Genomic map of Salmonella phage vB_SenS_Sergei (KY002061)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY002061
Definition
Salmonella phage vB_SenS_Sergei, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Sashavirus; unclassified Sashavirus.
DB of origin
NUCCORE
Length
56051
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
91
%GC
43.49
Number of singletons
3
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APU92926.1 KY002061_p89 hypothetical protein phrog_292 unknown function unknown function 1 54206 54415
APU92859.1 KY002061_p22 hypothetical protein phrog_7239 unknown function unknown function 1 9872 10126
APU92891.1 KY002061_p55 tail assembly chaperone phrog_313 Tail assembly chaperone tail 1 27015 27437
APU92843.1 KY002061_p6 hypothetical protein phrog_20565 unknown function unknown function -1 2107 2364
APU92854.1 KY002061_p17 hypothetical protein phrog_21347 unknown function unknown function -1 5554 6003
APU92865.1 KY002061_p28 portal protein phrog_113 portal protein head and packaging 1 12237 13592
APU92873.1 KY002061_p36 hypothetical protein phrog_26866 unknown function unknown function 1 16042 16224
APU92893.1 KY002061_p56 tail length tape measure protein phrog_1107 tail length tape measure protein tail 1 27805 30720
APU92911.1 KY002061_p74 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 43562 44707
APU92908.1 KY002061_p71 hypothetical protein phrog_19205 unknown function unknown function -1 40182 40718
APU92905.1 KY002061_p68 DNA methylase phrog_67 DNA methyltransferase other -1 38333 39514
APU92896.1 KY002061_p59 hypothetical protein phrog_329 minor tail protein tail 1 31789 32082
APU92887.1 KY002061_p50 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 23857 24288
APU92923.1 KY002061_p86 HNH endonuclease phrog_2118 HNH endonuclease DNA, RNA and nucleotide metabolism 1 52664 53092
APU92918.1 KY002061_p81 hypothetical protein phrog_9291 unknown function unknown function 1 50955 51167
APU92883.1 KY002061_p46 major capsid protein phrog_1005 major head protein head and packaging 1 21155 22174
APU92880.1 KY002061_p43 hypothetical protein phrog_1530 DNA methyltransferase other 1 19066 19476
APU92886.1 KY002061_p49 hypothetical protein phrog_161 head closure Hc1 connector 1 23481 23855
APU92917.1 KY002061_p80 DNA primase phrog_1829 DNA primase DNA, RNA and nucleotide metabolism 1 48510 50864
APU92875.1 KY002061_p38 hypothetical protein phrog_13897 unknown function unknown function 1 16402 16542
APU92860.1 KY002061_p23 hypothetical protein phrog_15669 unknown function unknown function -1 10334 10609
APU92872.1 KY002061_p35 hypothetical protein phrog_236 nucleotide kinase other 1 15840 16052
APU92906.1 KY002061_p69 nucleoside 2-deoxyribosyltransferase phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism -1 39504 39854
APU92850.1 KY002061_p13 hypothetical protein phrog_30984 unknown function unknown function -1 4484 4816
APU92858.1 KY002061_p21 hypothetical protein phrog_8329 unknown function unknown function 1 9367 9885
APU92877.1 KY002061_p40 hypothetical protein phrog_24659 unknown function unknown function -1 17693 17878
APU92912.1 KY002061_p75 hypothetical protein phrog_27827 unknown function unknown function -1 44707 45468
APU92899.1 KY002061_p62 holin or antiholin phrog_24402 holin lysis 1 36719 37045
APU92897.1 KY002061_p60 tail tip protein phrog_469 tail protein tail 1 32075 34603
APU92876.1 KY002061_p39 prohead assembly protein phrog_2468 head morphogenesis head and packaging 1 16593 17552
APU92855.1 KY002061_p18 large terminase subunit phrog_2 terminase large subunit head and packaging 1 6337 8100
APU92913.1 KY002061_p76 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 45639 47300
APU92922.1 KY002061_p85 hypothetical protein phrog_289 GTP-binding domain other 1 52272 52667
APU92904.1 KY002061_p67 hypothetical protein phrog_25980 unknown function unknown function -1 38116 38349
APU92870.1 KY002061_p33 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism -1 14900 15403
APU92861.1 KY002061_p24 hypothetical protein phrog_16556 unknown function unknown function -1 10615 10776
APU92857.1 KY002061_p20 hypothetical protein phrog_9157 unknown function unknown function 1 8982 9350
APU92871.1 KY002061_p34 hypothetical protein phrog_32742 unknown function unknown function 1 15517 15843
APU92841.1 KY002061_p4 hypothetical protein phrog_8009 unknown function unknown function -1 1477 1665
APU92902.1 KY002061_p65 i-spanin component phrog_1152 Rz-like spanin lysis 1 37653 38051
APU92910.1 KY002061_p73 hypothetical protein phrog_7011 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 42695 43546
APU92846.1 KY002061_p9 hypothetical protein singleton unknown function unknown function -1 3433 3612
APU92894.1 KY002061_p57 hypothetical protein phrog_384 virion structural protein head and packaging 1 30720 31223
APU92869.1 KY002061_p32 hypothetical protein phrog_5086 unknown function unknown function -1 14574 14900
