| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY002061 |
Definition |
Salmonella phage vB_SenS_Sergei, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Sashavirus; unclassified Sashavirus. |
DB of origin |
NUCCORE |
Length |
56051 |
Host Name |
Salmonella enterica |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
91 |
%GC |
43.49 |
Number of singletons |
3 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APU92926.1 | KY002061_p89 | hypothetical protein | phrog_292 | unknown function | unknown function | 1 | 54206 | 54415 |
| APU92859.1 | KY002061_p22 | hypothetical protein | phrog_7239 | unknown function | unknown function | 1 | 9872 | 10126 |
| APU92891.1 | KY002061_p55 | tail assembly chaperone | phrog_313 | Tail assembly chaperone | tail | 1 | 27015 | 27437 |
| APU92843.1 | KY002061_p6 | hypothetical protein | phrog_20565 | unknown function | unknown function | -1 | 2107 | 2364 |
| APU92854.1 | KY002061_p17 | hypothetical protein | phrog_21347 | unknown function | unknown function | -1 | 5554 | 6003 |
| APU92865.1 | KY002061_p28 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 12237 | 13592 |
| APU92873.1 | KY002061_p36 | hypothetical protein | phrog_26866 | unknown function | unknown function | 1 | 16042 | 16224 |
| APU92893.1 | KY002061_p56 | tail length tape measure protein | phrog_1107 | tail length tape measure protein | tail | 1 | 27805 | 30720 |
| APU92911.1 | KY002061_p74 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 43562 | 44707 |
| APU92908.1 | KY002061_p71 | hypothetical protein | phrog_19205 | unknown function | unknown function | -1 | 40182 | 40718 |
| APU92905.1 | KY002061_p68 | DNA methylase | phrog_67 | DNA methyltransferase | other | -1 | 38333 | 39514 |
| APU92896.1 | KY002061_p59 | hypothetical protein | phrog_329 | minor tail protein | tail | 1 | 31789 | 32082 |
| APU92887.1 | KY002061_p50 | hypothetical protein | phrog_169 | tail completion or Neck1 protein | connector | 1 | 23857 | 24288 |
| APU92923.1 | KY002061_p86 | HNH endonuclease | phrog_2118 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 52664 | 53092 |
| APU92918.1 | KY002061_p81 | hypothetical protein | phrog_9291 | unknown function | unknown function | 1 | 50955 | 51167 |
| APU92883.1 | KY002061_p46 | major capsid protein | phrog_1005 | major head protein | head and packaging | 1 | 21155 | 22174 |
| APU92880.1 | KY002061_p43 | hypothetical protein | phrog_1530 | DNA methyltransferase | other | 1 | 19066 | 19476 |
| APU92886.1 | KY002061_p49 | hypothetical protein | phrog_161 | head closure Hc1 | connector | 1 | 23481 | 23855 |
| APU92917.1 | KY002061_p80 | DNA primase | phrog_1829 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 48510 | 50864 |
| APU92875.1 | KY002061_p38 | hypothetical protein | phrog_13897 | unknown function | unknown function | 1 | 16402 | 16542 |
| APU92860.1 | KY002061_p23 | hypothetical protein | phrog_15669 | unknown function | unknown function | -1 | 10334 | 10609 |
| APU92872.1 | KY002061_p35 | hypothetical protein | phrog_236 | nucleotide kinase | other | 1 | 15840 | 16052 |
| APU92906.1 | KY002061_p69 | nucleoside 2-deoxyribosyltransferase | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | -1 | 39504 | 39854 |
| APU92850.1 | KY002061_p13 | hypothetical protein | phrog_30984 | unknown function | unknown function | -1 | 4484 | 4816 |
| APU92858.1 | KY002061_p21 | hypothetical protein | phrog_8329 | unknown function | unknown function | 1 | 9367 | 9885 |
| APU92877.1 | KY002061_p40 | hypothetical protein | phrog_24659 | unknown function | unknown function | -1 | 17693 | 17878 |
| APU92912.1 | KY002061_p75 | hypothetical protein | phrog_27827 | unknown function | unknown function | -1 | 44707 | 45468 |
| APU92899.1 | KY002061_p62 | holin or antiholin | phrog_24402 | holin | lysis | 1 | 36719 | 37045 |
