Genomic map of Streptococcus phage CHPC926 (KX879642)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX879642
Definition
Streptococcus phage CHPC926, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
30077
Host Name
Streptococcus thermophilus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
44
%GC
37.02
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APC45844.1 KX879642_p22 endonuclease phrog_9496 endonuclease DNA, RNA and nucleotide metabolism 1 17683 17847
APC45841.1 KX879642_p19 transcription termination factor phrog_4257 unknown function unknown function 1 16197 16613
APC45830.1 KX879642_p8 hypothetical protein phrog_132 head-tail adaptor connector 1 5669 6001
APC45832.1 KX879642_p10 capsid and scaffold protein phrog_5 tail completion or Neck1 protein connector 1 6306 6632
APC45850.1 KX879642_p28 hypothetical protein phrog_1022 unknown function unknown function 1 21196 21336
APC45826.1 KX879642_p4 minor capsid protein phrog_115 minor head protein head and packaging 1 2760 3803
APC45842.1 KX879642_p20 holin phrog_297 holin lysis 1 16630 16872
APC45845.1 KX879642_p23 lysin phrog_4238 endolysin lysis 1 18011 18238
APC45825.1 KX879642_p3 portal protein phrog_64 portal protein head and packaging 1 1416 2756
APC45862.1 KX879642_p40 DNA-binding protein phrog_715 MazG-like pyrophosphatase other 1 27106 27456
APC45866.1 KX879642_p44 hypothetical protein phrog_309 terminase small subunit head and packaging 1 29545 30027
APC45859.1 KX879642_p37 hypothetical protein phrog_803 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 26350 26523
APC45858.1 KX879642_p36 hypothetical protein phrog_1982 unknown function unknown function 1 26123 26359
APC45855.1 KX879642_p33 hypothetical protein phrog_1227 exonuclease DNA, RNA and nucleotide metabolism 1 24359 25195
APC45848.1 KX879642_p26 antirepressor protein phrog_2902 anti-repressor transcription regulation 1 20289 20831
APC45864.1 KX879642_p42 hypothetical protein phrog_1814 unknown function unknown function 1 27730 28437
APC45847.1 KX879642_p25 hypothetical protein phrog_1733 unknown function unknown function 1 19352 20296
APC45857.1 KX879642_p35 holliday junction resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 25665 26126
APC45823.1 KX879642_p1 terminase small subunit phrog_8148 terminase small subunit head and packaging 1 12 206
APC45861.1 KX879642_p39 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision 1 26710 27093
APC45851.1 KX879642_p29 replication initiation protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 21562 22425
APC45827.1 KX879642_p5 capsid and scaffold protein phrog_2932 head scaffolding protein head and packaging 1 3920 4519
APC45834.1 KX879642_p12 tail protein phrog_238 major tail protein tail 1 7029 7526
APC45831.1 KX879642_p9 hypothetical protein phrog_348 minor head protein head and packaging 1 5998 6309
APC45833.1 KX879642_p11 capsid and scaffold protein phrog_176 tail terminator connector 1 6629 7018
APC45824.1 KX879642_p2 terminase large subunit phrog_38 terminase large subunit head and packaging 1 282 1415
APC45854.1 KX879642_p32 recombinase phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 23539 24366
APC45829.1 KX879642_p7 major tail protein phrog_215 structural protein with Ig domain head and packaging 1 5464 5655
APC45865.1 KX879642_p43 hypothetical protein phrog_248 transcriptional activator transcription regulation 1 28917 29366
APC45849.1 KX879642_p27 transcriptional regulator phrog_3 transcriptional repressor transcription regulation 1 20953 21162
APC45839.1 KX879642_p17 hypothetical protein phrog_1067 minor head protein head and packaging 1 11345 14077
APC45860.1 KX879642_p38 hypothetical protein phrog_1489 unknown function unknown function 1 26520 26672
APC45836.1 KX879642_p14 hypothetical protein phrog_441 tail assembly chaperone tail 1 8076 8345
APC45856.1 KX879642_p34 single-stranded DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 25210 25656
APC45843.1 KX879642_p21 lysin phrog_998 endolysin lysis 1 16874 17476
APC45835.1 KX879642_p13 hypothetical protein phrog_183 tail chaperone protein tail 1 7642 7992
APC45863.1 KX879642_p41 hypothetical protein phrog_13906 unknown function unknown function 1 27581 27733
APC45837.1 KX879642_p15 tape-measure protein phrog_58 tail length tape measure protein tail 1 8361 10574
APC45828.1 KX879642_p6 major capsid protein phrog_840 major head protein head and packaging 1 4535 5398
APC45853.1 KX879642_p31 hypothetical protein phrog_3159 unknown function unknown function 1 23217 23414
APC45846.1 KX879642_p24 cro-like protein phrog_3 transcriptional repressor transcription regulation 1 19108 19311
APC45838.1 KX879642_p16 capsid and scaffold protein phrog_33 distal tail protein Dit tail 1 10584 11345
APC45852.1 KX879642_p30 DNA helicase loader phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 22438 23220
APC45840.1 KX879642_p18 upper baseplate protein phrog_15175 virion structural protein head and packaging 1 14089 16032