| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY000083 |
Definition |
Pseudomonas phage PA10, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Pakpunavirus; Pseudomonas virus PA10. |
DB of origin |
NUCCORE |
Length |
91212 |
Host Name |
Pseudomonas aeruginosa |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
127 |
%GC |
49.3 |
Number of singletons |
14 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD20833.1 | KY000083_p34 | hypothetical protein | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 24922 | 25869 |
| APD20881.1 | KY000083_p82 | ribose-phosphate pyrophosphokinase | phrog_619 | ribose-phosphate pyrophosphokinase | other | -1 | 54557 | 55423 |
| APD20918.1 | KY000083_p119 | hypothetical protein | phrog_4625 | unknown function | unknown function | 1 | 81439 | 81591 |
| APD20802.1 | KY000083_p3 | peptidoglycan binding protein | phrog_2860 | endolysin | head and packaging | 1 | 2081 | 2641 |
| APD20904.1 | KY000083_p105 | hypothetical protein | singleton | unknown function | unknown function | 1 | 67402 | 67557 |
| APD20831.1 | KY000083_p32 | hypothetical protein | phrog_7016 | unknown function | unknown function | 1 | 23560 | 23772 |
| APD20888.1 | KY000083_p89 | hypothetical protein | phrog_990 | metal-dependent phosphohydrolase | other | -1 | 58694 | 59254 |
| APD20867.1 | KY000083_p68 | hypothetical protein | phrog_4310 | unknown function | unknown function | 1 | 43957 | 44151 |
| APD20804.1 | KY000083_p5 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3598 | 3765 |
| APD20907.1 | KY000083_p108 | capsid and scaffold protein | phrog_1530 | DNA methyltransferase | other | 1 | 73221 | 73691 |
| APD20909.1 | KY000083_p110 | hypothetical protein | phrog_49 | head decoration | head and packaging | 1 | 74633 | 75043 |
| APD20854.1 | KY000083_p55 | hypothetical protein | phrog_2554 | unknown function | unknown function | 1 | 37051 | 37722 |
| APD20813.1 | KY000083_p14 | hypothetical protein | phrog_6917 | unknown function | unknown function | 1 | 9644 | 9808 |
| APD20896.1 | KY000083_p97 | hypothetical protein | phrog_6991 | unknown function | unknown function | -1 | 63688 | 63966 |
| APD20807.1 | KY000083_p8 | hypothetical protein | phrog_7461 | unknown function | unknown function | -1 | 5610 | 5765 |
| APD20817.1 | KY000083_p18 | primase/helicase protein | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 11450 | 13312 |
| APD20811.1 | KY000083_p12 | hypothetical protein | phrog_4256 | unknown function | unknown function | 1 | 8606 | 8995 |
| APD20830.1 | KY000083_p31 | hypothetical protein | phrog_6971 | unknown function | unknown function | 1 | 23221 | 23556 |
| APD20874.1 | KY000083_p75 | hypothetical protein | phrog_6932 | unknown function | unknown function | -1 | 50463 | 50840 |
| APD20860.1 | KY000083_p61 | hypothetical protein | phrog_3303 | unknown function | unknown function | 1 | 40231 | 40812 |
| APD20889.1 | KY000083_p90 | hypothetical protein | phrog_2686 | unknown function | unknown function | -1 | 59874 | 60338 |
| APD20894.1 | KY000083_p95 | hypothetical protein | phrog_374 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 62699 | 63358 |
| APD20845.1 | KY000083_p46 | hypothetical protein | phrog_6076 | unknown function | unknown function | 1 | 31743 | 31943 |
| APD20852.1 | KY000083_p53 | hypothetical protein | phrog_2267 | unknown function | unknown function | 1 | 35827 | 36135 |
| APD20857.1 | KY000083_p58 | hypothetical protein | phrog_6913 | unknown function | unknown function | 1 | 39204 | 39428 |
| APD20895.1 | KY000083_p96 | hypothetical protein | phrog_3948 | unknown function | unknown function | -1 | 63360 | 63707 |
| APD20837.1 | KY000083_p38 | hypothetical protein | phrog_343 | unknown function | unknown function | 1 | 29248 | 29475 |
| APD20812.1 | KY000083_p13 | hypothetical protein | phrog_7101 | unknown function | unknown function | 1 | 8992 | 9657 |
| APD20843.1 | KY000083_p44 | hypothetical protein | phrog_6846 | unknown function | unknown function | 1 | 31245 | 31439 |
