| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY014601 |
Definition |
Escherichia phage Utah, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Chivirus; unclassified Chivirus. |
DB of origin |
NUCCORE |
Length |
59024 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
73 |
%GC |
56.41 |
Number of singletons |
1 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD19344.1 | KY014601_p22 | major tail protein | phrog_807 | major tail protein with Ig-like domain | tail | 1 | 20002 | 21141 |
| APD19390.1 | KY014601_p68 | hypothetical protein | phrog_9514 | unknown function | unknown function | 1 | 55683 | 56231 |
| APD19362.1 | KY014601_p40 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | -1 | 41823 | 42284 |
| APD19350.1 | KY014601_p29 | hypothetical protein | phrog_1196 | tail assembly chaperone | tail | 1 | 28993 | 29232 |
| APD19380.1 | KY014601_p58 | hypothetical protein | phrog_7965 | unknown function | unknown function | -1 | 51507 | 51869 |
| APD19376.1 | KY014601_p54 | hypothetical protein | phrog_6886 | unknown function | unknown function | -1 | 48986 | 49726 |
| APD19336.1 | KY014601_p14 | portal protein | phrog_21 | portal protein | head and packaging | 1 | 13636 | 15315 |
| APD19330.1 | KY014601_p8 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 6903 | 8942 |
| APD19394.1 | KY014601_p72 | hypothetical protein | phrog_7646 | unknown function | unknown function | 1 | 57987 | 58238 |
| APD19324.1 | KY014601_p1 | HTH DNA binding domain protein | phrog_2339 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 614 | 901 |
| APD19393.1 | KY014601_p71 | hypothetical protein | phrog_8059 | unknown function | unknown function | 1 | 57788 | 57994 |
| APD19325.1 | KY014601_p3 | transcriptional regulator | phrog_7401 | unknown function | unknown function | -1 | 3524 | 3805 |
| APD19342.1 | KY014601_p20 | hypothetical protein | phrog_27 | tail completion or Neck1 protein | connector | 1 | 18862 | 19488 |
| APD19329.1 | KY014601_p7 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 6240 | 6836 |
| APD19323.1 | KY014601_p2 | DNA primase | phrog_1156 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 942 | 3527 |
| APD19384.1 | KY014601_p62 | hypothetical protein | singleton | unknown function | unknown function | 1 | 53581 | 53739 |
| APD19388.1 | KY014601_p66 | hypothetical protein | phrog_10310 | unknown function | unknown function | 1 | 54834 | 55457 |
| APD19386.1 | KY014601_p64 | hypothetical protein | phrog_3199 | unknown function | unknown function | 1 | 54077 | 54616 |
| APD19360.1 | KY014601_p38 | lysis protein A | phrog_873 | endolysin | head and packaging | 1 | 40728 | 41441 |
| APD19387.1 | KY014601_p65 | hypothetical protein | phrog_2385 | unknown function | unknown function | 1 | 54631 | 54831 |
| APD19382.1 | KY014601_p60 | hypothetical protein | phrog_7942 | unknown function | unknown function | -1 | 52157 | 52597 |
| APD19335.1 | KY014601_p13 | head-to-tail joining protein | phrog_75 | head-tail adaptor Ad1 | connector | 1 | 13385 | 13639 |
| APD19368.1 | KY014601_p46 | hypothetical protein | phrog_9072 | thymidylate synthase complementing protein | DNA, RNA and nucleotide metabolism | -1 | 44475 | 44987 |
| APD19383.1 | KY014601_p61 | hypothetical protein | phrog_6647 | unknown function | unknown function | -1 | 52669 | 53040 |
| APD19370.1 | KY014601_p48 | hypothetical protein | phrog_8705 | unknown function | unknown function | -1 | 45213 | 45434 |
| APD19354.1 | KY014601_p32 | hypothetical protein | phrog_2448 | unknown function | unknown function | 1 | 33862 | 34869 |
| APD19340.1 | KY014601_p18 | hypothetical protein | phrog_7559 | unknown function | unknown function | 1 | 18201 | 18494 |
| APD19328.1 | KY014601_p6 | Cas4-like protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 4848 | 6185 |
| APD19357.1 | KY014601_p35 | hypothetical protein | phrog_10924 | unknown function | unknown function | 1 | 36890 | 38116 |
| APD19361.2 | KY014601_p39 | hypothetical protein | phrog_1026 | Rz-like spanin | lysis | 1 | 41438 | 41692 |
| APD19359.1 | KY014601_p37 | lysis protein B | phrog_7686 | Rz-like spanin | lysis | 1 | 40386 | 40724 |
| APD19364.1 | KY014601_p42 | hypothetical protein | phrog_8098 | unknown function | unknown function | -1 | 42641 | 43354 |
| APD19378.1 | KY014601_p56 | hypothetical protein | phrog_7200 | unknown function | unknown function | -1 | 50202 | 50435 |
| APD19379.1 | KY014601_p57 | exonuclease | phrog_724 | exonuclease recombination-associated | DNA, RNA and nucleotide metabolism | -1 | 50438 | 51526 |
| APD19392.1 | KY014601_p70 | hypothetical protein | phrog_10087 | unknown function | unknown function | 1 | 56575 | 57735 |