| APU92897.1 | KY002061_p60 | tail tip protein | phrog_469 | tail protein | tail | 1 | 32075 | 34603 |
| APU92876.1 | KY002061_p39 | prohead assembly protein | phrog_2468 | head morphogenesis | head and packaging | 1 | 16593 | 17552 |
| APU92855.1 | KY002061_p18 | large terminase subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 6337 | 8100 |
| APU92913.1 | KY002061_p76 | helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 45639 | 47300 |
| APU92922.1 | KY002061_p85 | hypothetical protein | phrog_289 | GTP-binding domain | other | 1 | 52272 | 52667 |
| APU92904.1 | KY002061_p67 | hypothetical protein | phrog_25980 | unknown function | unknown function | -1 | 38116 | 38349 |
| APU92870.1 | KY002061_p33 | deoxyuridine 5'-triphosphate nucleotidohydrolase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | -1 | 14900 | 15403 |
| APU92861.1 | KY002061_p24 | hypothetical protein | phrog_16556 | unknown function | unknown function | -1 | 10615 | 10776 |
| APU92857.1 | KY002061_p20 | hypothetical protein | phrog_9157 | unknown function | unknown function | 1 | 8982 | 9350 |
| APU92871.1 | KY002061_p34 | hypothetical protein | phrog_32742 | unknown function | unknown function | 1 | 15517 | 15843 |
| APU92841.1 | KY002061_p4 | hypothetical protein | phrog_8009 | unknown function | unknown function | -1 | 1477 | 1665 |
| APU92902.1 | KY002061_p65 | i-spanin component | phrog_1152 | Rz-like spanin | lysis | 1 | 37653 | 38051 |
| APU92910.1 | KY002061_p73 | hypothetical protein | phrog_7011 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 42695 | 43546 |
| APU92846.1 | KY002061_p9 | hypothetical protein | singleton | unknown function | unknown function | -1 | 3433 | 3612 |
| APU92894.1 | KY002061_p57 | hypothetical protein | phrog_384 | virion structural protein | head and packaging | 1 | 30720 | 31223 |
| APU92869.1 | KY002061_p32 | hypothetical protein | phrog_5086 | unknown function | unknown function | -1 | 14574 | 14900 |
| APU92884.1 | KY002061_p47 | hypothetical protein | phrog_19242 | unknown function | unknown function | 1 | 22237 | 22590 |
| APU92900.1 | KY002061_p63 | endolysin | phrog_465 | endolysin | lysis | 1 | 37042 | 37425 |
| APU92878.1 | KY002061_p41 | hypothetical protein | phrog_7033 | unknown function | unknown function | -1 | 18097 | 18372 |
| APU92867.1 | KY002061_p30 | hypothetical protein | phrog_27401 | unknown function | unknown function | -1 | 13976 | 14320 |
| APU92845.1 | KY002061_p8 | hypothetical protein | singleton | unknown function | unknown function | -1 | 3278 | 3436 |
| APU92847.1 | KY002061_p10 | hypothetical protein | singleton | unknown function | unknown function | -1 | 3609 | 3875 |
| APU92903.1 | KY002061_p66 | o-spanin component | phrog_2425 | unknown function | unknown function | 1 | 37888 | 38136 |
| APU92921.1 | KY002061_p84 | C-5 cytosine-specific DNA methylase | phrog_757 | DNA methyltransferase | other | 1 | 51571 | 52272 |
| APU92928.1 | KY002061_p91 | hypothetical protein | phrog_25538 | unknown function | unknown function | -1 | 54835 | 55716 |
| APU92874.1 | KY002061_p37 | NinH | phrog_268 | unknown function | unknown function | 1 | 16221 | 16409 |
| APU92864.1 | KY002061_p27 | hypothetical protein | phrog_2650 | unknown function | unknown function | -1 | 11320 | 12018 |
| APU92924.1 | KY002061_p87 | ParB-like protein | phrog_1033 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 53152 | 53919 |
| APU92840.1 | KY002061_p3 | hypothetical protein | phrog_5305 | unknown function | unknown function | -1 | 1271 | 1477 |
| APU92839.1 | KY002061_p2 | hypothetical protein | phrog_31759 | unknown function | unknown function | -1 | 1032 | 1235 |
| APU92879.1 | KY002061_p42 | hypothetical protein | phrog_3527 | unknown function | unknown function | -1 | 18377 | 18667 |
| APU92927.1 | KY002061_p90 | hypothetical protein | phrog_11861 | unknown function | unknown function | 1 | 54466 | 54804 |