APU92884.1 KY002061_p47 hypothetical protein phrog_19242 unknown function unknown function 1 22237 22590
APU92900.1 KY002061_p63 endolysin phrog_465 endolysin lysis 1 37042 37425
APU92878.1 KY002061_p41 hypothetical protein phrog_7033 unknown function unknown function -1 18097 18372
APU92867.1 KY002061_p30 hypothetical protein phrog_27401 unknown function unknown function -1 13976 14320
APU92845.1 KY002061_p8 hypothetical protein singleton unknown function unknown function -1 3278 3436
APU92847.1 KY002061_p10 hypothetical protein singleton unknown function unknown function -1 3609 3875
APU92903.1 KY002061_p66 o-spanin component phrog_2425 unknown function unknown function 1 37888 38136
APU92921.1 KY002061_p84 C-5 cytosine-specific DNA methylase phrog_757 DNA methyltransferase other 1 51571 52272
APU92928.1 KY002061_p91 hypothetical protein phrog_25538 unknown function unknown function -1 54835 55716
APU92874.1 KY002061_p37 NinH phrog_268 unknown function unknown function 1 16221 16409
APU92864.1 KY002061_p27 hypothetical protein phrog_2650 unknown function unknown function -1 11320 12018
APU92924.1 KY002061_p87 ParB-like protein phrog_1033 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 53152 53919
APU92840.1 KY002061_p3 hypothetical protein phrog_5305 unknown function unknown function -1 1271 1477
APU92839.1 KY002061_p2 hypothetical protein phrog_31759 unknown function unknown function -1 1032 1235
APU92879.1 KY002061_p42 hypothetical protein phrog_3527 unknown function unknown function -1 18377 18667
APU92927.1 KY002061_p90 hypothetical protein phrog_11861 unknown function unknown function 1 54466 54804
APU92851.1 KY002061_p14 hypothetical protein phrog_8294 unknown function unknown function -1 4774 4947
APU92853.1 KY002061_p16 hypothetical protein phrog_33811 unknown function unknown function -1 5138 5413
APU92882.1 KY002061_p45 major virion structural protein phrog_673 head scaffolding protein head and packaging 1 20741 21151
APU92849.1 KY002061_p12 hypothetical protein phrog_25300 unknown function unknown function -1 4189 4491
APU92863.1 KY002061_p26 hypothetical protein phrog_8758 unknown function unknown function -1 11117 11317
APU92907.1 KY002061_p70 NinX phrog_444 unknown function unknown function -1 39854 40189
APU92862.1 KY002061_p25 hypothetical protein phrog_1972 unknown function unknown function -1 10770 11099
APU92895.1 KY002061_p58 enolase-like protein phrog_396 minor tail protein tail 1 31220 31726
APU92915.1 KY002061_p78 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 47845 48336
APU92838.1 KY002061_p1 terminase small subunit phrog_51 terminase small subunit head and packaging 1 276 911
APU92888.1 KY002061_p51 hypothetical protein phrog_179 tail terminator connector 1 24288 24710
APU92842.1 KY002061_p5 hypothetical protein phrog_1229 unknown function unknown function -1 1775 2110
APU92868.1 KY002061_p31 hypothetical protein phrog_25244 unknown function unknown function -1 14326 14577
APU92898.1 KY002061_p61 tail fiber phrog_14879 tail fiber protein tail -1 34639 36690
APU92919.1 KY002061_p82 lipoprotein phrog_22517 lipoprotein other 1 51169 51366
APU92890.1 KY002061_p53 hypothetical protein phrog_30881 unknown function unknown function -1 26253 26876
APU92889.1 KY002061_p52 major tail tube protein phrog_290 minor tail protein tail 1 24747 26204
APU92848.1 KY002061_p11 hypothetical protein phrog_38795 unknown function unknown function -1 3911 4117
APU92901.1 KY002061_p64 holin or anti-holin phrog_1322 membrane protein moron, auxiliary metabolic gene and host takeover 1 37436 37666
APU92916.1 KY002061_p79 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 48333 48506
APU92844.1 KY002061_p7 recombination-associated protein or exonuclease phrog_724 exonuclease recombination-associated DNA, RNA and nucleotide metabolism -1 2361 3275
APU92881.1 KY002061_p44 hypothetical protein phrog_19463 unknown function unknown function 1 19476 20741
APU92856.1 KY002061_p19 hypothetical protein phrog_9288 unknown function unknown function 1 8226 8927
APU92852.1 KY002061_p15 hypothetical protein phrog_31372 unknown function unknown function -1 4951 5145
APU92909.1 KY002061_p72 DNA polymerase phrog_1252 DNA polymerase DNA, RNA and nucleotide metabolism -1 40758 42614
APU92892.1 KY002061_p54 tail assembly chaperone phrog_8233 tail assembly chaperone tail 1 27015 27733
APU92920.1 KY002061_p83 hypothetical protein phrog_26050 unknown function unknown function 1 51359 51574
APU92914.1 KY002061_p77 exonuclease phrog_255 exonuclease DNA, RNA and nucleotide metabolism 1 47342 47848
APU92885.1 KY002061_p48 hypothetical protein phrog_21889 unknown function unknown function 1 22963 23481
APU92866.1 KY002061_p29 hypothetical protein phrog_571 unknown function unknown function -1 13625 13960
APU92925.1 KY002061_p88 hypothetical protein phrog_1380 unknown function unknown function 1 53916 54107