Genomic map of Mycobacterium phage Empress (KY012363)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY012363
Definition
Mycobacterium phage Empress, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus.
DB of origin
NUCCORE
Length
57155
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
104
%GC
61.51
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APC46640.1 KY012363_p61 hypothetical protein phrog_5168 unknown function unknown function 1 40703 41167
APC46597.1 KY012363_p15 transposase DNA domain protein phrog_506 transposase integration and excision -1 13033 14253
APC46627.1 KY012363_p48 hypothetical protein phrog_2025 unknown function unknown function 1 36139 36429
APC46614.1 KY012363_p33 holin phrog_443 holin lysis 1 29950 30183
APC46646.1 KY012363_p68 DNA methylase phrog_6650 unknown function unknown function 1 44063 44758
APC46637.1 KY012363_p58 HTH DNA-binding protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 39956 40321
APC46634.1 KY012363_p55 WhiB phrog_1333 unknown function unknown function 1 38705 39202
APC46585.1 KY012363_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 571 2208
APC46643.1 KY012363_p65 hypothetical protein phrog_2070 unknown function unknown function 1 43102 43287
APC46644.1 KY012363_p66 hypothetical protein phrog_1311 unknown function unknown function 1 43265 43420
APC46653.1 KY012363_p75 hypothetical protein phrog_2080 unknown function unknown function 1 47566 47826
APC46641.1 KY012363_p62 RecA phrog_1366 unknown function unknown function 1 41164 42141
APC46635.1 KY012363_p56 hypothetical protein phrog_2096 unknown function unknown function 1 39199 39684
APC46658.1 KY012363_p81 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision 1 49087 49257
APC46686.1 KY012363_p90 hypothetical protein phrog_4126 unknown function unknown function 1 51280 51399
APC46603.1 KY012363_p21 minor tail protein phrog_2106 minor tail protein tail 1 23169 24332
APC46660.1 KY012363_p83 hypothetical protein phrog_647 unknown function unknown function 1 49521 49898
APC46586.1 KY012363_p3 portal protein phrog_104 portal protein head and packaging 1 2239 3609
APC46671.1 KY012363_p95 hypothetical protein phrog_1869 unknown function unknown function 1 52860 53024
APC46656.1 KY012363_p79 hypothetical protein phrog_2591 unknown function unknown function 1 48345 48593
APC46607.1 KY012363_p25 hypothetical protein phrog_754 minor tail protein tail 1 25613 26437
APC46631.1 KY012363_p52 hypothetical protein phrog_1797 unknown function unknown function 1 37322 38011
APC46642.1 KY012363_p63 hypothetical protein phrog_4657 unknown function unknown function 1 42138 42746
APC46598.1 KY012363_p16 minor tail protein phrog_106 minor tail protein tail 1 14363 16072
APC46667.1 KY012363_p91 hypothetical protein phrog_2278 unknown function unknown function 1 51396 51632
APC46639.1 KY012363_p60 hypothetical protein phrog_1834 unknown function unknown function 1 40473 40706
APC46602.1 KY012363_p20 D-ala D-ala carboypeptidase phrog_382 minor tail protein with lysin activity tail 1 21283 23172
APC46587.1 KY012363_p4 capsid maturation protease phrog_1522 head maturation protease head and packaging 1 3596 4351
APC46596.1 KY012363_p14 tape measure protein phrog_1942 tail length tape measure protein tail 1 9508 13032
APC46657.1 KY012363_p80 hypothetical protein phrog_14412 unknown function unknown function 1 48590 49090
APC46632.1 KY012363_p53 hypothetical protein phrog_1849 unknown function unknown function 1 38086 38364
APC46633.1 KY012363_p54 hypothetical protein phrog_658 unknown function unknown function 1 38361 38708
APC46679.1 KY012363_p103 hypothetitcal protein phrog_1693 unknown function unknown function 1 55860 56066
