Genomic map of Bordetella virus LK3 (KX961385)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX961385
Definition
Bordetella virus LK3, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Vojvodinavirus; unclassified Vojvodinavirus.
DB of origin
NUCCORE
Length
59831
Host Name
Bordetella bronchiseptica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
78
%GC
63.92
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APL99061.1 KX961385_p1 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 727 2472
APL99076.1 KX961385_p16 thymidylate synthase/deoxyuridylate hydroxymethyltransferase phrog_5131 thymidylate synthase DNA, RNA and nucleotide metabolism 1 15445 16509
APL99138.1 KX961385_p78 F5/8 type C domain protein phrog_10304 virion structural protein head and packaging 1 59115 59750
APL99131.1 KX961385_p71 tail length tape measure protein phrog_3336 tail length tape measure protein tail 1 49734 52553
APL99064.1 KX961385_p4 hypothetical protein phrog_2402 unknown function unknown function 1 3660 4490
APL99077.1 KX961385_p17 5'-deoxynucleotidase phrog_6047 unknown function unknown function 1 16502 17083
APL99129.1 KX961385_p69 tail chaperonin phrog_3817 tail chaperonin tail 1 49035 49301
APL99115.1 KX961385_p55 minor structural protein phrog_241 head morphogenesis head and packaging 1 39114 40322
APL99090.1 KX961385_p30 hypothetical protein phrog_8938 unknown function unknown function 1 25998 26258
APL99120.1 KX961385_p60 hypothetical protein phrog_8884 unknown function unknown function 1 43778 43948
APL99069.1 KX961385_p9 hypothetical protein phrog_6364 unknown function unknown function 1 9782 10642
APL99107.1 KX961385_p47 hypothetical protein phrog_6596 unknown function unknown function 1 33367 33789
APL99073.1 KX961385_p13 triphosphate hydrolase phrog_800 terminase small subunit head and packaging 1 13262 13828
APL99135.1 KX961385_p75 tail assembly protein phrog_1196 tail assembly chaperone tail 1 55370 55576
APL99132.1 KX961385_p72 structural protein phrog_1082 tail assembly protein tail 1 52540 53727
APL99068.1 KX961385_p8 hypothetical protein phrog_7790 unknown function unknown function 1 8796 9716
APL99105.1 KX961385_p45 hypothetical protein phrog_8760 unknown function unknown function 1 32901 33113
APL99118.1 KX961385_p58 hypothetical protein phrog_14870 unknown function unknown function 1 42362 43126
APL99094.1 KX961385_p34 hypothetical protein phrog_9190 unknown function unknown function 1 27643 27951
APL99113.1 KX961385_p53 structural protein phrog_145 portal protein head and packaging 1 37512 39020
APL99112.1 KX961385_p52 terminase large subunit phrog_2 terminase large subunit head and packaging 1 35885 37453
APL99079.1 KX961385_p19 DNA polymerase A phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 17634 19616
APL99063.1 KX961385_p3 hypothetical protein phrog_2378 unknown function unknown function 1 2899 3453
APL99096.1 KX961385_p36 RNA polymerase-binding protein phrog_54 DksA-like zinc-finger protein other 1 28794 28985
APL99130.1 KX961385_p70 virion structural protein phrog_169 tail completion or Neck1 protein connector 1 49285 49731
APL99092.1 KX961385_p32 hypothetical protein phrog_7569 unknown function unknown function 1 26863 27339
APL99123.1 KX961385_p63 endolysin phrog_669 endolysin lysis 1 44845 45585
APL99100.1 KX961385_p40 DNA binding domain protein phrog_3628 unknown function unknown function 1 29999 30883
APL99109.1 KX961385_p49 hypothetical protein phrog_8564 unknown function unknown function 1 33992 34201
APL99091.1 KX961385_p31 pyrophosphatase phrog_9147 unknown function unknown function 1 26255 26866
APL99133.1 KX961385_p73 virion structural protein phrog_15205 tail assembly protein tail 1 53724 55127
APL99101.1 KX961385_p41 diguanylate-cyclase GGDEF domain protein phrog_5594 unknown function unknown function 1 30887 31357
APL99078.1 KX961385_p18 hypothetical protein phrog_5839 unknown function unknown function 1 17245 17634
APL99081.1 KX961385_p21 deoxycytidylate deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 19927 20589
APL99102.1 KX961385_p42 transcription elongation protein phrog_6361 unknown function unknown function 1 31442 32047
APL99088.1 KX961385_p28 hypothetical protein phrog_8203 unknown function unknown function 1 24446 25630
APL99104.1 KX961385_p44 hypothetical protein phrog_10108 unknown function unknown function 1 32549 32878
