Genomic map of Bordetella phage CN1 (KY000221)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY000221
Definition
Bordetella phage CN1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Vojvodinavirus; Bordetella virus CN1.
DB of origin
NUCCORE
Length
59779
Host Name
Bordetella bronchiseptica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
79
%GC
63.97
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APL99423.1 KY000221_p44 hypothetical protein phrog_10132 anti-restriction protein moron, auxiliary metabolic gene and host takeover 1 32010 32423
APL99444.1 KY000221_p65 structural protein phrog_477 head-tail adaptor Ad1 connector 1 45505 46023
APL99450.1 KY000221_p71 virion structural protein phrog_169 tail completion or Neck1 protein connector 1 49214 49660
APL99412.1 KY000221_p33 hypothetical protein phrog_9341 unknown function unknown function 1 27338 27628
APL99431.1 KY000221_p52 terminase small subunit phrog_4044 terminase small subunit head and packaging 1 35305 35817
APL99389.1 KY000221_p10 hypothetical protein phrog_7696 unknown function unknown function 1 10618 10848
APL99453.1 KY000221_p74 FAD/FMN-containing dehydrogenase phrog_15205 tail assembly protein tail 1 53653 55056
APL99437.1 KY000221_p58 major structural protein phrog_212 major head protein head and packaging 1 41273 42205
APL99457.1 KY000221_p78 hypothetical protein phrog_10304 virion structural protein head and packaging 1 58385 58993
APL99436.1 KY000221_p57 structural protein phrog_206 head scaffolding protein head and packaging 1 40318 41082
APL99381.1 KY000221_p2 hypothetical protein phrog_5888 unknown function unknown function 1 2450 2812
APL99391.1 KY000221_p12 DNA repair photolyase phrog_9252 DNA repair photolyase DNA, RNA and nucleotide metabolism 1 11761 13215
APL99403.1 KY000221_p24 integrase phrog_1829 DNA primase DNA, RNA and nucleotide metabolism 1 21284 23710
APL99440.1 KY000221_p61 hypothetical protein phrog_8884 unknown function unknown function 1 43707 43877
APL99385.1 KY000221_p6 ribonucleotide-diphosphate reductase subunit alpha phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 5894 7588
APL99425.1 KY000221_p46 hypothetical protein phrog_8760 unknown function unknown function 1 32833 33045
APL99386.1 KY000221_p7 ribonucleotide-diphosphate reductase subunit beta phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 7585 8556
APL99394.1 KY000221_p15 hypothetical protein phrog_1965 unknown function unknown function 1 14859 15422
APL99416.1 KY000221_p37 exonuclease singleton unknown function unknown function 1 28867 28950
APL99407.1 KY000221_p28 hypothetical protein phrog_8203 unknown function unknown function 1 24437 25621
APL99405.1 KY000221_p26 hypothetical protein phrog_17845 unknown function unknown function 1 23989 24207
APL99401.1 KY000221_p22 hypothetical protein phrog_2165 DNA helicase DNA, RNA and nucleotide metabolism 1 20588 20971
APL99388.1 KY000221_p9 hypothetical protein phrog_6364 unknown function unknown function 1 9761 10621
APL99454.1 KY000221_p75 virion structural protein phrog_1180 tail assembly chaperone tail 1 55069 55302
APL99429.1 KY000221_p50 hypothetical protein phrog_8564 unknown function unknown function 1 33924 34133
APL99446.1 KY000221_p67 structural protein phrog_179 tail terminator connector 1 46390 46845
APL99390.1 KY000221_p11 threonine dehydratase phrog_7093 threonine dehydratase other 1 10845 11690
APL99392.1 KY000221_p13 nucleoside triphosphate hydrolase phrog_800 terminase small subunit head and packaging 1 13241 13807
APL99427.1 KY000221_p48 hypothetical protein phrog_6596 unknown function unknown function 1 33311 33721
APL99395.1 KY000221_p16 thymidylate synthase/deoxyuridylate hydroxymethyltransferase phrog_5131 thymidylate synthase DNA, RNA and nucleotide metabolism 1 15436 16500
APL99393.1 KY000221_p14 hypothetical protein phrog_2396 unknown function unknown function 1 13807 14832
APL99382.1 KY000221_p3 hypothetical protein phrog_2378 unknown function unknown function 1 2906 3433
APL99417.1 KY000221_p38 RNA polymerase-binding protein phrog_54 DksA-like zinc-finger protein other 1 28943 29134
APL99421.1 KY000221_p42 diguanylate-cyclase GGDEF domain protein phrog_5594 unknown function unknown function 1 30832 31290
APL99419.1 KY000221_p40 hypothetical protein phrog_15793 unknown function unknown function 1 29684 29947
APL99387.1 KY000221_p8 hypothetical protein phrog_7790 unknown function unknown function 1 8775 9695