| APD20910.1 | KY000083_p111 | hypothetical protein | phrog_29 | major head protein | head and packaging | 1 | 75087 | 76121 |
| APD20863.1 | KY000083_p64 | hypothetical protein | phrog_6605 | unknown function | unknown function | 1 | 42649 | 42861 |
| APD20925.1 | KY000083_p126 | hypothetical protein | phrog_587 | structural protein | head and packaging | 1 | 88592 | 89323 |
| APD20828.1 | KY000083_p29 | hypothetical protein | phrog_7135 | unknown function | unknown function | 1 | 22799 | 22981 |
| APD20850.1 | KY000083_p51 | hypothetical protein | phrog_5289 | unknown function | unknown function | 1 | 35395 | 35628 |
| APD20826.1 | KY000083_p27 | hypothetical protein | phrog_7013 | unknown function | unknown function | 1 | 21398 | 21859 |
| APD20818.1 | KY000083_p19 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 13373 | 16087 |
| APD20877.1 | KY000083_p78 | hypothetical protein | phrog_335 | phosphatase | other | -1 | 51912 | 52391 |
| APD20876.1 | KY000083_p77 | hypothetical protein | phrog_6391 | unknown function | unknown function | -1 | 51751 | 51900 |
| APD20849.1 | KY000083_p50 | hypothetical protein | phrog_6871 | unknown function | unknown function | 1 | 35096 | 35383 |
| APD20922.1 | KY000083_p123 | hypothetical protein | phrog_196 | baseplate hub | tail | 1 | 85071 | 85988 |
| APD20869.1 | KY000083_p70 | hypothetical protein | phrog_6773 | unknown function | unknown function | -1 | 47295 | 47711 |
| APD20844.1 | KY000083_p45 | hypothetical protein | phrog_5041 | unknown function | unknown function | 1 | 31441 | 31680 |
| APD20803.1 | KY000083_p4 | hypothetical protein | phrog_5847 | holin | lysis | 1 | 2659 | 2898 |
| APD20856.1 | KY000083_p57 | hypothetical protein | phrog_6818 | unknown function | unknown function | 1 | 38699 | 38893 |
| APD20886.1 | KY000083_p87 | phosphohydrolase | phrog_547 | phosphoesterase | other | -1 | 57719 | 58273 |
| APD20908.1 | KY000083_p109 | hypothetical protein | phrog_4103 | unknown function | unknown function | 1 | 73688 | 74605 |
| APD20823.1 | KY000083_p24 | hypothetical protein | phrog_6983 | unknown function | unknown function | 1 | 18938 | 19159 |
| APD20914.1 | KY000083_p115 | hypothetical protein | phrog_205 | tail sheath | tail | 1 | 78051 | 79337 |
| APD20834.1 | KY000083_p35 | hypothetical protein | phrog_3506 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 25872 | 26216 |
| APD20801.1 | KY000083_p2 | tail fiber protein | phrog_2282 | tail fiber protein | tail | 1 | 565 | 2064 |
| APD20899.1 | KY000083_p100 | hypothetical protein | phrog_343 | unknown function | unknown function | -1 | 64462 | 64755 |
| APD20903.1 | KY000083_p104 | hypothetical protein | phrog_5019 | unknown function | unknown function | -1 | 65947 | 66429 |
| APD20912.1 | KY000083_p113 | hypothetical protein | phrog_222 | tail completion or Neck1 protein | connector | 1 | 76685 | 77098 |
| APD20885.1 | KY000083_p86 | hypothetical protein | phrog_5447 | unknown function | unknown function | -1 | 57470 | 57706 |
| APD20919.1 | KY000083_p120 | tail length tape-measure protein | phrog_991 | tail length tape measure protein | tail | 1 | 81588 | 83954 |
| APD20865.1 | KY000083_p66 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43427 | 43567 |
| APD20814.1 | KY000083_p15 | hypothetical protein | phrog_4991 | unknown function | unknown function | 1 | 9811 | 10113 |
| APD20924.1 | KY000083_p125 | hypothetical protein | phrog_6 | baseplate wedge subunit | tail | 1 | 87110 | 88573 |
| APD20926.1 | KY000083_p127 | hypothetical protein | singleton | unknown function | unknown function | -1 | 90264 | 90806 |
| APD20836.1 | KY000083_p37 | ribonucleotide reductase of class Ia (aerobic) alpha subunit | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | 1 | 27285 | 29030 |
| APD20846.1 | KY000083_p47 | hypothetical protein | phrog_6266 | unknown function | unknown function | 1 | 32110 | 33096 |
| APD20838.1 | KY000083_p39 | hypothetical protein | phrog_6898 | unknown function | unknown function | 1 | 29475 | 29708 |
