| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065452 |
Definition |
Streptococcus phage IPP10, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
40648 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
63 |
%GC |
40.04 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD21722.1 | KY065452_p33 | hypothetical protein | phrog_6716 | unknown function | unknown function | 1 | 14832 | 15152 |
| APD21730.1 | KY065452_p41 | metal dependent phosphohydrolase, HD region | phrog_990 | metal-dependent phosphohydrolase | other | 1 | 21431 | 21844 |
| APD21695.1 | KY065452_p6 | hypothetical protein | phrog_6987 | unknown function | unknown function | 1 | 3231 | 3431 |
| APD21699.1 | KY065452_p10 | hypothetical protein | phrog_7409 | unknown function | unknown function | -1 | 3980 | 4198 |
| APD21710.1 | KY065452_p21 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 7791 | 8984 |
| APD21717.1 | KY065452_p28 | hypothetical protein | phrog_1489 | unknown function | unknown function | 1 | 13307 | 13459 |
| APD21721.1 | KY065452_p32 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 14264 | 14770 |
| APD21734.1 | KY065452_p45 | capsid and scaffold protein | phrog_172 | head scaffolding protein | head and packaging | 1 | 22656 | 23180 |
| APD21704.1 | KY065452_p15 | hypothetical protein | phrog_633 | transcriptional regulator | transcription regulation | 1 | 5201 | 5542 |
| APD21736.1 | KY065452_p47 | hypothetical protein | phrog_933 | unknown function | unknown function | 1 | 24238 | 24426 |
| APD21719.1 | KY065452_p30 | hypothetical protein | phrog_3606 | unknown function | unknown function | 1 | 13799 | 13948 |
| APD21712.1 | KY065452_p23 | NTP-binding protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 9320 | 10147 |
| APD21707.1 | KY065452_p18 | hypothetical protein | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 6502 | 6984 |
| APD21749.1 | KY065452_p60 | hypothetical protein | phrog_1164 | unknown function | unknown function | 1 | 38576 | 38926 |
| APD21701.1 | KY065452_p12 | hypothetical protein | phrog_2273 | unknown function | unknown function | 1 | 4538 | 4810 |
| APD21713.1 | KY065452_p24 | hypothetical protein | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 10167 | 10673 |
| APD21733.1 | KY065452_p44 | hypothetical protein | phrog_774 | unknown function | unknown function | 1 | 22274 | 22486 |
| APD21751.1 | KY065452_p62 | LL-H family holin | phrog_608 | holin | lysis | 1 | 39356 | 39688 |
| APD21706.1 | KY065452_p17 | hypothetical protein | phrog_1891 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 5745 | 6509 |
| APD21711.1 | KY065452_p22 | hypothetical protein | phrog_2486 | unknown function | unknown function | 1 | 9003 | 9320 |
| APD21696.1 | KY065452_p7 | hypothetical protein | phrog_7607 | unknown function | unknown function | -1 | 3349 | 3588 |
| APD21731.1 | KY065452_p42 | hypothetical protein | phrog_419 | unknown function | unknown function | 1 | 21887 | 22150 |
| APD21748.1 | KY065452_p59 | hypothetical protein | phrog_1137 | unknown function | unknown function | 1 | 38370 | 38573 |
| APD21720.1 | KY065452_p31 | hypothetical protein | phrog_834 | unknown function | unknown function | 1 | 13948 | 14262 |
| APD21729.1 | KY065452_p40 | hypothetical protein | phrog_3514 | unknown function | unknown function | 1 | 21225 | 21434 |
| APD21728.1 | KY065452_p39 | head morphogenesis protein | phrog_2841 | minor head protein | head and packaging | 1 | 19640 | 21223 |
| APD21745.1 | KY065452_p56 | hypothetical protein | phrog_1194 | unknown function | unknown function | 1 | 30713 | 31063 |
| APD21709.1 | KY065452_p20 | hypothetical protein | phrog_1981 | unknown function | unknown function | 1 | 7343 | 7828 |
| APD21739.1 | KY065452_p50 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 25033 | 25548 |
| APD21747.1 | KY065452_p58 | hypothetical protein | phrog_4793 | unknown function | unknown function | 1 | 38273 | 38389 |