APL99432.1 KY000221_p53 terminase large subunit phrog_2 terminase large subunit head and packaging 1 35817 37385
APL99398.1 KY000221_p19 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 17625 19607
APL99402.1 KY000221_p23 repressor phrog_3 transcriptional repressor transcription regulation 1 20968 21282
APL99413.1 KY000221_p34 hypothetical protein phrog_9190 unknown function unknown function 1 27631 27942
APL99428.1 KY000221_p49 hypothetical protein phrog_18256 unknown function unknown function 1 33718 33924
APL99383.1 KY000221_p4 hypothetical protein phrog_2402 unknown function unknown function 1 3639 4469
APL99408.1 KY000221_p29 hypothetical protein phrog_9297 unknown function unknown function 1 25618 25971
APL99399.1 KY000221_p20 hypothetical protein phrog_8389 unknown function unknown function 1 19604 19921
APL99449.1 KY000221_p70 hypothetical protein phrog_3817 tail chaperonin tail 1 48964 49230
APL99406.1 KY000221_p27 hypothetical protein phrog_8293 unknown function unknown function 1 24212 24409
APL99445.1 KY000221_p66 structural protein phrog_161 head closure Hc1 connector 1 46025 46393
APL99430.1 KY000221_p51 phosphoribosyl-ATP pyrophosphohydrolase phrog_671 nucleotide pyrophosphohydrolase other 1 34130 34663
APL99434.1 KY000221_p55 hypothetical protein phrog_9943 unknown function unknown function 1 38949 39062
APL99438.1 KY000221_p59 hypothetical protein phrog_14870 unknown function unknown function 1 42294 43055
APL99411.1 KY000221_p32 hypothetical protein phrog_7569 unknown function unknown function 1 26851 27327
APL99426.1 KY000221_p47 hypothetical protein phrog_6858 unknown function unknown function 1 33042 33302
APL99420.1 KY000221_p41 hypothetical protein phrog_3628 unknown function unknown function 1 30005 30823
APL99418.1 KY000221_p39 hypothetical protein phrog_8020 unknown function unknown function 1 29246 29581
APL99409.1 KY000221_p30 hypothetical protein phrog_8938 unknown function unknown function 1 25986 26246
APL99404.1 KY000221_p25 hypothetical protein phrog_2053 unknown function unknown function 1 23722 23934
APL99396.1 KY000221_p17 5'-deoxynucleotidase phrog_6047 unknown function unknown function 1 16493 17074
APL99433.1 KY000221_p54 structural protein phrog_145 portal protein head and packaging 1 37444 38952
APL99380.1 KY000221_p1 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 708 2453
APL99458.1 KY000221_p79 F5/8 type C domain protein phrog_10304 virion structural protein head and packaging 1 59002 59679
APL99415.1 KY000221_p36 hypothetical protein phrog_20881 unknown function unknown function 1 28071 28586
APL99397.1 KY000221_p18 hypothetical protein phrog_5839 unknown function unknown function 1 17236 17625
APL99435.1 KY000221_p56 minor structural protein phrog_241 head morphogenesis head and packaging 1 39046 40254
APL99451.1 KY000221_p72 tail length tape measure protein phrog_3336 tail length tape measure protein tail 1 49663 52482
APL99424.1 KY000221_p45 hypothetical protein phrog_10108 unknown function unknown function 1 32481 32810
APL99452.1 KY000221_p73 tail assembly structural protein phrog_1082 tail assembly protein tail 1 52469 53656
APL99441.1 KY000221_p62 Rz protein phrog_1327 Rz-like spanin lysis 1 43879 44445
APL99456.1 KY000221_p77 virion structural protein phrog_1101 tail protein tail 1 55546 58299
APL99422.1 KY000221_p43 antirestriction protein phrog_6361 unknown function unknown function 1 31375 31980
APL99442.1 KY000221_p63 holin phrog_8226 holin lysis 1 44442 44789
APL99384.1 KY000221_p5 ATP-binding protein phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism 1 4542 5741
APL99400.1 KY000221_p21 deoxycytidylate deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 19918 20580
APL99439.1 KY000221_p60 hypothetical protein phrog_6213 unknown function unknown function 1 43078 43671
APL99410.1 KY000221_p31 pyrophosphatase phrog_9147 unknown function unknown function 1 26243 26854
APL99455.1 KY000221_p76 tail assembly protein phrog_1196 tail assembly chaperone tail 1 55299 55505
APL99447.1 KY000221_p68 major structural protein phrog_290 minor tail protein tail 1 46886 48421
APL99448.1 KY000221_p69 structural protein phrog_313 Tail assembly chaperone tail 1 48482 48940
APL99414.1 KY000221_p35 hypothetical protein phrog_19857 unknown function unknown function 1 27939 28055
APL99443.1 KY000221_p64 endolysin phrog_669 endolysin lysis 1 44774 45514