| APD20806.1 | KY000083_p7 | hypothetical protein | phrog_6945 | unknown function | unknown function | -1 | 4805 | 5617 |
| APD20873.1 | KY000083_p74 | hypothetical protein | phrog_6967 | unknown function | unknown function | -1 | 49630 | 49971 |
| APD20853.1 | KY000083_p54 | hypothetical protein | phrog_4323 | unknown function | unknown function | 1 | 36209 | 36355 |
| APD20920.1 | KY000083_p121 | hypothetical protein | phrog_817 | tail fiber protein | tail | 1 | 83951 | 84712 |
| APD20887.1 | KY000083_p88 | hypothetical protein | phrog_6781 | unknown function | unknown function | -1 | 58273 | 58704 |
| APD20900.1 | KY000083_p101 | hypothetical protein | phrog_6961 | unknown function | unknown function | -1 | 64752 | 64937 |
| APD20911.1 | KY000083_p112 | hypothetical protein | phrog_1732 | unknown function | unknown function | 1 | 76171 | 76647 |
| APD20893.1 | KY000083_p94 | hypothetical protein | phrog_5276 | unknown function | unknown function | -1 | 62421 | 62690 |
| APD20917.1 | KY000083_p118 | hypothetical protein | phrog_1613 | tail assembly chaperone | tail | 1 | 80960 | 81331 |
| APD20810.1 | KY000083_p11 | hypothetical protein | singleton | unknown function | unknown function | -1 | 7650 | 8222 |
| APD20905.1 | KY000083_p106 | terminase large subunit | phrog_979 | terminase large subunit | head and packaging | 1 | 70239 | 71759 |
| APD20800.1 | KY000083_p1 | hypothetical protein | phrog_4628 | tail fiber assembly | tail | 1 | 174 | 551 |
| APD20835.1 | KY000083_p36 | ribonucleotide reductase of class Ia (aerobic) beta subunit | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | 1 | 26246 | 27292 |
| APD20884.1 | KY000083_p85 | hypothetical protein | phrog_2339 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 57193 | 57468 |
| APD20827.1 | KY000083_p28 | hypothetical protein | phrog_221 | metallo-phosphoesterase | other | 1 | 22023 | 22802 |
| APD20822.1 | KY000083_p23 | hypothetical protein | phrog_2544 | unknown function | unknown function | 1 | 17591 | 18595 |
| APD20840.1 | KY000083_p41 | hypothetical protein | phrog_7233 | unknown function | unknown function | 1 | 30247 | 30432 |
| APD20866.1 | KY000083_p67 | hypothetical protein | phrog_5746 | unknown function | unknown function | 1 | 43585 | 43875 |
| APD20891.1 | KY000083_p92 | hypothetical protein | phrog_7094 | unknown function | unknown function | -1 | 61975 | 62202 |
| APD20870.1 | KY000083_p71 | hypothetical protein | phrog_7453 | unknown function | unknown function | -1 | 47734 | 48420 |
| APD20824.1 | KY000083_p25 | exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 19203 | 20255 |
| APD20832.1 | KY000083_p33 | 3'-phosphatase, 5'-polynucleotide kinase | phrog_7063 | 3'-phosphatase, 5'-polynucleotide kinase | other | 1 | 23765 | 24715 |
| APD20819.1 | KY000083_p20 | hypothetical protein | phrog_3878 | unknown function | unknown function | 1 | 16177 | 16575 |
| APD20883.1 | KY000083_p84 | RNA ligase | phrog_562 | RNA ligase and tail fiber protein attachment catalyst | tail | -1 | 55860 | 56777 |
| APD20864.1 | KY000083_p65 | hypothetical protein | phrog_6876 | unknown function | unknown function | 1 | 42889 | 43059 |
| APD20890.1 | KY000083_p91 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 60351 | 61559 |
| APD20915.1 | KY000083_p116 | hypothetical protein | phrog_280 | virion structural protein | head and packaging | 1 | 79368 | 79892 |
| APD20815.1 | KY000083_p16 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10423 | 10536 |
| APD20841.1 | KY000083_p42 | hypothetical protein | phrog_6863 | unknown function | unknown function | 1 | 30473 | 30712 |
| APD20871.1 | KY000083_p72 | hypothetical protein | singleton | unknown function | unknown function | -1 | 49000 | 49125 |
| APD20858.1 | KY000083_p59 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39569 | 39727 |
| APD20897.1 | KY000083_p98 | hypothetical protein | phrog_7048 | unknown function | unknown function | -1 | 63963 | 64241 |
| APD20805.1 | KY000083_p6 | hypothetical protein | phrog_2827 | unknown function | unknown function | -1 | 4163 | 4471 |
