Genomic map of Alteromonas phage PB15 (KX982260)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX982260
Definition
Alteromonas phage PB15, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
37333
Host Name
Alteromonas gracilis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
61
%GC
45.52
Number of singletons
26
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APC46552.1 KX982260_p30 hypothetical protein phrog_268 unknown function unknown function -1 16806 16991
APC46536.1 KX982260_p14 gene transfer agent prohead protease phrog_80 head maturation protease head and packaging -1 8786 9409
APC46564.1 KX982260_p42 multimodular transpeptidase-transglycosylase phrog_2300 unknown function unknown function 1 23406 23888
APC46531.1 KX982260_p9 hypothetical protein phrog_13935 unknown function unknown function -1 5424 5972
APC46559.1 KX982260_p37 hypothetical protein phrog_757 DNA methyltransferase other -1 18948 19538
APC46554.1 KX982260_p32 hypothetical protein phrog_31492 unknown function unknown function -1 17347 17598
APC46574.1 KX982260_p52 hypothetical protein phrog_1273 unknown function unknown function 1 29274 29588
APC46546.1 KX982260_p24 hypothetical protein singleton unknown function unknown function -1 14462 15526
APC46581.1 KX982260_p59 cell wall surface anchor family protein singleton unknown function unknown function -1 31907 34153
APC46582.1 KX982260_p60 PE family protein phrog_11439 tail fiber protein tail -1 34153 36348
APC46573.1 KX982260_p51 hypothetical protein singleton unknown function unknown function 1 29138 29272
APC46530.1 KX982260_p8 head-tail adaptor phrog_25 head closure Hc1 connector -1 5089 5427
APC46527.1 KX982260_p5 major tail protein phrog_1407 major tail protein tail -1 3819 4217
APC46561.1 KX982260_p39 transcriptional regulator phrog_35 transcriptional repressor transcription regulation -1 21975 22217
APC46553.1 KX982260_p31 protein ninX phrog_444 unknown function unknown function -1 16985 17347
APC46566.1 KX982260_p44 YqaJ-like viral recombinase domain-containing protein phrog_1990 Cas4-domain exonuclease DNA, RNA and nucleotide metabolism 1 24352 25317
APC46549.1 KX982260_p27 hypothetical protein singleton unknown function unknown function -1 16058 16210
APC46550.1 KX982260_p28 hypothetical protein singleton unknown function unknown function -1 16210 16437
APC46525.1 KX982260_p3 hypothetical protein singleton unknown function unknown function -1 3210 3401
APC46562.1 KX982260_p40 ATPase phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 22345 23025
APC46563.1 KX982260_p41 hypothetical protein phrog_2480 unknown function unknown function 1 23018 23401
APC46538.1 KX982260_p16 hypothetical protein singleton unknown function unknown function 1 9677 9847
APC46569.1 KX982260_p47 VRR-NUC domain-containing protein phrog_824 unknown function unknown function 1 27240 27593
APC46544.1 KX982260_p22 hypothetical protein singleton unknown function unknown function -1 13780 14175
APC46523.1 KX982260_p1 hypothetical protein singleton unknown function unknown function 1 754 1284
APC46542.1 KX982260_p20 terminase phrog_2 terminase large subunit head and packaging -1 12148 13293
APC46547.1 KX982260_p25 hypothetical protein singleton unknown function unknown function -1 15523 15765
APC46570.1 KX982260_p48 dUTP diphosphatase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 27601 28041
APC46534.1 KX982260_p12 pathogenesis-related transcriptional factor and ERF protein phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 6954 7493
APC46565.1 KX982260_p43 hypothetical protein singleton unknown function unknown function 1 23930 24352
APC46579.1 KX982260_p57 hypothetical protein phrog_937 hemolysin other -1 30928 31233
APC46539.1 KX982260_p17 hypothetical protein singleton unknown function unknown function 1 9844 10056
APC46541.1 KX982260_p19 gene transfer agent portal protein phrog_12 portal protein head and packaging -1 10817 12100
APC46560.1 KX982260_p38 TOPRIM domain-containing protein phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism -1 19990 21972
APC46583.1 KX982260_p61 hypothetical protein phrog_11633 unknown function unknown function -1 36348 37226
APC46524.1 KX982260_p2 tail length tape-measure protein 1 phrog_9483 tail length tape measure protein tail -1 1267 3219
APC46578.1 KX982260_p56 response regulator phrog_5982 unknown function unknown function -1 30533 30910
APC46535.1 KX982260_p13 major capsid protein phrog_10 major head protein head and packaging -1 7524 8759
APC46537.1 KX982260_p15 hypothetical protein singleton unknown function unknown function 1 9534 9680
APC46533.1 KX982260_p11 hypothetical protein singleton unknown function unknown function -1 6617 6796
APC46558.1 KX982260_p36 hypothetical protein singleton unknown function unknown function -1 18646 18876
APC46575.1 KX982260_p53 hypothetical protein singleton unknown function unknown function 1 29590 29754
APC46532.1 KX982260_p10 gene transfer agent protein phrog_442 head-tail adaptor connector -1 6029 6616
APC46545.1 KX982260_p23 hypothetical protein singleton unknown function unknown function -1 14172 14462
APC46551.1 KX982260_p29 hypothetical protein singleton unknown function unknown function -1 16574 16813
APC46528.1 KX982260_p6 hypothetical protein phrog_176 tail terminator connector -1 4221 4643
APC46576.1 KX982260_p54 hypothetical protein phrog_3427 holin lysis -1 29777 30178
APC46543.1 KX982260_p21 small terminase phrog_309 terminase small subunit head and packaging -1 13340 13705
APC46557.1 KX982260_p35 hypothetical protein singleton unknown function unknown function -1 18491 18649
APC46572.1 KX982260_p50 hypothetical protein singleton unknown function unknown function 1 28802 28963
APC46577.1 KX982260_p55 carboxypeptidase phrog_894 endolysin lysis -1 30180 30536
APC46571.1 KX982260_p49 hypothetical protein singleton unknown function unknown function 1 28253 28576
APC46580.1 KX982260_p58 hypothetical protein singleton unknown function unknown function -1 31251 31718
APC46567.1 KX982260_p45 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 25321 26919
APC46568.1 KX982260_p46 hypothetical protein phrog_31018 unknown function unknown function 1 26900 27271
APC46548.1 KX982260_p26 hypothetical protein singleton unknown function unknown function -1 15879 16061
APC46529.1 KX982260_p7 tail assembly protein phrog_5 tail completion or Neck1 protein connector -1 4640 5092
APC46556.1 KX982260_p34 hypothetical protein singleton unknown function unknown function -1 17857 18498
APC46540.1 KX982260_p18 minor capsid protein phrog_2468 head morphogenesis head and packaging -1 10048 10827
APC46555.1 KX982260_p33 hypothetical protein singleton unknown function unknown function -1 17589 17789
APC46526.1 KX982260_p4 hypothetical protein singleton unknown function unknown function -1 3431 3817