Genomic map of Bordetella phage CN2 (KY000219)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY000219
Definition
Bordetella phage CN2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Vojvodinavirus; Bordetella virus CN2.
DB of origin
NUCCORE
Length
62030
Host Name
Bordetella bronchiseptica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
81
%GC
64.03
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APL99279.1 KY000219_p61 hypothetical protein phrog_14870 unknown function unknown function 1 44560 45321
APL99268.1 KY000219_p50 hypothetical protein phrog_18256 unknown function unknown function 1 35039 35245
APL99258.1 KY000219_p40 hypothetical protein phrog_35808 unknown function unknown function 1 30868 31068
APL99226.1 KY000219_p8 hypothetical protein phrog_7790 unknown function unknown function 1 8744 9601
APL99282.1 KY000219_p64 Rz protein phrog_1327 Rz-like spanin lysis 1 46145 46711
APL99277.1 KY000219_p59 structural protein phrog_206 head scaffolding protein head and packaging 1 42584 43348
APL99230.1 KY000219_p12 DNA repair photolyase phrog_9252 DNA repair photolyase DNA, RNA and nucleotide metabolism 1 11667 13121
APL99273.1 KY000219_p55 terminase large subunit phrog_2 terminase large subunit head and packaging 1 37413 38981
APL99242.1 KY000219_p24 integrase phrog_1829 DNA primase DNA, RNA and nucleotide metabolism 1 21175 23601
APL99228.1 KY000219_p10 hypothetical protein phrog_7696 unknown function unknown function 1 10524 10754
APL99283.1 KY000219_p65 holin phrog_8226 holin lysis 1 46708 47055
APL99276.1 KY000219_p58 minor structural protein phrog_241 head morphogenesis head and packaging 1 40691 42520
APL99284.1 KY000219_p66 endolysin phrog_669 endolysin lysis 1 47040 47780
APL99233.1 KY000219_p15 hypothetical protein phrog_1965 unknown function unknown function 1 14750 15313
APL99278.1 KY000219_p60 major structural protein phrog_212 major head protein head and packaging 1 43539 44471
APL99260.1 KY000219_p42 hypothetical protein phrog_10079 unknown function unknown function 1 31735 32886
APL99252.1 KY000219_p34 hypothetical protein phrog_9190 unknown function unknown function 1 27522 27830
APL99270.1 KY000219_p52 hypothetical protein phrog_8564 unknown function unknown function 1 35448 35657
APL99221.1 KY000219_p3 hypothetical protein phrog_2378 unknown function unknown function 1 2894 3448
APL99240.1 KY000219_p22 hypothetical protein phrog_2165 DNA helicase DNA, RNA and nucleotide metabolism 1 20464 20862
APL99266.1 KY000219_p48 hypothetical protein phrog_6858 unknown function unknown function 1 34357 34623
APL99293.1 KY000219_p75 structural protein phrog_1082 tail assembly protein tail 1 54735 55922
APL99257.1 KY000219_p39 diguanylate-cyclase GGDEF domain protein phrog_5594 unknown function unknown function 1 30325 30783
APL99254.1 KY000219_p36 hypothetical protein phrog_20881 unknown function unknown function 1 28022 28603
APL99259.1 KY000219_p41 transcription elongation protein SprT phrog_6361 unknown function unknown function 1 31068 31664
APL99296.1 KY000219_p78 tail assembly protein phrog_1196 tail assembly chaperone tail 1 57565 57771
APL99244.1 KY000219_p26 hypothetical protein phrog_17845 unknown function unknown function 1 23868 24098
APL99251.1 KY000219_p33 hypothetical protein phrog_9341 unknown function unknown function 1 27229 27519
APL99249.1 KY000219_p31 pyrophosphatase phrog_9147 unknown function unknown function 1 26134 26745
APL99222.1 KY000219_p4 hypothetical protein phrog_2402 unknown function unknown function 1 3654 4484
APL99255.1 KY000219_p37 exonuclease phrog_255 exonuclease DNA, RNA and nucleotide metabolism 1 28884 29429
APL99229.1 KY000219_p11 threonine dehydratase phrog_7093 threonine dehydratase other 1 10751 11596
APL99291.1 KY000219_p73 virion structural protein phrog_169 tail completion or Neck1 protein connector 1 51480 51926
APL99267.1 KY000219_p49 hypothetical protein phrog_6596 unknown function unknown function 1 34620 35042
APL99287.1 KY000219_p69 structural protein phrog_179 tail terminator connector 1 48656 49111
APL99298.1 KY000219_p80 tail protein phrog_10304 virion structural protein head and packaging 1 60651 61259
APL99295.1 KY000219_p77 virion structural protein phrog_1180 tail assembly chaperone tail 1 57335 57568
APL99238.1 KY000219_p20 hypothetical protein phrog_8389 unknown function unknown function 1 19495 19812
APL99271.1 KY000219_p53 phosphoribosyl-ATP pyrophosphohydrolase phrog_671 nucleotide pyrophosphohydrolase other 1 35654 36268
