| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065450 |
Definition |
Streptococcus phage IPP8, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
40080 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
60 |
%GC |
40.12 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD21616.1 | KY065450_p50 | major tail protein | phrog_158 | major tail protein | tail | 1 | 26192 | 26605 |
| APD21618.1 | KY065450_p52 | hypothetical protein | phrog_2066 | unknown function | unknown function | 1 | 27029 | 27379 |
| APD21614.1 | KY065450_p48 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 25309 | 25824 |
| APD21581.1 | KY065450_p15 | hypothetical protein | phrog_633 | transcriptional regulator | transcription regulation | 1 | 5187 | 5528 |
| APD21576.1 | KY065450_p10 | hypothetical protein | phrog_3873 | unknown function | unknown function | -1 | 3960 | 4181 |
| APD21589.1 | KY065450_p23 | NTP-binding protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 9306 | 10133 |
| APD21622.1 | KY065450_p56 | hypothetical protein | phrog_1137 | unknown function | unknown function | 1 | 37920 | 38123 |
| APD21603.1 | KY065450_p37 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 19115 | 20584 |
| APD21579.1 | KY065450_p13 | hypothetical protein | phrog_2648 | unknown function | unknown function | 1 | 4793 | 4987 |
| APD21569.1 | KY065450_p3 | hypothetical protein | phrog_6701 | unknown function | unknown function | -1 | 1671 | 2150 |
| APD21582.1 | KY065450_p16 | hypothetical protein | phrog_2044 | RNA polymerase beta subunit | DNA, RNA and nucleotide metabolism | 1 | 5529 | 5759 |
| APD21574.1 | KY065450_p8 | DNA-binding protein | phrog_1337 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 3655 | 3846 |
| APD21568.1 | KY065450_p2 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 1270 | 1650 |
| APD21625.1 | KY065450_p59 | LL-H family holin | phrog_608 | holin | lysis | 1 | 38788 | 39120 |
| APD21573.1 | KY065450_p7 | hypothetical protein | phrog_7607 | unknown function | unknown function | -1 | 3351 | 3590 |
| APD21613.1 | KY065450_p47 | hypothetical protein | phrog_2168 | unknown function | unknown function | 1 | 24996 | 25334 |
| APD21584.1 | KY065450_p18 | hypothetical protein | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 6488 | 6970 |
| APD21594.1 | KY065450_p28 | hypothetical protein | phrog_4019 | unknown function | unknown function | 1 | 13443 | 13781 |
| APD21571.1 | KY065450_p5 | transcriptional regulator, Cro/CI family | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2578 | 2934 |
| APD21592.1 | KY065450_p26 | hypothetical protein | phrog_1313 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 11653 | 13005 |
| APD21609.1 | KY065450_p43 | hypothetical protein | phrog_544 | major head protein | head and packaging | 1 | 23485 | 24330 |
| APD21591.1 | KY065450_p25 | hypothetical protein | phrog_695 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 10829 | 11650 |
| APD21604.1 | KY065450_p38 | head morphogenesis protein | phrog_2841 | minor head protein | head and packaging | 1 | 20547 | 22043 |
| APD21599.1 | KY065450_p33 | hypothetical protein | phrog_3476 | unknown function | unknown function | 1 | 15158 | 15529 |
| APD21583.1 | KY065450_p17 | hypothetical protein | phrog_1891 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 5731 | 6495 |
| APD21572.1 | KY065450_p6 | hypothetical protein | phrog_6987 | unknown function | unknown function | 1 | 3233 | 3433 |
| APD21621.1 | KY065450_p55 | PblB | phrog_1210 | PblB-type receptor binding | other | 1 | 31383 | 37826 |
| APD21585.1 | KY065450_p19 | hypothetical protein | phrog_1341 | unknown function | unknown function | 1 | 6970 | 7329 |
| APD21586.1 | KY065450_p20 | hypothetical protein | phrog_1981 | unknown function | unknown function | 1 | 7329 | 7814 |
