Genomic map of Bordetella phage FP1 (KY000220)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY000220
Definition
Bordetella phage FP1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Vojvodinavirus; Bordetella virus FP1.
DB of origin
NUCCORE
Length
60332
Host Name
Bordetella bronchiseptica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
80
%GC
64.18
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APL99340.1 KY000220_p41 transcription elongation protein SprT phrog_6361 unknown function unknown function 1 30423 31034
APL99334.1 KY000220_p35 hypothetical protein phrog_19857 unknown function unknown function 1 27890 28006
APL99321.1 KY000220_p22 hypothetical protein phrog_2165 DNA helicase DNA, RNA and nucleotide metabolism 1 20465 20863
APL99359.1 KY000220_p60 hypothetical protein phrog_14870 unknown function unknown function 1 42788 43549
APL99374.1 KY000220_p75 virion structural protein phrog_15205 tail assembly protein tail 1 54144 55547
APL99331.1 KY000220_p32 hypothetical protein phrog_7569 unknown function unknown function 1 26745 27221
APL99333.1 KY000220_p34 hypothetical protein phrog_9190 unknown function unknown function 1 27525 27833
APL99329.1 KY000220_p30 hypothetical protein phrog_8938 unknown function unknown function 1 25880 26140
APL99335.1 KY000220_p36 hypothetical protein phrog_20881 unknown function unknown function 1 28022 28591
APL99347.1 KY000220_p48 hypothetical protein phrog_6596 unknown function unknown function 1 33486 33896
APL99304.1 KY000220_p5 ATP-binding protein phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism 1 4480 5679
APL99314.1 KY000220_p15 hypothetical protein phrog_1965 unknown function unknown function 1 14751 15314
APL99377.1 KY000220_p78 virion structural protein phrog_1101 tail protein tail 1 56037 58790
APL99341.1 KY000220_p42 hypothetical protein phrog_10079 unknown function unknown function 1 31105 32256
APL99350.1 KY000220_p51 hypothetical protein phrog_8564 unknown function unknown function 1 34302 34511
APL99307.1 KY000220_p8 hypothetical protein phrog_7790 unknown function unknown function 1 8715 9602
APL99343.1 KY000220_p44 hypothetical protein phrog_19733 unknown function unknown function 1 32502 32801
APL99322.1 KY000220_p23 repressor phrog_3 transcriptional repressor transcription regulation 1 20860 21174
APL99306.1 KY000220_p7 ribonucleotide-diphosphate reductase subunit beta phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 7529 8494
APL99361.1 KY000220_p62 hypothetical protein phrog_8884 unknown function unknown function 1 44201 44371
APL99339.1 KY000220_p40 hypothetical protein singleton unknown function unknown function 1 30246 30410
APL99308.1 KY000220_p9 hypothetical protein phrog_6364 unknown function unknown function 1 9668 10528
APL99371.1 KY000220_p72 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 49708 50154
APL99376.1 KY000220_p77 tail assembly protein phrog_1196 tail assembly chaperone tail 1 55790 55996
APL99327.1 KY000220_p28 hypothetical protein phrog_8203 unknown function unknown function 1 24335 25513
APL99310.1 KY000220_p11 threonine dehydratase phrog_7093 threonine dehydratase other 1 10752 11597
APL99301.1 KY000220_p2 hypothetical protein phrog_5888 unknown function unknown function 1 2388 2750
APL99319.1 KY000220_p20 DNA primase phrog_8389 unknown function unknown function 1 19496 19813
APL99325.1 KY000220_p26 hypothetical protein phrog_17845 unknown function unknown function 1 23881 24099
APL99338.1 KY000220_p39 diguanylate-cyclase GGDEF domain protein phrog_5594 unknown function unknown function 1 29692 30162
APL99316.1 KY000220_p17 5'-deoxynucleotidase phrog_6047 unknown function unknown function 1 16385 16966
APL99358.1 KY000220_p59 major capsid protein phrog_212 major head protein head and packaging 1 41767 42699
APL99302.1 KY000220_p3 hypothetical protein phrog_2378 unknown function unknown function 1 2844 3371
APL99356.1 KY000220_p57 minor structural protein phrog_241 head morphogenesis head and packaging 1 39540 40748
APL99363.1 KY000220_p64 holin phrog_8226 holin lysis 1 44936 45283
APL99344.1 KY000220_p45 hypothetical protein phrog_23430 unknown function unknown function 1 32798 33037
APL99367.1 KY000220_p68 structural protein phrog_179 tail terminator connector 1 46884 47339
APL99365.1 KY000220_p66 structural protein phrog_477 head-tail adaptor Ad1 connector 1 45999 46517
