Genomic map of Staphylococcus phage SCH111 (KY000085)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY000085
Definition
Staphylococcus phage SCH111, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Rosenblumvirus; unclassified Rosenblumvirus.
DB of origin
NUCCORE
Length
18018
Host Name
Staphylococcus aureus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
22
%GC
29.34
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APD20955.1 KY000085_p8 hypothetical protein singleton unknown function unknown function 1 2442 2570
APD20951.1 KY000085_p4 single stranded DNA-binding protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 911 1279
APD20965.1 KY000085_p18 lower collar protein phrog_3225 adaptor Ad4 connector -1 14166 14921
APD20962.1 KY000085_p15 tail fibers protein phrog_9604 tail protein tail -1 9938 11383
APD20956.1 KY000085_p9 DNA packaging protein phrog_2150 terminase head and packaging 1 2618 3865
APD20969.1 KY000085_p22 hypothetical protein phrog_7102 unknown function unknown function -1 17326 17733
APD20949.1 KY000085_p2 hypothetical protein phrog_6274 unknown function unknown function 1 331 633
APD20968.1 KY000085_p21 hypothetical protein phrog_6289 unknown function unknown function -1 17130 17312
APD20967.1 KY000085_p20 capsid and scaffold protein phrog_2006 major head protein head and packaging -1 15912 17123
APD20950.1 KY000085_p3 hypothetical protein phrog_6346 unknown function unknown function 1 651 887
APD20964.1 KY000085_p17 major teichoic acid biosynthesis protein C phrog_287 minor tail protein tail -1 12210 14153
APD20966.1 KY000085_p19 collar protein phrog_2038 upper collar connector connector -1 14914 15897
APD20961.1 KY000085_p14 tail fibers protein phrog_2248 tail protein tail -1 8118 9881
APD20959.1 KY000085_p12 hypothetical protein phrog_16802 unknown function unknown function -1 7694 7858
APD20960.1 KY000085_p13 hypothetical protein phrog_29905 unknown function unknown function 1 7893 8075
APD20952.1 KY000085_p5 hypothetical protein phrog_7019 unknown function unknown function 1 1330 1509
APD20963.1 KY000085_p16 N-acetylmuramoyl-L-alanine amidase phrog_635 endolysin lysis -1 11446 12198
APD20957.1 KY000085_p10 DNA polymerase phrog_1907 DNA polymerase DNA, RNA and nucleotide metabolism 1 3881 6166
APD20948.1 KY000085_p1 hypothetical protein phrog_10178 unknown function unknown function 1 141 338
APD20954.1 KY000085_p7 hypothetical protein phrog_6099 unknown function unknown function 1 2089 2457
APD20953.1 KY000085_p6 hypothetical protein phrog_7529 unknown function unknown function 1 1580 1909
APD20958.1 KY000085_p11 hypothetical protein phrog_5979 unknown function unknown function -1 6280 7719