| APD21725.1 | KY065452_p36 | terminase small subunit | phrog_51 | terminase small subunit | head and packaging | 1 | 16441 | 16920 |
| APD21744.1 | KY065452_p55 | tail length tape-measure protein | phrog_1535 | tail length tape measure protein | tail | 1 | 27090 | 30704 |
| APD21732.1 | KY065452_p43 | hypothetical protein | phrog_5469 | unknown function | unknown function | 1 | 22155 | 22319 |
| APD21741.1 | KY065452_p52 | major tail protein | phrog_158 | major tail protein | tail | 1 | 25916 | 26329 |
| APD21735.1 | KY065452_p46 | carbohydrate-binding family V/XII protein | phrog_422 | major head protein | head and packaging | 1 | 23203 | 24228 |
| APD21702.1 | KY065452_p13 | hypothetical protein | phrog_2648 | unknown function | unknown function | 1 | 4807 | 5001 |
| APD21690.1 | KY065452_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1128 |
| APD21700.1 | KY065452_p11 | hypothetical protein | phrog_2317 | unknown function | unknown function | 1 | 4315 | 4458 |
| APD21708.1 | KY065452_p19 | hypothetical protein | phrog_1341 | unknown function | unknown function | 1 | 6984 | 7343 |
| APD21698.1 | KY065452_p9 | hypothetical protein | phrog_4192 | unknown function | unknown function | 1 | 3867 | 4025 |
| APD21740.1 | KY065452_p51 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 25545 | 25913 |
| APD21692.1 | KY065452_p3 | hypothetical protein | phrog_6701 | unknown function | unknown function | -1 | 1671 | 2150 |
| APD21715.1 | KY065452_p26 | hypothetical protein | phrog_695 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 10846 | 11667 |
| APD21694.1 | KY065452_p5 | transcriptional regulator, Cro/CI family | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2578 | 2931 |
| APD21746.1 | KY065452_p57 | PblB | phrog_1210 | PblB-type receptor binding | other | 1 | 31068 | 38276 |
| APD21714.1 | KY065452_p25 | hypothetical protein | phrog_13710 | unknown function | unknown function | 1 | 10754 | 10858 |
| APD21718.1 | KY065452_p29 | hypothetical protein | phrog_4019 | unknown function | unknown function | 1 | 13459 | 13797 |
| APD21693.1 | KY065452_p4 | hypothetical protein | phrog_10787 | unknown function | unknown function | -1 | 2154 | 2576 |
| APD21724.1 | KY065452_p35 | hypothetical protein | phrog_36 | transcriptional regulator | transcription regulation | 1 | 15584 | 16006 |
| APD21738.1 | KY065452_p49 | hypothetical protein | phrog_2168 | unknown function | unknown function | 1 | 24720 | 25058 |
| APD21703.1 | KY065452_p14 | hypothetical protein | phrog_5054 | unknown function | unknown function | 1 | 4998 | 5189 |
| APD21743.1 | KY065452_p54 | hypothetical protein | phrog_2066 | unknown function | unknown function | 1 | 26753 | 27103 |
| APD21723.1 | KY065452_p34 | hypothetical protein | phrog_3476 | unknown function | unknown function | 1 | 15149 | 15514 |
| APD21742.1 | KY065452_p53 | hypothetical protein | phrog_183 | tail chaperone protein | tail | 1 | 26334 | 26714 |
| APD21750.1 | KY065452_p61 | holin 1 | phrog_199 | holin | lysis | 1 | 38936 | 39352 |
| APD21705.1 | KY065452_p16 | hypothetical protein | phrog_2044 | RNA polymerase beta subunit | DNA, RNA and nucleotide metabolism | 1 | 5543 | 5773 |
| APD21737.1 | KY065452_p48 | head-tail connector protein | phrog_132 | head-tail adaptor | connector | 1 | 24428 | 24739 |
| APD21726.1 | KY065452_p37 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 16898 | 18196 |
| APD21727.1 | KY065452_p38 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 18208 | 19677 |
| APD21697.1 | KY065452_p8 | DNA-binding protein | phrog_1337 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 3653 | 3844 |
| APD21716.1 | KY065452_p27 | hypothetical protein | phrog_1313 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 11670 | 13013 |
| APD21691.1 | KY065452_p2 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 1270 | 1650 |
| APD21752.1 | KY065452_p63 | lytic amidase | phrog_1110 | endolysin | lysis | 1 | 39692 | 40648 |