APL99099.1 KX961385_p39 hypothetical protein singleton unknown function unknown function 1 29827 29979
APL99124.1 KX961385_p64 structural protein phrog_477 head-tail adaptor Ad1 connector 1 45576 46094
APL99086.1 KX961385_p26 hypothetical protein phrog_17845 unknown function unknown function 1 23998 24216
APL99110.1 KX961385_p50 nucleotide pyrophosphohydrolase phrog_671 nucleotide pyrophosphohydrolase other 1 34198 34731
APL99084.1 KX961385_p24 integrase phrog_1829 DNA primase DNA, RNA and nucleotide metabolism 1 21293 23719
APL99127.1 KX961385_p67 major structural protein phrog_290 minor tail protein tail 1 46957 48492
APL99093.1 KX961385_p33 hypothetical protein phrog_9341 unknown function unknown function 1 27350 27640
APL99125.1 KX961385_p65 structural protein phrog_161 head closure Hc1 connector 1 46096 46464
APL99126.1 KX961385_p66 structural protein phrog_179 tail terminator connector 1 46461 46916
APL99083.1 KX961385_p23 repressor phrog_3 transcriptional repressor transcription regulation 1 20977 21291
APL99062.1 KX961385_p2 hypothetical protein phrog_5888 unknown function unknown function 1 2469 2831
APL99065.1 KX961385_p5 ATP-binding protein phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism 1 4563 5762
APL99098.1 KX961385_p38 hypothetical protein phrog_8020 unknown function unknown function 1 29393 29725
APL99080.1 KX961385_p20 DNA primase phrog_8389 unknown function unknown function 1 19613 19930
APL99137.1 KX961385_p77 coagulation factor 5/8 type domain protein phrog_10304 virion structural protein head and packaging 1 58447 59064
APL99082.1 KX961385_p22 hypothetical protein phrog_2165 DNA helicase DNA, RNA and nucleotide metabolism 1 20582 20980
APL99122.1 KX961385_p62 holin phrog_8226 holin lysis 1 44513 44860
APL99089.1 KX961385_p29 hypothetical protein phrog_9297 unknown function unknown function 1 25627 25983
APL99067.1 KX961385_p7 ribonucleotide-diphosphate reductase subunit beta phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 7606 8577
APL99071.1 KX961385_p11 threonine dehydratase phrog_7093 threonine dehydratase other 1 10866 11711
APL99134.1 KX961385_p74 virion structural protein phrog_1180 tail assembly chaperone tail 1 55140 55373
APL99085.1 KX961385_p25 hypothetical protein phrog_2053 unknown function unknown function 1 23731 23943
APL99111.1 KX961385_p51 terminase small subunit phrog_4044 terminase small subunit head and packaging 1 35373 35885
APL99117.1 KX961385_p57 major structural protein phrog_212 major head protein head and packaging 1 41341 42273
APL99106.1 KX961385_p46 hypothetical protein phrog_6858 unknown function unknown function 1 33110 33370
APL99121.1 KX961385_p61 Rz protein phrog_1327 Rz-like spanin lysis 1 43950 44516
APL99075.1 KX961385_p15 hypothetical protein phrog_1965 unknown function unknown function 1 14868 15431
APL99072.1 KX961385_p12 DNA repair photolyase phrog_9252 DNA repair photolyase DNA, RNA and nucleotide metabolism 1 11782 13236
APL99097.1 KX961385_p37 hypothetical protein phrog_15793 unknown function unknown function 1 29072 29335
APL99119.1 KX961385_p59 hypothetical protein phrog_6213 unknown function unknown function 1 43149 43742
APL99066.1 KX961385_p6 ribonucleotide-diphosphate reductase subunit alpha phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 5915 7609
APL99114.1 KX961385_p54 hypothetical protein phrog_9943 unknown function unknown function 1 39017 39130
APL99136.1 KX961385_p76 virion structural protein phrog_1101 tail protein tail 1 55617 58370
APL99116.1 KX961385_p56 structural protein phrog_206 head scaffolding protein head and packaging 1 40386 41150
APL99095.1 KX961385_p35 ribonuclease T phrog_255 exonuclease DNA, RNA and nucleotide metabolism 1 28232 28801
APL99087.1 KX961385_p27 hypothetical protein phrog_8293 unknown function unknown function 1 24221 24418
APL99103.1 KX961385_p43 antirestriction protein phrog_10132 anti-restriction protein moron, auxiliary metabolic gene and host takeover 1 32077 32490
APL99070.1 KX961385_p10 hypothetical protein phrog_7696 unknown function unknown function 1 10639 10869
APL99128.1 KX961385_p68 structural protein phrog_313 Tail assembly chaperone tail 1 48553 49011
APL99108.1 KX961385_p48 hypothetical protein phrog_18256 unknown function unknown function 1 33786 33992
APL99074.1 KX961385_p14 hypothetical protein phrog_2396 unknown function unknown function 1 13828 14841