APC46680.1 KY012363_p104 N-acetylglucosaminyl transferace phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 56063 56686
APC46617.1 KY012363_p36 DNA Q-like exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 30798 31619
APC46595.1 KY012363_p12 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 8553 9104
APC46609.1 KY012363_p28 hypothetical protein phrog_932 unknown function unknown function 1 27085 27234
APC46628.1 KY012363_p49 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 36516 36713
APC46616.1 KY012363_p35 hypothetical protein phrog_2004 unknown function unknown function 1 30551 30811
APC46591.1 KY012363_p8 head-to-tail-connector protein phrog_763 head-tail adaptor connector 1 6443 6772
APC46618.1 KY012363_p37 hypothetical protein phrog_1791 unknown function unknown function 1 31635 31925
APC46659.1 KY012363_p82 hypothetical protein phrog_3381 unknown function unknown function 1 49301 49519
APC46652.1 KY012363_p74 hypothetical protein phrog_2447 replication initiation protein DNA, RNA and nucleotide metabolism 1 46718 47569
APC46584.1 KY012363_p1 terminase small subunit phrog_226 minor tail protein tail 1 108 563
APC46621.1 KY012363_p40 hypothetical protein phrog_2437 unknown function unknown function -1 32182 32331
APC46594.1 KY012363_p11 major tail subunit phrog_476 major tail protein tail 1 7533 8417
APC46676.1 KY012363_p100 hypothetical protein phrog_2057 unknown function unknown function 1 54008 54169
APC46604.1 KY012363_p22 hypothetical protein phrog_240 head protein head and packaging 1 24346 24687
APC46647.1 KY012363_p69 hypothetical protein phrog_1008 DNA methyltransferase other 1 44809 45546
APC46613.1 KY012363_p32 lysin B phrog_102 endolysin lysis 1 28933 29934
APC46636.1 KY012363_p57 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 39681 39959
APC46601.1 KY012363_p19 minor tail protein phrog_346 minor tail protein tail 1 18749 21286
APC46664.1 KY012363_p87 hypothetical protein phrog_1091 unknown function unknown function 1 50476 50655
APC46682.1 KY012363_p77 hypothetical protein phrog_1943 unknown function unknown function 1 48026 48220
APC46687.1 KY012363_p13 tail assembly chaperone phrog_15976 tail assembly chaperone tail 1 9055 9489
APC46619.1 KY012363_p38 hypothetical protein phrog_1839 unknown function unknown function 1 31915 32010
APC46615.1 KY012363_p34 hypothetical protein phrog_404 minor tail protein tail 1 30180 30554
APC46588.1 KY012363_p5 scaffolding protein phrog_2592 head scaffolding protein head and packaging 1 4378 5028
APC46625.1 KY012363_p46 immunity repressor phrog_2838 transcriptional repressor transcription regulation -1 35106 35678
APC46666.1 KY012363_p89 hypothetical protein phrog_8093 unknown function unknown function 1 51104 51283
APC46638.1 KY012363_p59 hypothetical protein phrog_2078 unknown function unknown function 1 40318 40473
APC46606.1 KY012363_p24 hypothetical protein phrog_2012 minor tail protein tail 1 24978 25616
APC46674.1 KY012363_p98 hypothetical protein phrog_1186 unknown function unknown function 1 53375 53776
APC46623.1 KY012363_p43 integrase phrog_1 integrase integration and excision 1 33009 34310
APC46665.1 KY012363_p88 hypothetical protein singleton unknown function unknown function 1 50655 51107
APC46648.1 KY012363_p70 hypothetical protein phrog_2001 unknown function unknown function 1 45572 45694
APC46608.1 KY012363_p27 hypothetical protein phrog_411 unknown function unknown function 1 26782 27078
APC46662.1 KY012363_p85 hypothetical protein phrog_6727 unknown function unknown function 1 50103 50291
APC46600.1 KY012363_p18 minor tail protein phrog_732 minor tail protein tail 1 17907 18752