APL99355.1 KY000220_p56 hypothetical protein phrog_9943 unknown function unknown function 1 39443 39556
APL99336.1 KY000220_p37 exonuclease phrog_255 exonuclease DNA, RNA and nucleotide metabolism 1 28872 29417
APL99324.1 KY000220_p25 hypothetical protein phrog_2053 unknown function unknown function 1 23614 23826
APL99369.1 KY000220_p70 structural protein phrog_313 Tail assembly chaperone tail 1 48976 49434
APL99362.1 KY000220_p63 Rz protein phrog_1327 Rz-like spanin lysis 1 44373 44939
APL99312.1 KY000220_p13 nucleoside triphosphate hydrolase phrog_800 terminase small subunit head and packaging 1 13148 13714
APL99342.1 KY000220_p43 hypothetical protein phrog_18490 unknown function unknown function 1 32269 32505
APL99330.1 KY000220_p31 pyrophosphatase phrog_9147 unknown function unknown function 1 26137 26748
APL99309.1 KY000220_p10 hypothetical protein phrog_7696 unknown function unknown function 1 10525 10755
APL99357.1 KY000220_p58 virion structural protein phrog_206 head scaffolding protein head and packaging 1 40812 41576
APL99375.1 KY000220_p76 virion structural protein phrog_1180 tail assembly chaperone tail 1 55560 55793
APL99372.1 KY000220_p73 tail length tape measure protein phrog_3336 tail length tape measure protein tail 1 50157 52973
APL99345.1 KY000220_p46 hypothetical protein phrog_11606 unknown function unknown function 1 33024 33215
APL99351.1 KY000220_p52 nucleotide pyrophosphohydrolase phrog_671 nucleotide pyrophosphohydrolase other 1 34508 35143
APL99354.1 KY000220_p55 structural protein phrog_145 portal protein head and packaging 1 37938 39446
APL99311.1 KY000220_p12 DNA repair photolyase phrog_9252 DNA repair photolyase DNA, RNA and nucleotide metabolism 1 11668 13122
APL99373.1 KY000220_p74 tail assembly structural protein phrog_1082 tail assembly protein tail 1 52960 54147
APL99317.1 KY000220_p18 hypothetical protein phrog_5839 unknown function unknown function 1 17128 17517
APL99300.1 KY000220_p1 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 646 2391
APL99326.1 KY000220_p27 hypothetical protein phrog_8293 unknown function unknown function 1 24104 24301
APL99360.1 KY000220_p61 hypothetical protein phrog_6213 unknown function unknown function 1 43572 44165
APL99337.1 KY000220_p38 hypothetical protein singleton unknown function unknown function 1 29477 29692
APL99315.1 KY000220_p16 thymidylate synthase/deoxyuridylate hydroxymethyltransferase phrog_5131 thymidylate synthase DNA, RNA and nucleotide metabolism 1 15328 16392
APL99320.1 KY000220_p21 deoxycytidylate deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 19810 20472
APL99328.1 KY000220_p29 hypothetical protein phrog_9297 unknown function unknown function 1 25510 25866
APL99318.1 KY000220_p19 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 17517 19499
APL99323.1 KY000220_p24 integrase phrog_1829 DNA primase DNA, RNA and nucleotide metabolism 1 21176 23602
APL99370.1 KY000220_p71 hypothetical protein phrog_3817 tail chaperonin tail 1 49458 49724
APL99368.1 KY000220_p69 major tail tube protein phrog_290 minor tail protein tail 1 47380 48915
APL99352.1 KY000220_p53 terminase small subunit phrog_4044 terminase small subunit head and packaging 1 35799 36311
APL99313.1 KY000220_p14 hypothetical protein phrog_2396 unknown function unknown function 1 13714 14724
APL99353.1 KY000220_p54 terminase large subunit phrog_2 terminase large subunit head and packaging 1 36311 37879
APL99349.1 KY000220_p50 hypothetical protein phrog_30424 unknown function unknown function 1 34096 34302
APL99378.1 KY000220_p79 tail protein phrog_10304 virion structural protein head and packaging 1 58876 59484
APL99346.1 KY000220_p47 hypothetical protein phrog_6858 unknown function unknown function 1 33217 33477
APL99364.1 KY000220_p65 endolysin phrog_669 endolysin lysis 1 45268 46008
APL99305.1 KY000220_p6 ribonucleotide-diphosphate reductase subunit alpha phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 5832 7526
APL99379.1 KY000220_p80 F5/8 type C domain protein phrog_10304 virion structural protein head and packaging 1 59535 60170
APL99332.1 KY000220_p33 hypothetical protein phrog_9341 unknown function unknown function 1 27232 27522
APL99303.1 KY000220_p4 hypothetical protein phrog_2402 unknown function unknown function 1 3577 4407
APL99348.1 KY000220_p49 hypothetical protein phrog_18256 unknown function unknown function 1 33893 34099
APL99366.1 KY000220_p67 structural protein phrog_161 head closure Hc1 connector 1 46519 46887