| APD19326.1 | KY014601_p4 | hypothetical protein | phrog_7721 | unknown function | unknown function | 1 | 4048 | 4464 |
| APD19381.1 | KY014601_p59 | hypothetical protein | phrog_7734 | unknown function | unknown function | -1 | 51835 | 52170 |
| APD19356.1 | KY014601_p34 | hypothetical protein | phrog_2448 | unknown function | unknown function | 1 | 35856 | 36875 |
| APD19371.1 | KY014601_p49 | hypothetical protein | phrog_9067 | unknown function | unknown function | -1 | 45431 | 45625 |
| APD19348.1 | KY014601_p26 | distal tail protein | phrog_1082 | tail assembly protein | tail | 1 | 26235 | 27923 |
| APD19341.1 | KY014601_p19 | hypothetical protein | phrog_4858 | unknown function | unknown function | 1 | 18497 | 18862 |
| APD19331.1 | KY014601_p9 | endonuclease | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 8944 | 9231 |
| APD19389.1 | KY014601_p67 | hypothetical protein | phrog_7744 | unknown function | unknown function | 1 | 55469 | 55672 |
| APD19327.1 | KY014601_p5 | hypothetical protein | phrog_8318 | unknown function | unknown function | 1 | 4526 | 4855 |
| APD19391.1 | KY014601_p69 | hypothetical protein | phrog_8635 | unknown function | unknown function | 1 | 56228 | 56449 |
| APD19373.1 | KY014601_p51 | DNA methylase domain protein | phrog_111 | DNA methyltransferase | other | -1 | 46532 | 47218 |
| APD19332.1 | KY014601_p10 | DNA helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 9194 | 10753 |
| APD19352.1 | KY014601_p27 | hypothetical protein | phrog_778 | tail assembly protein | tail | 1 | 27933 | 28751 |
| APD19339.1 | KY014601_p17 | major capsid protein | phrog_29 | major head protein | head and packaging | 1 | 17075 | 18139 |
| APD19345.1 | KY014601_p23 | tail assembly chaperone | phrog_11703 | tail length tape measure protein | tail | 1 | 21238 | 21941 |
| APD19374.1 | KY014601_p52 | hypothetical protein | phrog_8386 | unknown function | unknown function | -1 | 47218 | 48318 |
| APD19395.1 | KY014601_p73 | hypothetical protein | phrog_8116 | unknown function | unknown function | 1 | 58231 | 58482 |
| APD19353.1 | KY014601_p31 | tail fiber protein | phrog_7049 | tail fiber protein | tail | 1 | 33112 | 33852 |
| APD19377.1 | KY014601_p55 | hypothetical protein | phrog_7587 | unknown function | unknown function | -1 | 49922 | 50197 |
| APD19337.1 | KY014601_p15 | capsid maturation protease | phrog_53 | head maturation protease | head and packaging | 1 | 15312 | 16628 |
| APD19375.1 | KY014601_p53 | hypothetical protein | phrog_8641 | unknown function | unknown function | -1 | 48315 | 48989 |
| APD19338.1 | KY014601_p16 | decorator protein D | phrog_49 | head decoration | head and packaging | 1 | 16643 | 17062 |
| APD19363.1 | KY014601_p41 | hypothetical protein | phrog_18367 | unknown function | unknown function | -1 | 42281 | 42565 |
| APD19366.1 | KY014601_p44 | hypothetical protein | phrog_9301 | unknown function | unknown function | -1 | 43805 | 44116 |
| APD19346.1 | KY014601_p24 | tail assembly chaperone | phrog_5260 | tail protein | tail | 1 | 21238 | 21699 |
| APD19367.1 | KY014601_p45 | hypothetical protein | phrog_3012 | unknown function | unknown function | -1 | 44113 | 44391 |
| APD19333.1 | KY014601_p11 | TerS | phrog_141 | terminase small subunit | head and packaging | 1 | 10740 | 11309 |
| APD19347.1 | KY014601_p25 | tape measure | phrog_2335 | tail length tape measure protein | tail | 1 | 21934 | 26229 |
| APD19355.1 | KY014601_p33 | hypothetical protein | phrog_2448 | unknown function | unknown function | 1 | 34880 | 35842 |
| APD19369.1 | KY014601_p47 | hypothetical protein | phrog_9722 | unknown function | unknown function | -1 | 44969 | 45223 |
| APD19334.1 | KY014601_p12 | TerL | phrog_15 | terminase large subunit | head and packaging | 1 | 11299 | 13374 |
| APD19385.1 | KY014601_p63 | hypothetical protein | phrog_4445 | unknown function | unknown function | 1 | 53801 | 54058 |
| APD19372.1 | KY014601_p50 | hypothetical protein | phrog_8209 | unknown function | unknown function | -1 | 45636 | 46454 |
| APD19358.1 | KY014601_p36 | hypothetical protein | phrog_7226 | unknown function | unknown function | 1 | 38126 | 40321 |
| APD19365.1 | KY014601_p43 | hypothetical protein | phrog_8264 | unknown function | unknown function | -1 | 43356 | 43808 |
| APD19343.1 | KY014601_p21 | hypothetical protein | phrog_5078 | tail terminator | connector | 1 | 19485 | 19988 |
| APD19349.1 | KY014601_p28 | tail assembly protein | phrog_1180 | tail assembly chaperone | tail | 1 | 28763 | 28993 |
| APD19351.1 | KY014601_p30 | minor tail protein | phrog_6284 | tail protein | tail | 1 | 29222 | 33112 |