| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065449 |
Definition |
Streptococcus phage IPP5, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
. |
DB of origin |
NUCCORE |
Length |
33495 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
47 |
%GC |
38.89 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD21545.1 | KY065449_p26 | site-specific recombinase integrase family protein | phrog_216 | integrase | integration and excision | 1 | 12010 | 12552 |
| APD21565.1 | KY065449_p46 | LL-H family holin | phrog_608 | holin | lysis | 1 | 32203 | 32535 |
| APD21547.1 | KY065449_p28 | hypothetical protein | phrog_3567 | unknown function | unknown function | 1 | 13442 | 13921 |
| APD21561.1 | KY065449_p42 | hypothetical protein | phrog_4793 | unknown function | unknown function | 1 | 31238 | 31354 |
| APD21552.1 | KY065449_p33 | hypothetical protein | phrog_3305 | virion structural protein | head and packaging | 1 | 18660 | 18995 |
| APD21560.1 | KY065449_p41 | PblB | phrog_1210 | PblB-type receptor binding | other | 1 | 24780 | 31241 |
| APD21526.1 | KY065449_p7 | hypothetical protein | phrog_20017 | unknown function | unknown function | 1 | 5179 | 5331 |
| APD21549.1 | KY065449_p30 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 15635 | 16777 |
| APD21543.1 | KY065449_p24 | hypothetical protein | phrog_25993 | unknown function | unknown function | 1 | 11293 | 11415 |
| APD21546.1 | KY065449_p27 | HNH endonuclease domain-containing protein | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 12982 | 13299 |
| APD21558.1 | KY065449_p39 | tail tape measure family protein | phrog_58 | tail length tape measure protein | tail | 1 | 21322 | 24060 |
| APD21520.1 | KY065449_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1146 |
| APD21522.1 | KY065449_p3 | transcriptional modulator of MazE/toxin MazF | phrog_13411 | MazF-like growth inhibitor | moron, auxiliary metabolic gene and host takeover | -1 | 2905 | 3339 |
| APD21555.1 | KY065449_p36 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 19631 | 19975 |
| APD21535.1 | KY065449_p16 | hypothetical protein | phrog_3873 | unknown function | unknown function | -1 | 8639 | 8860 |
| APD21525.1 | KY065449_p6 | hypothetical protein | phrog_4761 | unknown function | unknown function | 1 | 4871 | 5008 |
| APD21536.1 | KY065449_p17 | hypothetical protein | phrog_2317 | unknown function | unknown function | 1 | 8969 | 9124 |
| APD21551.1 | KY065449_p32 | capsid family protein | phrog_10 | major head protein | head and packaging | 1 | 17381 | 18634 |
| APD21550.1 | KY065449_p31 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 16824 | 17366 |
| APD21542.1 | KY065449_p23 | hypothetical protein | phrog_2003 | unknown function | unknown function | 1 | 11006 | 11293 |
| APD21553.1 | KY065449_p34 | head-tail adaptor | phrog_3332 | head-tail adaptor | connector | 1 | 18992 | 19297 |
| APD21563.1 | KY065449_p44 | hypothetical protein | phrog_1164 | unknown function | unknown function | 1 | 31541 | 31891 |
| APD21564.1 | KY065449_p45 | hypothetical protein | phrog_1625 | involved in bacteriocin production or immunity | moron, auxiliary metabolic gene and host takeover | 1 | 31900 | 32199 |
| APD21528.1 | KY065449_p9 | hypothetical protein | phrog_27541 | unknown function | unknown function | 1 | 5994 | 6233 |
| APD21534.1 | KY065449_p15 | hypothetical protein | phrog_4194 | unknown function | unknown function | 1 | 8548 | 8685 |
| APD21532.1 | KY065449_p13 | DNA replication protein | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 7525 | 8379 |
| APD21530.1 | KY065449_p11 | Cro/CI family transcriptional regulator | phrog_3 | transcriptional repressor | transcription regulation | 1 | 6425 | 6652 |
| APD21541.1 | KY065449_p22 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 10524 | 11006 |
| APD21539.1 | KY065449_p20 | hypothetical protein | phrog_1555 | unknown function | unknown function | 1 | 9864 | 10166 |
| APD21554.1 | KY065449_p35 | hypothetical protein | phrog_3334 | unknown function | unknown function | 1 | 19297 | 19644 |
| APD21538.1 | KY065449_p19 | lipoprotein | phrog_1490 | lipoprotein | other | 1 | 9528 | 9851 |
| APD21527.1 | KY065449_p8 | hypothetical protein | phrog_3634 | unknown function | unknown function | -1 | 5285 | 5938 |
| APD21531.1 | KY065449_p12 | hypothetical protein | phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 6649 | 7515 |
| APD21562.1 | KY065449_p43 | hypothetical protein | phrog_1137 | unknown function | unknown function | 1 | 31335 | 31538 |
| APD21556.1 | KY065449_p37 | major tail protein | phrog_2634 | major tail protein | tail | 1 | 19989 | 20657 |
| APD21537.1 | KY065449_p18 | hypothetical protein | phrog_5238 | unknown function | unknown function | 1 | 9227 | 9517 |
| APD21523.1 | KY065449_p4 | transcriptional repressor | phrog_4 | transcriptional repressor | transcription regulation | -1 | 3525 | 4349 |
| APD21524.1 | KY065449_p5 | hypothetical protein | phrog_5570 | unknown function | unknown function | 1 | 4523 | 4798 |
| APD21557.1 | KY065449_p38 | hypothetical protein | phrog_3343 | unknown function | unknown function | 1 | 20659 | 21135 |
| APD21521.1 | KY065449_p2 | hypothetical protein | phrog_1412 | antitoxin mazE-like | moron, auxiliary metabolic gene and host takeover | -1 | 1445 | 2188 |
| APD21529.1 | KY065449_p10 | hypothetical protein | phrog_36607 | unknown function | unknown function | -1 | 6160 | 6351 |
| APD21533.1 | KY065449_p14 | hypothetical protein | phrog_11309 | unknown function | unknown function | 1 | 8318 | 8536 |
| APD21540.1 | KY065449_p21 | hypothetical protein | phrog_834 | unknown function | unknown function | 1 | 10205 | 10522 |
| APD21566.1 | KY065449_p47 | lytic amidase | phrog_1110 | endolysin | lysis | 1 | 32539 | 33495 |
| APD21559.1 | KY065449_p40 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | 1 | 24057 | 24779 |
| APD21548.1 | KY065449_p29 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 13914 | 15626 |
| APD21544.1 | KY065449_p25 | transcriptional activator | phrog_36 | transcriptional regulator | transcription regulation | 1 | 11437 | 11901 |