895 | 5011 |
| APT41151.1 | KX845404_p144 | hypothetical protein | phrog_33736 | unknown function | unknown function | -1 | 119332 | 119514 |
| AOZ65460.1 | KX845404_p127 | major capsid protein | phrog_10 | major head protein | head and packaging | -1 | 103559 | 104941 |
| APT41098.1 | KX845404_p52 | hypothetical protein | phrog_28636 | unknown function | unknown function | -1 | 29061 | 29258 |
| AOZ65433.1 | KX845404_p101 | NDP-dependent DNA ligase subunit B | phrog_3498 | NAD-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 62776 | 63525 |
| AOZ65462.1 | KX845404_p129 | major tail protein | phrog_215 | structural protein with Ig domain | head and packaging | -1 | 105748 | 106218 |
| APT41097.1 | KX845404_p51 | hypothetical protein | phrog_34533 | unknown function | unknown function | -1 | 28788 | 29057 |
| APT41056.1 | KX845404_p8 | hypothetical protein | phrog_25172 | unknown function | unknown function | -1 | 5099 | 5266 |