Genomic map of Arthrobacter phage HumptyDumpty (KX855962)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX855962
Definition
Arthrobacter phage HumptyDumpty, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Radnorvirus; unclassified Radnorvirus.
DB of origin
NUCCORE
Length
69978
Host Name
Arthrobacter sp.
Host domain
Bacteria
Is prophage?
undef
Number of proteins
111
%GC
61.68
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APC44904.1 KX855962_p111 HNH endonuclease phrog_1872 endonuclease DNA, RNA and nucleotide metabolism 1 69584 69922
APC44820.1 KX855962_p25 hypothetical protein phrog_5161 unknown function unknown function 1 21284 21688
APC44837.1 KX855962_p42 hypothetical protein phrog_9274 unknown function unknown function 1 34279 34506
APC44877.1 KX855962_p83 hypothetical protein phrog_8619 unknown function unknown function 1 55852 56424
APC44851.1 KX855962_p56 hypothetical protein phrog_8744 unknown function unknown function 1 41871 42380
APC44905.1 KX855962_p70 hypothetical protein phrog_10249 unknown function unknown function 1 47615 47845
APC44842.1 KX855962_p47 ssDNA binding protein phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 37420 38379
APC44903.1 KX855962_p110 protease domain protein phrog_8478 amidase lysis 1 69049 69600
APC44839.1 KX855962_p44 helix-turn-helix DNA binding domain protein phrog_8615 unknown function unknown function 1 35772 36026
APC44807.1 KX855962_p12 major capsid protein phrog_1650 major head protein head and packaging 1 9680 10576
APC44864.1 KX855962_p69 hypothetical protein phrog_8388 unknown function unknown function 1 47167 47592
APC44857.1 KX855962_p62 hypothetical protein phrog_7014 unknown function unknown function 1 44665 44814
APC44893.1 KX855962_p100 HNH endonuclease phrog_826 HNH endonuclease DNA, RNA and nucleotide metabolism 1 63534 64028
APC44852.1 KX855962_p57 hypothetical protein phrog_8331 unknown function unknown function 1 42373 42768
APC44867.1 KX855962_p73 hypothetical protein phrog_8686 unknown function unknown function 1 48737 49294
APC44806.1 KX855962_p11 capsid decoration protein phrog_673 head scaffolding protein head and packaging 1 9275 9655
APC44890.1 KX855962_p96 hypothetical protein phrog_8648 unknown function unknown function 1 62301 62498
APC44829.1 KX855962_p34 hypothetical protein phrog_9234 unknown function unknown function -1 28950 29111
APC44888.1 KX855962_p94 hypothetical protein phrog_9161 unknown function unknown function 1 61627 61908
APC44885.1 KX855962_p91 hypothetical protein phrog_8377 unknown function unknown function 1 60463 60675
APC44856.1 KX855962_p61 hypothetical protein phrog_8799 unknown function unknown function 1 43689 44675
APC44881.1 KX855962_p87 hypothetical protein phrog_8410 unknown function unknown function 1 57636 57935
APC44831.1 KX855962_p36 hypothetical protein phrog_8361 unknown function unknown function -1 29550 30104
APC44799.1 KX855962_p4 portal protein phrog_113 portal protein head and packaging 1 2813 4237
APC44876.1 KX855962_p82 DNA methylase phrog_67 DNA methyltransferase other 1 53872 55794
APC44874.1 KX855962_p80 cytosine DNA methylase phrog_363 DNA methyltransferase other 1 51699 52556
APC44830.1 KX855962_p35 hypothetical protein phrog_9254 unknown function unknown function -1 29206 29517
APC44841.1 KX855962_p46 endonuclease phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 36470 37423
APC44823.1 KX855962_p28 hypothetical protein phrog_4565 unknown function unknown function 1 25642 25932
APC44870.1 KX855962_p76 hypothetical protein phrog_9855 unknown function unknown function 1 49686 49883
APC44895.1 KX855962_p102 hypothetical protein phrog_8556 unknown function unknown function 1 64868 65593
APC44891.1 KX855962_p97 hypothetical protein phrog_6641 secreted protein other 1 62495 62878
APC44872.1 KX855962_p78 hypothetical protein phrog_8725 unknown function unknown function 1 50473 51231
APC44812.1 KX855962_p17 hypothetical protein phrog_8507 unknown function unknown function 1 12614 12895