| APD21597.1 | KY065450_p31 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 14248 | 14751 |
| APD21624.1 | KY065450_p58 | hypothetical protein | phrog_1625 | involved in bacteriocin production or immunity | moron, auxiliary metabolic gene and host takeover | 1 | 38485 | 38784 |
| APD21608.1 | KY065450_p42 | scaffold protein | phrog_172 | head scaffolding protein | head and packaging | 1 | 22894 | 23478 |
| APD21570.1 | KY065450_p4 | hypothetical protein | phrog_10787 | unknown function | unknown function | -1 | 2154 | 2576 |
| APD21567.1 | KY065450_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1128 |
| APD21588.1 | KY065450_p22 | hypothetical protein | phrog_2486 | unknown function | unknown function | 1 | 8989 | 9306 |
| APD21577.1 | KY065450_p11 | hypothetical protein | phrog_2317 | unknown function | unknown function | 1 | 4301 | 4444 |
| APD21615.1 | KY065450_p49 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 25821 | 26189 |
| APD21598.1 | KY065450_p32 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 14748 | 15161 |
| APD21575.1 | KY065450_p9 | hypothetical protein | phrog_4194 | unknown function | unknown function | 1 | 3869 | 4006 |
| APD21578.1 | KY065450_p12 | hypothetical protein | phrog_2273 | unknown function | unknown function | 1 | 4524 | 4796 |
| APD21580.1 | KY065450_p14 | hypothetical protein | phrog_5054 | unknown function | unknown function | 1 | 4984 | 5175 |
| APD21596.1 | KY065450_p30 | hypothetical protein | phrog_834 | unknown function | unknown function | 1 | 13932 | 14246 |
| APD21623.1 | KY065450_p57 | hypothetical protein | phrog_1164 | unknown function | unknown function | 1 | 38126 | 38476 |
| APD21607.1 | KY065450_p41 | hypothetical protein | phrog_774 | unknown function | unknown function | 1 | 22512 | 22724 |
| APD21587.1 | KY065450_p21 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 7777 | 8970 |
| APD21601.1 | KY065450_p35 | terminase small subunit | phrog_51 | terminase small subunit | head and packaging | 1 | 17354 | 17827 |
| APD21590.1 | KY065450_p24 | hypothetical protein | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 10153 | 10656 |
| APD21605.1 | KY065450_p39 | hypothetical protein | phrog_3755 | unknown function | unknown function | 1 | 22194 | 22367 |
| APD21619.1 | KY065450_p53 | TMP repeat family protein | phrog_1535 | tail length tape measure protein | tail | 1 | 27366 | 31019 |
| APD21617.1 | KY065450_p51 | hypothetical protein | phrog_183 | tail chaperone protein | tail | 1 | 26610 | 26990 |
| APD21600.1 | KY065450_p34 | hypothetical protein | phrog_36 | transcriptional regulator | transcription regulation | 1 | 15603 | 16037 |
| APD21593.1 | KY065450_p27 | hypothetical protein | phrog_1489 | unknown function | unknown function | 1 | 13291 | 13443 |
| APD21626.1 | KY065450_p60 | lytic amidase | phrog_1110 | endolysin | lysis | 1 | 39124 | 40080 |
| APD21606.1 | KY065450_p40 | hypothetical protein | phrog_5469 | unknown function | unknown function | 1 | 22393 | 22557 |
| APD21611.1 | KY065450_p45 | hypothetical protein | phrog_933 | unknown function | unknown function | 1 | 24514 | 24702 |
| APD21612.1 | KY065450_p46 | head-tail connector protein | phrog_132 | head-tail adaptor | connector | 1 | 24704 | 25015 |
| APD21620.1 | KY065450_p54 | hypothetical protein | phrog_1194 | unknown function | unknown function | 1 | 31028 | 31378 |
| APD21610.1 | KY065450_p44 | hypothetical protein | phrog_2250 | unknown function | unknown function | 1 | 24342 | 24524 |
| APD21595.1 | KY065450_p29 | hypothetical protein | phrog_3606 | unknown function | unknown function | 1 | 13783 | 13932 |
| APD21602.1 | KY065450_p36 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 17805 | 19103 |