| APU92851.1 | KY002061_p14 | hypothetical protein | phrog_8294 | unknown function | unknown function | -1 | 4774 | 4947 |
| APU92853.1 | KY002061_p16 | hypothetical protein | phrog_33811 | unknown function | unknown function | -1 | 5138 | 5413 |
| APU92882.1 | KY002061_p45 | major virion structural protein | phrog_673 | head scaffolding protein | head and packaging | 1 | 20741 | 21151 |
| APU92849.1 | KY002061_p12 | hypothetical protein | phrog_25300 | unknown function | unknown function | -1 | 4189 | 4491 |
| APU92863.1 | KY002061_p26 | hypothetical protein | phrog_8758 | unknown function | unknown function | -1 | 11117 | 11317 |
| APU92907.1 | KY002061_p70 | NinX | phrog_444 | unknown function | unknown function | -1 | 39854 | 40189 |
| APU92862.1 | KY002061_p25 | hypothetical protein | phrog_1972 | unknown function | unknown function | -1 | 10770 | 11099 |
| APU92895.1 | KY002061_p58 | enolase-like protein | phrog_396 | minor tail protein | tail | 1 | 31220 | 31726 |
| APU92915.1 | KY002061_p78 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 47845 | 48336 |
| APU92838.1 | KY002061_p1 | terminase small subunit | phrog_51 | terminase small subunit | head and packaging | 1 | 276 | 911 |
| APU92888.1 | KY002061_p51 | hypothetical protein | phrog_179 | tail terminator | connector | 1 | 24288 | 24710 |
| APU92842.1 | KY002061_p5 | hypothetical protein | phrog_1229 | unknown function | unknown function | -1 | 1775 | 2110 |
| APU92868.1 | KY002061_p31 | hypothetical protein | phrog_25244 | unknown function | unknown function | -1 | 14326 | 14577 |
| APU92898.1 | KY002061_p61 | tail fiber | phrog_14879 | tail fiber protein | tail | -1 | 34639 | 36690 |
| APU92919.1 | KY002061_p82 | lipoprotein | phrog_22517 | lipoprotein | other | 1 | 51169 | 51366 |
| APU92890.1 | KY002061_p53 | hypothetical protein | phrog_30881 | unknown function | unknown function | -1 | 26253 | 26876 |
| APU92889.1 | KY002061_p52 | major tail tube protein | phrog_290 | minor tail protein | tail | 1 | 24747 | 26204 |
| APU92848.1 | KY002061_p11 | hypothetical protein | phrog_38795 | unknown function | unknown function | -1 | 3911 | 4117 |
| APU92901.1 | KY002061_p64 | holin or anti-holin | phrog_1322 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 37436 | 37666 |
| APU92916.1 | KY002061_p79 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 48333 | 48506 |
| APU92844.1 | KY002061_p7 | recombination-associated protein or exonuclease | phrog_724 | exonuclease recombination-associated | DNA, RNA and nucleotide metabolism | -1 | 2361 | 3275 |
| APU92881.1 | KY002061_p44 | hypothetical protein | phrog_19463 | unknown function | unknown function | 1 | 19476 | 20741 |
| APU92856.1 | KY002061_p19 | hypothetical protein | phrog_9288 | unknown function | unknown function | 1 | 8226 | 8927 |
| APU92852.1 | KY002061_p15 | hypothetical protein | phrog_31372 | unknown function | unknown function | -1 | 4951 | 5145 |
| APU92909.1 | KY002061_p72 | DNA polymerase | phrog_1252 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 40758 | 42614 |
| APU92892.1 | KY002061_p54 | tail assembly chaperone | phrog_8233 | tail assembly chaperone | tail | 1 | 27015 | 27733 |
| APU92920.1 | KY002061_p83 | hypothetical protein | phrog_26050 | unknown function | unknown function | 1 | 51359 | 51574 |
| APU92914.1 | KY002061_p77 | exonuclease | phrog_255 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 47342 | 47848 |
| APU92885.1 | KY002061_p48 | hypothetical protein | phrog_21889 | unknown function | unknown function | 1 | 22963 | 23481 |
| APU92866.1 | KY002061_p29 | hypothetical protein | phrog_571 | unknown function | unknown function | -1 | 13625 | 13960 |
| APU92925.1 | KY002061_p88 | hypothetical protein | phrog_1380 | unknown function | unknown function | 1 | 53916 | 54107 |