APL99289.1 KY000219_p71 structural protein phrog_313 Tail assembly chaperone tail 1 50748 51206
APL99219.1 KY000219_p1 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 723 2468
APL99250.1 KY000219_p32 hypothetical protein phrog_7569 unknown function unknown function 1 26742 27218
APL99288.1 KY000219_p70 major structural protein phrog_290 minor tail protein tail 1 49152 50687
APL99223.1 KY000219_p5 ATP-binding protein phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism 1 4557 5756
APL99281.1 KY000219_p63 hypothetical protein phrog_8884 unknown function unknown function 1 45973 46143
APL99275.1 KY000219_p57 hypothetical protein phrog_9943 unknown function unknown function 1 40545 40664
APL99264.1 KY000219_p46 hypothetical protein phrog_11606 unknown function unknown function 1 33654 33839
APL99269.1 KY000219_p51 hypothetical protein phrog_30424 unknown function unknown function 1 35245 35448
APL99236.1 KY000219_p18 hypothetical protein phrog_5839 unknown function unknown function 1 17127 17516
APL99237.1 KY000219_p19 DNA polymerase A phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 17516 19498
APL99256.1 KY000219_p38 DNA binding domain protein phrog_3628 unknown function unknown function 1 29495 30316
APL99262.1 KY000219_p44 hypothetical protein phrog_19733 unknown function unknown function 1 33132 33431
APL99261.1 KY000219_p43 hypothetical protein phrog_18490 unknown function unknown function 1 32899 33135
APL99232.1 KY000219_p14 hypothetical protein phrog_2396 unknown function unknown function 1 13713 14723
APL99234.1 KY000219_p16 thymidylate synthase/deoxyuridylate hydroxymethyltransferase phrog_5131 thymidylate synthase DNA, RNA and nucleotide metabolism 1 15327 16391
APL99224.1 KY000219_p6 ribonucleotide-diphosphate reductase subunit alpha phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 5909 7603
APL99239.1 KY000219_p21 deoxycytidylate deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 19809 20471
APL99245.1 KY000219_p27 hypothetical protein phrog_8293 unknown function unknown function 1 24103 24300
APL99243.1 KY000219_p25 hypothetical protein phrog_2053 unknown function unknown function 1 23613 23825
APL99231.1 KY000219_p13 nucleoside triphosphate hydrolase phrog_800 terminase small subunit head and packaging 1 13147 13713
APL99299.1 KY000219_p81 F5/8 type C domain protein phrog_10304 virion structural protein head and packaging 1 61310 61945
APL99220.1 KY000219_p2 hypothetical protein phrog_5888 unknown function unknown function 1 2465 2827
APL99265.1 KY000219_p47 hypothetical protein singleton unknown function unknown function 1 33843 34364
APL99263.1 KY000219_p45 hypothetical protein phrog_23430 unknown function unknown function 1 33428 33667
APL99297.1 KY000219_p79 virion structural protein phrog_1101 tail protein tail 1 57812 60565
APL99280.1 KY000219_p62 hypothetical protein phrog_6213 unknown function unknown function 1 45344 45937
APL99290.1 KY000219_p72 tail chaperonin phrog_3817 tail chaperonin tail 1 51230 51496
APL99225.1 KY000219_p7 ribonucleotide-diphosphate reductase subunit beta phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 7606 8571
APL99247.1 KY000219_p29 hypothetical protein phrog_9297 unknown function unknown function 1 25509 25862
APL99248.1 KY000219_p30 hypothetical protein phrog_8938 unknown function unknown function 1 25877 26137
APL99253.1 KY000219_p35 hypothetical protein phrog_19857 unknown function unknown function 1 27889 28005
APL99286.1 KY000219_p68 structural protein phrog_161 head closure Hc1 connector 1 48291 48659
APL99272.1 KY000219_p54 terminase small subunit phrog_4044 terminase small subunit head and packaging 1 36901 37413
APL99292.1 KY000219_p74 tail length tape measure protein phrog_3336 tail length tape measure protein tail 1 51929 54748
APL99241.1 KY000219_p23 repressor phrog_3 transcriptional repressor transcription regulation 1 20859 21173
APL99246.1 KY000219_p28 hypothetical protein phrog_8203 unknown function unknown function 1 24328 25512
APL99227.1 KY000219_p9 hypothetical protein phrog_6364 unknown function unknown function 1 9667 10527
APL99235.1 KY000219_p17 5'-deoxynucleotidase phrog_6047 unknown function unknown function 1 16384 16956
APL99294.1 KY000219_p76 virion structural protein phrog_15205 tail assembly protein tail 1 55919 57322
APL99274.1 KY000219_p56 structural protein phrog_145 portal protein head and packaging 1 39040 40548
APL99285.1 KY000219_p67 structural protein phrog_477 head-tail adaptor Ad1 connector 1 47771 48289