| APD20882.1 | KY000083_p83 | hypothetical protein | singleton | unknown function | unknown function | 1 | 55490 | 55624 |
| APD20847.1 | KY000083_p48 | hypothetical protein | phrog_5201 | unknown function | unknown function | 1 | 34672 | 34938 |
| APD20825.1 | KY000083_p26 | hypothetical protein | phrog_1985 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 20252 | 20815 |
| APD20820.1 | KY000083_p21 | hypothetical protein | phrog_7532 | unknown function | unknown function | 1 | 16604 | 16771 |
| APD20809.1 | KY000083_p10 | hypothetical protein | phrog_4794 | unknown function | unknown function | -1 | 6952 | 7191 |
| APD20829.1 | KY000083_p30 | hypothetical protein | phrog_6873 | unknown function | unknown function | 1 | 22993 | 23202 |
| APD20923.1 | KY000083_p124 | hypothetical protein | phrog_11 | baseplate spike | tail | 1 | 85985 | 86725 |
| APD20855.1 | KY000083_p56 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38293 | 38433 |
| APD20842.1 | KY000083_p43 | hypothetical protein | phrog_6974 | unknown function | unknown function | 1 | 30732 | 31235 |
| APD20851.1 | KY000083_p52 | hypothetical protein | phrog_6265 | unknown function | unknown function | 1 | 35699 | 35827 |
| APD20879.1 | KY000083_p80 | nicotinamide phosphoribosyltransferase | phrog_448 | nicotinamide phosphoribosyl transferase | other | -1 | 52597 | 54285 |
| APD20821.1 | KY000083_p22 | hypothetical protein | phrog_6824 | unknown function | unknown function | 1 | 16773 | 17489 |
| APD20875.1 | KY000083_p76 | hypothetical protein | phrog_768 | DprA-like DNA recombination-mediator protein | DNA, RNA and nucleotide metabolism | -1 | 50860 | 51567 |
| APD20878.1 | KY000083_p79 | hypothetical protein | phrog_6997 | unknown function | unknown function | -1 | 52388 | 52585 |
| APD20902.1 | KY000083_p103 | hypothetical protein | phrog_5067 | unknown function | unknown function | -1 | 65594 | 65950 |
| APD20916.1 | KY000083_p117 | hypothetical protein | singleton | unknown function | unknown function | 1 | 80764 | 80946 |
| APD20868.1 | KY000083_p69 | hypothetical protein | phrog_953 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 45306 | 45899 |
| APD20861.1 | KY000083_p62 | hypothetical protein | singleton | unknown function | unknown function | -1 | 41900 | 42088 |
| APD20921.1 | KY000083_p122 | hypothetical protein | singleton | unknown function | unknown function | 1 | 84844 | 85074 |
| APD20913.1 | KY000083_p114 | hypothetical protein | phrog_4087 | unknown function | unknown function | 1 | 77475 | 78038 |
| APD20848.1 | KY000083_p49 | hypothetical protein | phrog_6353 | unknown function | unknown function | 1 | 34953 | 35096 |
| APD20880.1 | KY000083_p81 | hypothetical protein | phrog_7663 | unknown function | unknown function | -1 | 54342 | 54497 |
| APD20859.1 | KY000083_p60 | hypothetical protein | phrog_6935 | unknown function | unknown function | 1 | 39724 | 40116 |
| APD20839.1 | KY000083_p40 | hypothetical protein | phrog_7088 | unknown function | unknown function | 1 | 29708 | 29944 |
| APD20898.1 | KY000083_p99 | hypothetical protein | phrog_7505 | unknown function | unknown function | -1 | 64276 | 64461 |
| APD20872.1 | KY000083_p73 | hypothetical protein | phrog_7178 | unknown function | unknown function | -1 | 49418 | 49633 |
| APD20808.1 | KY000083_p9 | hypothetical protein | phrog_968 | RNA ligase | DNA, RNA and nucleotide metabolism | -1 | 5768 | 6904 |
| APD20892.1 | KY000083_p93 | hypothetical protein | phrog_2251 | unknown function | unknown function | -1 | 62212 | 62424 |
| APD20906.1 | KY000083_p107 | hypothetical protein | phrog_113 | portal protein | head and packaging | 1 | 71772 | 73211 |
| APD20901.1 | KY000083_p102 | hypothetical protein | singleton | unknown function | unknown function | -1 | 64998 | 65126 |
| APD20816.1 | KY000083_p17 | hypothetical protein | phrog_7814 | unknown function | unknown function | 1 | 10768 | 10959 |
| APD20862.1 | KY000083_p63 | hypothetical protein | phrog_5680 | unknown function | unknown function | 1 | 42053 | 42580 |