APC46611.1 KY012363_p30 hypothetical protein phrog_747 unknown function unknown function 1 27432 27665
APC46599.1 KY012363_p17 minor tail protein phrog_110 minor tail protein tail 1 16157 17866
APC46593.1 KY012363_p10 head-to-tail-connector protein phrog_813 head-tail adaptor connector 1 7095 7499
APC46673.1 KY012363_p97 hypothetical protein phrog_3813 unknown function unknown function 1 53211 53378
APC46645.1 KY012363_p67 hypothetical protein phrog_2259 Rnase H DNA, RNA and nucleotide metabolism 1 43413 44066
APC46678.1 KY012363_p102 hypothetical protein phrog_26719 unknown function unknown function 1 55642 55857
APC46605.1 KY012363_p23 hypothetical protein phrog_2005 minor tail protein tail 1 24710 24964
APC46685.1 KY012363_p42 hypothetical protein phrog_22547 unknown function unknown function 1 32639 32827
APC46629.1 KY012363_p50 hypothetical protein phrog_2021 unknown function unknown function 1 36757 37140
APC46590.1 KY012363_p7 head-to-tail-connector protein phrog_2377 head-tail adaptor Ad1 connector 1 5877 6446
APC46649.1 KY012363_p71 hypothetical protein phrog_780 unknown function unknown function 1 45691 45918
APC46681.1 KY012363_p26 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 26441 26632
APC46630.1 KY012363_p51 hypothetical protein phrog_1816 unknown function unknown function 1 37137 37325
APC46589.1 KY012363_p6 major capsid protein phrog_267 major head protein head and packaging 1 5047 5868
APC46684.1 KY012363_p45 hypothetical protein phrog_7613 unknown function unknown function -1 34957 35103
APC46668.1 KY012363_p92 hypothetical protein phrog_2247 unknown function unknown function 1 51625 51891
APC46675.1 KY012363_p99 hypothetical protein phrog_1385 unknown function unknown function 1 53773 54015
APC46669.1 KY012363_p93 hypothetical protein phrog_1467 unknown function unknown function 1 51888 52529
APC46661.1 KY012363_p84 hypothetical protein phrog_2939 unknown function unknown function 1 49895 50110
APC46655.1 KY012363_p78 hypothetical protein phrog_9840 unknown function unknown function 1 48217 48348
APC46610.1 KY012363_p29 hypothetical protein phrog_1172 unknown function unknown function 1 27231 27365
APC46670.1 KY012363_p94 HTH DNA-binding protein phrog_2474 MerR-like transcriptional regulator transcription regulation 1 52639 52863
APC46672.1 KY012363_p96 hypothetical protein phrog_1694 unknown function unknown function 1 53031 53189
APC46626.1 KY012363_p47 HTH DNA-binding protein phrog_2104 unknown function unknown function 1 35720 36079
APC46677.1 KY012363_p101 galactosyltransferase phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 54196 55632
APC46651.1 KY012363_p73 hypothetical protein phrog_2451 unknown function unknown function 1 46580 46714
APC46654.1 KY012363_p76 hypothetical protein phrog_2730 unknown function unknown function 1 47823 48029
APC46622.1 KY012363_p41 DNA-binding protein phrog_66 excisionase and transcriptional regulator integration and excision -1 32383 32577
APC46612.1 KY012363_p31 lysin A phrog_700 endolysin lysis 1 27662 28933
APC46650.1 KY012363_p72 DNA methylase phrog_67 DNA methyltransferase other 1 45915 46583
APC46624.1 KY012363_p44 hypothetical protein phrog_1948 unknown function unknown function -1 34388 34843
APC46663.1 KY012363_p86 hypothetical protein phrog_1901 unknown function unknown function 1 50288 50479
APC46683.1 KY012363_p64 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 42743 43105
APC46620.1 KY012363_p39 hypothetical protein phrog_3693 unknown function unknown function -1 32048 32182
APC46592.1 KY012363_p9 head-to-tail-connector protein phrog_1929 head-tail connector protein connector 1 6779 7105