APC44875.1 KX855962_p81 DNA methyltransferase domain protein phrog_1008 DNA methyltransferase other 1 52519 53796
APC44868.1 KX855962_p74 hypothetical protein phrog_9127 unknown function unknown function 1 49281 49448
APC44805.1 KX855962_p10 capsid maturation protease phrog_3894 head maturation protease head and packaging 1 7817 9271
APC44894.1 KX855962_p101 ssDNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 64018 64587
APC44882.1 KX855962_p88 hypothetical protein phrog_8675 unknown function unknown function 1 57996 58319
APC44833.1 KX855962_p38 baseplate wedge protein phrog_5026 baseplate protein tail 1 30495 30833
APC44822.1 KX855962_p27 tail protein phrog_5231 unknown function unknown function 1 23708 25645
APC44861.1 KX855962_p66 hypothetical protein phrog_8876 unknown function unknown function 1 45452 45640
APC44879.1 KX855962_p85 hypothetical protein phrog_8751 unknown function unknown function 1 56845 57204
APC44840.1 KX855962_p45 hypothetical protein phrog_8731 unknown function unknown function 1 36051 36473
APC44847.1 KX855962_p52 hypothetical protein phrog_8385 unknown function unknown function 1 40043 40402
APC44887.1 KX855962_p93 hypothetical protein phrog_8528 unknown function unknown function 1 61024 61623
APC44860.1 KX855962_p65 hypothetical protein phrog_7014 unknown function unknown function 1 45295 45468
APC44878.1 KX855962_p84 hypothetical protein phrog_8502 unknown function unknown function 1 56421 56858
APC44900.1 KX855962_p107 hypothetical protein phrog_8530 unknown function unknown function 1 68063 68455
APC44855.1 KX855962_p60 hypothetical protein phrog_8413 unknown function unknown function 1 43449 43688
APC44902.1 KX855962_p109 hypothetical protein phrog_9617 unknown function unknown function 1 68727 69020
APC44854.1 KX855962_p59 hypothetical protein phrog_8327 unknown function unknown function 1 42953 43456
APC44800.1 KX855962_p5 capsid morphogenesis protein phrog_595 head maturation protease head and packaging 1 4243 6222
APC44899.1 KX855962_p106 hypothetical protein phrog_8795 unknown function unknown function 1 67643 67990
APC44825.1 KX855962_p30 hypothetical protein phrog_5480 unknown function unknown function 1 26144 26548
APC44863.1 KX855962_p68 hypothetical protein phrog_4657 unknown function unknown function 1 46316 47170
APC44849.1 KX855962_p54 hypothetical protein phrog_8694 unknown function unknown function 1 41112 41576
APC44824.1 KX855962_p29 hypothetical protein phrog_5303 unknown function unknown function 1 25929 26147
APC44810.1 KX855962_p15 minor tail protein phrog_26 tail completion or Neck1 protein connector 1 11508 11978
APC44853.1 KX855962_p58 hypothetical protein phrog_2864 unknown function unknown function 1 42765 42956
APC44889.1 KX855962_p95 resolvase phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 61895 62308
APC44883.1 KX855962_p89 endonuclease phrog_5928 unknown function unknown function 1 58350 58724
APC44808.1 KX855962_p13 hypothetical protein phrog_8546 unknown function unknown function 1 10579 10980
APC44804.1 KX855962_p9 hypothetical protein phrog_8348 unknown function unknown function 1 7427 7810
APC44862.1 KX855962_p67 hypothetical protein phrog_9166 unknown function unknown function 1 45777 46319
APC44880.1 KX855962_p86 hypothetical protein phrog_9063 unknown function unknown function 1 57197 57646
APC44821.1 KX855962_p26 tail protein phrog_5207 unknown function unknown function 1 21685 23655
APC44815.1 KX855962_p20 hypothetical protein phrog_5088 tail assembly chaperone tail 1 14906 15529
APC44801.1 KX855962_p6 immunity protein domain phrog_3585 immunity protein other 1 6253 6579
APC44897.1 KX855962_p104 DNA polymerase III subunit beta phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism 1 65933 67048
APC44798.1 KX855962_p3 terminase phrog_2 terminase large subunit head and packaging 1 1291 2769
APC44901.1 KX855962_p108 helix-turn-helix DNA binding domain protein phrog_7351 unknown function unknown function 1 68579 68722
