| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065453 |
Definition |
Streptococcus phage IPP11, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
37518 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
56 |
%GC |
40.59 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD21762.1 | KY065453_p10 | hypothetical protein | phrog_2798 | unknown function | unknown function | 1 | 4037 | 4198 |
| APD21789.1 | KY065453_p37 | hypothetical protein | phrog_2955 | unknown function | unknown function | 1 | 16594 | 16812 |
| APD21781.1 | KY065453_p29 | type II DNA modification methyltransferase | phrog_116 | DNA methyltransferase | other | 1 | 10485 | 11567 |
| APD21776.1 | KY065453_p24 | hypothetical protein | phrog_834 | unknown function | unknown function | 1 | 8961 | 9278 |
| APD21761.1 | KY065453_p9 | hypothetical protein | phrog_3168 | unknown function | unknown function | 1 | 3829 | 4026 |
| APD21758.1 | KY065453_p6 | hypothetical protein | phrog_3873 | unknown function | unknown function | -1 | 3111 | 3332 |
| APD21779.1 | KY065453_p27 | hypothetical protein | phrog_4252 | unknown function | unknown function | 1 | 10070 | 10231 |
| APD21807.1 | KY065453_p55 | LL-H family holin | phrog_608 | holin | lysis | 1 | 36226 | 36558 |
| APD21759.1 | KY065453_p7 | hypothetical protein | phrog_2317 | unknown function | unknown function | 1 | 3451 | 3597 |
| APD21802.1 | KY065453_p50 | PblB | phrog_1210 | PblB-type receptor binding | other | 1 | 26049 | 35147 |
| APD21801.1 | KY065453_p49 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | 1 | 25326 | 26048 |
| APD21793.1 | KY065453_p41 | hypothetical protein | phrog_3673 | Arc-like repressor | transcription regulation | 1 | 19766 | 20035 |
| APD21795.1 | KY065453_p43 | head-tail adaptor | phrog_1951 | head-tail adaptor | connector | 1 | 20306 | 20605 |
| APD21755.1 | KY065453_p3 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 1971 | 2354 |
| APD21774.1 | KY065453_p22 | hypothetical protein | phrog_1681 | unknown function | unknown function | 1 | 8626 | 8790 |
| APD21790.1 | KY065453_p38 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 16830 | 18032 |
| APD21787.1 | KY065453_p35 | terminase small subunit | phrog_361 | terminase small subunit | head and packaging | 1 | 14471 | 14863 |
| APD21754.1 | KY065453_p2 | hypothetical protein | phrog_2700 | unknown function | unknown function | -1 | 1519 | 1926 |
| APD21796.1 | KY065453_p44 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 20602 | 20961 |
| APD21772.1 | KY065453_p20 | hypothetical protein | phrog_1174 | unknown function | unknown function | 1 | 8272 | 8499 |
| APD21753.1 | KY065453_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1149 |
| APD21800.1 | KY065453_p48 | tail tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 22579 | 25329 |
| APD21767.1 | KY065453_p15 | hypothetical protein | phrog_1555 | unknown function | unknown function | 1 | 6075 | 6374 |
| APD21770.1 | KY065453_p18 | DNA replication protein | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 7293 | 8063 |
| APD21760.1 | KY065453_p8 | DNA binding protein | phrog_1468 | transcriptional repressor | transcription regulation | 1 | 3609 | 3812 |
| APD21775.1 | KY065453_p23 | hypothetical protein | phrog_1638 | unknown function | unknown function | 1 | 8780 | 8989 |
| APD21791.1 | KY065453_p39 | prohead protease | phrog_80 | head maturation protease | head and packaging | 1 | 18016 | 18591 |
| APD21777.1 | KY065453_p25 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 9280 | 9783 |
| APD21783.1 | KY065453_p31 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 11959 | 12369 |
| APD21792.1 | KY065453_p40 | capsid protein | phrog_10 | major head protein | head and packaging | 1 | 18588 | 19754 |
| APD21780.1 | KY065453_p28 | hypothetical protein | phrog_884 | unknown function | unknown function | 1 | 10228 | 10488 |
| APD21765.1 | KY065453_p13 | hypothetical protein | phrog_668 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 5396 | 5653 |
| APD21763.1 | KY065453_p11 | hypothetical protein | phrog_2542 | unknown function | unknown function | -1 | 4193 | 4618 |
| APD21799.1 | KY065453_p47 | hypothetical protein | phrog_709 | unknown function | unknown function | 1 | 21883 | 22302 |
| APD21771.1 | KY065453_p19 | hypothetical protein | phrog_1580 | unknown function | unknown function | 1 | 8078 | 8272 |
| APD21773.1 | KY065453_p21 | hypothetical protein | phrog_5262 | unknown function | unknown function | 1 | 8492 | 8596 |
| APD21757.1 | KY065453_p5 | hypothetical protein | phrog_4194 | unknown function | unknown function | 1 | 3020 | 3157 |
| APD21756.1 | KY065453_p4 | transcriptional regulator, Cro/CI family | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2367 | 2732 |
| APD21784.1 | KY065453_p32 | transcriptional activator | phrog_36 | transcriptional regulator | transcription regulation | 1 | 12506 | 12907 |
| APD21788.1 | KY065453_p36 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 14856 | 16586 |
| APD21804.1 | KY065453_p52 | hypothetical protein | phrog_1137 | unknown function | unknown function | 1 | 35241 | 35444 |
| APD21786.1 | KY065453_p34 | nuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 14014 | 14334 |
| APD21764.1 | KY065453_p12 | hypothetical protein | phrog_463 | anti-repressor | transcription regulation | 1 | 4672 | 5382 |
| APD21798.1 | KY065453_p46 | major tail protein | phrog_88 | major tail protein | tail | 1 | 21293 | 21871 |
| APD21805.1 | KY065453_p53 | hypothetical protein | phrog_1164 | unknown function | unknown function | 1 | 35447 | 35797 |
| APD21768.1 | KY065453_p16 | hypothetical protein | phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 6365 | 7153 |
| APD21803.1 | KY065453_p51 | hypothetical protein | phrog_4793 | unknown function | unknown function | 1 | 35144 | 35260 |
| APD21766.1 | KY065453_p14 | lipoprotein | phrog_1490 | lipoprotein | other | 1 | 5739 | 6059 |
| APD21778.1 | KY065453_p26 | hypothetical protein | phrog_2003 | unknown function | unknown function | 1 | 9783 | 10070 |
| APD21806.1 | KY065453_p54 | holin 1 | phrog_199 | holin | lysis | 1 | 35806 | 36222 |
| APD21808.1 | KY065453_p56 | lytic amidase | phrog_1110 | endolysin | lysis | 1 | 36562 | 37518 |
| APD21769.1 | KY065453_p17 | hypothetical protein | phrog_2108 | unknown function | unknown function | 1 | 7141 | 7299 |
| APD21785.1 | KY065453_p33 | site-specific recombinase | phrog_216 | integrase | integration and excision | 1 | 13095 | 13637 |
| APD21797.1 | KY065453_p45 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 20958 | 21281 |
| APD21794.1 | KY065453_p42 | hypothetical protein | phrog_2550 | unknown function | unknown function | 1 | 20038 | 20319 |
| APD21782.1 | KY065453_p30 | membrane protein | phrog_2169 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 11564 | 11947 |