Genomic map of Staphylococcus phage SCH1 (KY000084)

functional categories (each PHROG annotation is associated to a category)             Notes   
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG

More about this genome

Staphylococcus phage SCH1, complete genome.
Molecule type
Genome structure
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Rosenblumvirus; Staphylococcus virus SCH1.
DB of origin
Host Name
Staphylococcus aureus
Host domain
Is prophage?
Number of proteins
Number of singletons
Number of paralogs

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APD20930.1 KY000084_p4 single stranded DNA-binding protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 911 1279
APD20932.1 KY000084_p6 hypothetical protein phrog_7529 unknown function unknown function 1 1512 1925
APD20933.1 KY000084_p7 hypothetical protein phrog_6099 unknown function unknown function 1 2091 2573
APD20935.1 KY000084_p9 DNA polymerase phrog_1907 DNA polymerase DNA, RNA and nucleotide metabolism 1 3884 6169
APD20942.1 KY000084_p16 hypothetical protein phrog_287 minor tail protein tail -1 12213 14156
APD20938.1 KY000084_p12 hypothetical protein phrog_29905 unknown function unknown function 1 7896 8078
APD20941.1 KY000084_p15 N-acetylmuramoyl-L-alanine amidase phrog_635 endolysin lysis -1 11449 12201
APD20940.1 KY000084_p14 tail fibers protein phrog_9604 tail protein tail -1 9941 11386
APD20939.1 KY000084_p13 tail fibers protein phrog_2248 tail protein tail -1 8121 9884
APD20936.1 KY000084_p10 hypothetical protein phrog_5979 unknown function unknown function -1 6283 7722
APD20943.1 KY000084_p17 hypothetical protein phrog_3225 adaptor Ad4 connector -1 14169 14924
APD20946.1 KY000084_p20 hypothetical protein phrog_6289 unknown function unknown function -1 17133 17315
APD20929.1 KY000084_p3 hypothetical protein phrog_6346 unknown function unknown function 1 651 887
APD20934.1 KY000084_p8 DNA packaging protein phrog_2150 terminase head and packaging 1 2621 3868
APD20937.1 KY000084_p11 hypothetical protein phrog_16802 unknown function unknown function -1 7697 7861
APD20927.1 KY000084_p1 hypothetical protein phrog_10178 unknown function unknown function 1 141 338
APD20928.1 KY000084_p2 hypothetical protein phrog_6274 unknown function unknown function 1 331 633
APD20945.1 KY000084_p19 capsid and scaffold protein phrog_2006 major head protein head and packaging -1 15915 17126
APD20944.1 KY000084_p18 collar protein phrog_2038 upper collar connector connector -1 14917 15900
APD20947.1 KY000084_p21 hypothetical protein phrog_7102 unknown function unknown function -1 17329 17736
APD20931.1 KY000084_p5 hypothetical protein phrog_7019 unknown function unknown function 1 1330 1509