APC44835.1 KX855962_p40 hypothetical protein phrog_7455 tail protein tail 1 31957 33822
APC44906.1 KX855962_p98 hypothetical protein phrog_17294 unknown function unknown function 1 63024 63287
APC44834.1 KX855962_p39 baseplate J-like protein phrog_6 baseplate wedge subunit tail 1 30826 31947
APC44844.1 KX855962_p49 hypothetical protein phrog_9387 unknown function unknown function 1 38569 38835
APC44865.1 KX855962_p71 hypothetical protein phrog_8715 unknown function unknown function 1 47859 48287
APC44826.1 KX855962_p31 endolysin phrog_291 endolysin lysis 1 26545 28200
APC44811.1 KX855962_p16 hypothetical protein phrog_5178 unknown function unknown function 1 11978 12595
APC44869.1 KX855962_p75 hypothetical protein phrog_9916 unknown function unknown function 1 49445 49681
APC44828.1 KX855962_p33 hypothetical protein phrog_1933 unknown function unknown function -1 28739 28957
APC44858.1 KX855962_p63 hypothetical protein phrog_13067 unknown function unknown function 1 44804 44905
APC44816.1 KX855962_p21 hypothetical protein phrog_8820 unknown function unknown function 1 15574 15711
APC44832.1 KX855962_p37 helix-turn-helix DNA binding domain protein phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism -1 30165 30383
APC44848.1 KX855962_p53 hypothetical protein phrog_8739 unknown function unknown function 1 40399 41115
APC44827.1 KX855962_p32 holin phrog_8269 holin lysis 1 28215 28685
APC44797.1 KX855962_p2 hypothetical protein phrog_645 Rnase E DNA, RNA and nucleotide metabolism 1 657 1310
APC44896.1 KX855962_p103 hypothetical protein phrog_8433 unknown function unknown function 1 65681 65920
APC44898.1 KX855962_p105 hypothetical protein phrog_5845 unknown function unknown function 1 67200 67646
APC44809.1 KX855962_p14 hypothetical protein phrog_5280 unknown function unknown function 1 11001 11504
APC44859.1 KX855962_p64 hypothetical protein phrog_9156 unknown function unknown function 1 44902 45264
APC44871.1 KX855962_p77 hypothetical protein phrog_8606 unknown function unknown function 1 49880 50476
APC44886.1 KX855962_p92 nucleotidyl transferase phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 60665 61027
APC44884.1 KX855962_p90 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 58721 60466
APC44850.1 KX855962_p55 hypothetical protein phrog_9663 unknown function unknown function 1 41680 41856
APC44846.1 KX855962_p51 hypothetical protein phrog_3926 replication initiation protein DNA, RNA and nucleotide metabolism 1 39217 39735
APC44803.1 KX855962_p8 hypothetical protein phrog_10034 unknown function unknown function 1 6965 7420
APC44802.1 KX855962_p7 hypothetical protein phrog_9140 unknown function unknown function 1 6723 6953
APC44843.1 KX855962_p48 hypothetical protein phrog_9097 unknown function unknown function 1 38414 38566
APC44873.1 KX855962_p79 hypothetical protein phrog_6326 unknown function unknown function 1 51228 51620
APC44813.1 KX855962_p18 tail sheath protein phrog_23 tail sheath tail 1 12899 14347
APC44796.1 KX855962_p1 hypothetical protein phrog_5264 unknown function unknown function 1 1 660
APC44838.1 KX855962_p43 DNA repair protein phrog_1499 unknown function unknown function 1 34534 35769
APC44817.1 KX855962_p22 tape measure protein phrog_58 tail length tape measure protein tail 1 15721 19263
APC44818.1 KX855962_p23 LysM-like endolysin phrog_380 endolysin lysis 1 19264 19932
APC44866.1 KX855962_p72 endolysin domain protein phrog_8605 endolysin lysis 1 48280 48747
APC44892.1 KX855962_p99 hypothetical protein phrog_9956 unknown function unknown function 1 63161 63544
APC44814.1 KX855962_p19 tail tube protein phrog_5102 tail tube protein tail 1 14370 14774
APC44819.1 KX855962_p24 tail protein phrog_52 tail protein tail 1 19938 21281
APC44845.1 KX855962_p50 hypothetical protein phrog_8370 unknown function unknown function 1 38832 39149
APC44836.1 KX855962_p41 hypothetical protein phrog_9333 unknown function unknown function 1 34043 34282